Pangasianodon hypophthalmus (striped catfish): 113539503
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Entry
113539503 CDS
T05759
Name
(RefSeq) uncharacterized protein LOC113539503
KO
K05453
macrophage colony-stimulating factor 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04010
MAPK signaling pathway
phyp04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113539503
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
113539503
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
phyp04052
]
113539503
Cytokines and neuropeptides [BR:
phyp04052
]
Cytokines
CSF and other factors
113539503
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSF-1
CD34_antigen
EC042_2821
Sha_B_N
Motif
Other DBs
NCBI-GeneID:
113539503
NCBI-ProteinID:
XP_026791070
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MNTHTTAHKAKIRHLCSCLVLCLHLVSGAVPGPCGHSVTEEHLLTLRKLIINQVQNGCSI
TYSFTEHQNLSEVCHIKAAFPHILDLLNTHFTYEKGSDNYRYTSSLKDLIYHIYSQKCIP
PINEEIEENPVKFARLYTSLPREGLQKTEEVFQMYKRLMSTSDKPVNWNCEDEYANNVPE
STTALYPQATGTPECQCSCPDPMKAFMFTRSIPTASPSSLHTQSGAYIFRNKNEASSAPD
PAVKDEAPNSTQNQISAISQTSTNFITFTTRNLMDNSSDSSVPMRSEPQSVTSSPIASSS
ELPSIPTRAPLQSATSQPSEKINTPLISDSNPVLVLAKRSLDTREQGMLSDSFSKLLQRW
ITEIVGLKKNKMVKPLEITPGETENPPVEHVEQNSPTHLQMHLHKAKSLPGNVFKIISNE
PDCKDSRCQTDTEDRSEQRPRDRVKRHSVEKEYQLIHSSLYTTFLITSVCLLLLFITVLF
YCKQQRIKDLQKEDRTIHF
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacacacaacagcccacaaggccaagataaggcatctgtgctcctgccttgtc
ctgtgcttgcacttggtctctggtgcagtacctggtccatgtggacattctgtgactgag
gaacatctcctgactttaagaaaactgattataaaccaagtccaaaatggctgctctata
acgtatagtttcactgaacaccagaacctgagcgaggtctgtcacattaaagcagcattc
cctcacatcctggaccttttgaacacacacttcacatatgaaaagggttctgataactat
cgctatacaagctcactaaaggacctgatctaccacatttattcccagaaatgcatccct
cctatcaatgaagagattgaggaaaatccagtgaagtttgcaagactgtacacgtctttg
cccagggagggtctacaaaaaacagaggaggtatttcaaatgtacaaaaggctgatgagt
acaagtgacaaacctgtaaattggaattgtgaggatgagtatgcaaataatgttccagaa
tccaccactgcactttacccccaagcgacaggtaccccagagtgccagtgctcttgccct
gaccctatgaaggcatttatgttcaccagatctattccaactgcatcaccttcatctctc
cacacccaatcaggagcatacatcttcaggaacaagaatgaagcatctagtgcacctgac
cctgcagttaaagatgaagcaccaaactcaactcaaaatcagatttctgcaatttcacaa
acttctacaaacttcattactttcaccactcgaaatttgatggataacagcagtgattct
tctgtaccgatgaggagtgagccacaatcagttacatcctcgcccattgcatcatcaagt
gaattaccaagcataccaacaagagctcctctccaatcagcaacatcacagccctctgaa
aaaataaacacaccactaatttctgatagcaacccagtgctagtacttgccaagaggtct
ttagataccagagagcaaggaatgctgtctgattccttctccaaactgctccagaggtgg
attactgaaatcgtaggacttaagaagaataagatggtcaaacctctagagatcacacct
ggagaaacagaaaaccctcctgttgaacatgttgaacagaacagtcctacgcacctccag
atgcatcttcacaaggccaagtccttaccagggaatgtgtttaaaatcatcagcaacgaa
ccagactgcaaagattccagatgtcaaacagacactgaagacagatcagagcagagaccc
agagatcgtgtaaagagacactcggtggaaaaagagtaccaacttatccacagctctctg
tacacaacgttcctgattacatctgtgtgcttattactactgttcatcactgtcctgttc
tactgcaagcagcaacggatcaaggatctacaaaaagaagacaggaccatacatttttga
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