Pangasianodon hypophthalmus (striped catfish): 113539498
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Entry
113539498 CDS
T05759
Symbol
nfasc
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113539498 (nfasc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phyp04515
]
113539498 (nfasc)
Cell adhesion molecules [BR:
phyp04515
]
Immunoglobulin superfamily
L1 family
113539498 (nfasc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_6
Ig_5
Ig_VEGFR-1-like_5th
Motif
Other DBs
NCBI-GeneID:
113539498
NCBI-ProteinID:
XP_026791048
LinkDB
All DBs
Position
Unknown
AA seq
1381 aa
AA seq
DB search
MWPQGQWAPLAVLSIIVLLWKEAAPIDVPPDPRIQQDLKQPPTIVKQSAKDYIVDPRDNI
IIECEAKGNPVPTFWWRRNGKFFNVEKDPRVSMRKRSGTLEISFRNGGKPEDYEGEYQCF
AMNDFGTAISNKTLLRVSKAPLWPKEVLEPVVISEGSPLVLACNPPPGLPPPKTFWMDSR
MMPIVQDARVSMGLNGDLYFSNVLAKDANTDYSCNARFLFTHTIQQKNPFILKVQTKEPY
NDTVYSPNDTYIYGARNIQESTPTFLSPVGISSTKMVLRGEELLLECIAAGVPTPEIKWF
KKGGDLPERKVKFENFHKTLSIVSVSDEDSGDYICMASNKMGSIRHTISVQVKAAPFWLH
KPSNLVLAPNENGQLQCLASGNPKPSIQWLVNGEPIESSLENPSREVVGDAIIFSSVQIG
TSAVYQCNASNEHGYLLANAFVNILDMAPRLLGPKNQLIKVIENKQAFLDCPFFGSPYPF
VRWFKNGQGIVPNGGKYSLHENGTLEIKRVRPEDEGTYTFVASNILGKAEDQVRLEVKEP
TRIVRAPENLSSNRGSVARFDCKIKHDSSLPITVTWLKNDKLLHFPWLSRFKKEEDSLSF
SNVQPDDEGTYTCTVTTELDQDSASARLTVLEDESLAPSKPSALADRPDPPQDLELSDLS
ARSVRLTWIPGNDNNSPITQFLVQYEENRWRPGEWQNLSSYAGDQNSVNLNLSPFVNYQF
RVIAINSVGQSRPSRPSARYQTSGAPPYVYPSGLKGWGTKKTNMEITWQPLLDNQRNGPD
LRYVVSWRRKDLEEEWNNITTTNTKHVVVDTDTYVPYEIKIQAVNDFGPGPESNIVIGYS
GEDRPVEAPGELRVSKLNSNKVNINWVPVEAKSINGEFKEYRLYYWREASLVKDLKVNKD
KKTKGFFSDVSQNSGVLMDLVPYSKYKMYMVVANNKFEGPHSNTVEFQTKEGLPGAPKFF
RIVQRDSSTIRLEWNKPLEPNGILIGYTLQYKTVNGTQEGNLQILSFFPNETEYTMRLPD
RFTRYKFYLSARTQVGSGEVYAEESPHFANEEDFVTSGTDPTGVVIDSTDALDAFATPLP
PFSPPPIPSTTITTSTTTTIAPTTDATPTTPAPTTPTTTTTTTTTTTTSTTTTTTTHPTL
PFMPAPHVKIWNLTVDANSDYANVSWKHNFPVDSSEFVLEFTLDSNGSMKSVLFKHEPPI
KLAGLIAGAKYRLRVYSHEQPSITSEYVTFETSGAYSTDQVDIATQGWFIGLMCAIALLI
LILLIVCFIKRSRGGKYPVRDKKDLPLDPVDHKDQDGSFDYQNENSSDEDNKPLQGSQTS
LDGNVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVRKDKEETEGNESSEATSPVNAIYSL
A
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgtggccgcaggggcagtgggctcctctggctgtgctgtcaatcattgtgctgctgtgg
aaggaggcggctcccatcgatgtccctccagacccaaggatccagcaggacttgaaacag
ccccctactattgtgaagcagtcagcaaaggactatattgtggatccccgagataacatc
atcattgagtgtgaggccaagggcaatcctgtaccaacattttggtggagacgaaatggg
aagttcttcaatgtggagaaggatccacgtgtgtccatgcggaaacgctcgggcacactg
gagatcagcttcaggaatggtggaaagcctgaggactacgagggagaataccaatgcttt
gctatgaatgactttggcactgccatttccaacaaaacactgctgcgtgtttccaaggca
ccgctgtggcctaaagaggttttggagccagtggtaataagtgagggatcacctcttgtc
ctggcctgtaacccacctcctggccttccgccacctaaaacattttggatggacagtaga
atgatgcctatagtgcaggatgctcgagtgtccatgggcctgaatggagatctttacttc
tctaatgtgcttgctaaggacgctaacactgactacagctgcaatgcccgttttctcttc
acacacaccatccaacagaagaatccttttatcctcaaagtgcagacaaaagaaccttat
aatgacactgtttactctccaaacgacacttacatatacggtgcacgtaacattcaagaa
tcaacacctacctttctctctcctgtgggaatatccagcaccaagatggtgctccgcgga
gaggagcttctcctggaatgtatagctgctggagttccaactcctgaaatcaaatggttt
aagaaaggaggggatttgccagagagaaaggtcaaatttgagaacttccataagaccctg
tctatagtttctgtgtcggacgaggattctggagactacatctgcatggccagtaataag
atgggcagcatccgccacactatctccgttcaagttaaagctgctcctttttggctacat
aagccatctaacctcgtgctagcacccaatgagaatggccagctgcagtgtttagccagt
ggaaaccccaaacctagcatccagtggcttgtgaatggagagccgatagagagctcactg
gaaaatccaagcagggaggtggttggtgatgcgatcattttcagctcagtgcaaattggc
accagcgctgtataccagtgcaatgcctcaaacgaacatggctacctgctggctaacgca
tttgtcaacatactggatatggcaccccggttattgggacccaagaaccagctgattaag
gtgatcgagaacaaacaagcctttctggattgccctttttttggctcaccttacccattt
gtgcggtggtttaagaatggccagggtatagttccgaatggtgggaagtacagcttgcat
gaaaatggtaccctggagatcaagcgagttcgacctgaagatgagggaacttacactttt
gtggcaagcaacatcctgggcaaagctgaagatcaggtccgtttagaagtcaaagagccg
acgcggattgtccgagctccagagaacctctcctccaatagaggaagtgtggctcgtttt
gattgcaagattaaacacgattcctcactccccattactgtcacctggctcaaaaacgac
aagctcctgcattttccttggctgagcaggtttaagaaggaggaggactcattgtccttt
agcaacgtccagcctgatgatgagggaacatacacttgtacagttactacagagttagac
caggactctgcctcggcccggcttactgttttagaggatgaatccctagctccctcaaaa
cctagtgccttagcagatcgtcctgatcctcctcaggatctggagctgtctgatctttca
gcacgctccgtccggctcacctggatccccggcaatgacaacaacagtcctattacacaa
ttccttgttcagtatgaagagaaccggtggagaccaggcgaatggcaaaatctgtccagt
tacgcaggtgatcagaactctgtgaacctgaatctgtctccgtttgtgaactaccagttc
agagtgatcgcaatcaacagtgtgggtcagagccgaccgagccggccatcagcccgctac
cagaccagcggagcacctccttatgtttatcccagtggccttaaagggtggggtaccaag
aaaaccaacatggagatcacttggcagcccctacttgataaccaaaggaatggtcctgat
ctacgttatgtggtctcctggaggaggaaggacttggaggaggaatggaataacatcacc
actaccaatacgaagcatgtggttgttgatacagatacttatgtcccctatgagatcaag
atccaggcagtcaacgactttggtccaggccctgagtcaaacatagtgattggctactca
ggggaggacaggcctgtggaggcacctggagagctcagggtatcaaagttaaacagcaat
aaagtgaatataaactgggtccctgttgaggcgaaatccattaatggagagtttaaagag
tacaggctatattactggagggaggccagcttggtgaaagacttgaaggtgaataaggac
aagaaaacaaaaggtttcttcagcgatgtgtctcagaacagtggcgtccttatggacctc
gtcccttacagcaaatacaagatgtacatggtggtggccaacaacaaatttgagggacca
cacagcaacactgtggagtttcagaccaaggaaggcttgccaggggctcctaagttcttc
aggattgtccagagggacagcagcaccattcgtctagagtggaataagcctctagagccg
aatggcattctgatcggatacacactccaatacaagacagtgaatgggacacaggagggc
aatctacagatcctgagcttcttccctaatgagacagagtacaccatgcgcttacctgac
cgcttcacccgctacaagttctacctgtctgctcggacgcaggtcggctctggtgaggtc
tatgctgaggaatcgcctcactttgccaatgaagaagactttgtgacttcaggtactgac
cctacaggtgtagtaatcgattctacagatgccttggatgcctttgcaactcctcttccc
cccttttccccacctcccatcccaagtacaaccattacaacctcaacaactaccaccatt
gcccctacaactgatgccacccccactactcctgctccaactactccaacaacaacaact
actacaactacaactaccactaccagtactaccaccaccactacaacccaccccaccctg
cctttcatgccggccccgcatgtaaagatctggaatctgaccgtggatgctaacagtgac
tatgctaacgtcagctggaagcacaacttcccggttgacagcagcgagtttgtgctagag
ttcacactggacagtaatgggtctatgaaaagtgtgctgttcaaacatgaaccccccatt
aagctggctgggttgatagctggagctaagtaccggctccgtgtgtattcccacgaacag
cccagcatcaccagcgagtatgtcaccttcgagaccagtggagcctacagtacggaccaa
gtcgacattgccacgcagggttggttcattggtctcatgtgtgccattgcactcctcatt
ctcatcctgctcattgtttgctttatcaaaagaagccgaggagggaaatatccagtgaga
gacaaaaaagacctccctttggaccctgtggaccacaaagaccaggatggatcatttgat
taccagaacgaaaacagcagcgatgaggacaacaagcctttgcagggaagtcagacctct
ctagacggcaatgtcaaggaaagtgacgacagtctagtagactacggagagggaggggat
ggccagttcaatgaggacggctccttcataggccagtacacagtcaggaaggataaggag
gagacggagggcaatgagagctcagaggccacatcacctgtcaatgccatctactctctg
gcgtag
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integrated database retrieval system
