Pangasianodon hypophthalmus (striped catfish): 113539519
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Entry
113539519 CDS
T05759
Symbol
magi1
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
113539519 (magi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
MAGI_u5
PDZ_2
MAGI_u1
WW
Guanylate_kin
DUF6288
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
113539519
NCBI-ProteinID:
XP_026791108
LinkDB
All DBs
Position
Unknown
AA seq
1689 aa
AA seq
DB search
MSKAMQKKNHWSARVSECAVRRDARGDINVPLQGGAENGEFVYVGRVDPGSISYDHGTLT
EGELLLEVDTLPVSGLPLYDVLSAVKNSKGPVRLKTVRQGNKLNKDLKHYLSQRFQKSSE
DHKLQQTIRDNLYRHAVPCTTRLPRDGEVPGVDYNFLSVEDFLKLEQSGTLLEIGSYEGN
YYGTPKPSSQPPAAKVIGGEASPNDRPGPQETTPRRSKSYNEMQNAGIAPADTEDEDELP
EMNSSFTGDSSEPDEHPSVRPFAPSHRFNSAPTAATESTQNTHTHPSHPTDEDPLGPLPE
NWEMAYTENGEVYFIDHNTKTTSWIDPRCLDKPQKPLEECDDDEGVHTEELDNDLELPTG
WERIDDPVYGVYYVDHINRKTQYENPILEAKRKKQLEQSQPAEEWIEENASRAPLASYAT
MHQEMHRSPEPPFPPVGAKRVKPFFTRNPAELKGTFINTKLKKSRRGFGFTVVGGDEPDE
FLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGYTHAQVVKIFQSIPIGSMVDLELCR
GYPLPFDPDDPNTSLVTSVAIVDKEPIIVNGQESYDSPSSHGSHNGTASEPPRPLSPAHE
PTPDGSQEQRFAGDAVTLASSIATQPELITVHMEKGDKGFGFTIADSPGGGGQRVKQIVD
YPRCRGLREGDIIVEVNKRNVQNLTHNQVVDLLSKCPKGSEVTMLVQRGVAPAKKSPKLQ
PLERKDSQGSHRSVPSDSPLHSSQAPSTETAAPPPPAQPLPGLPPQEPATDGTLAKKPDP
FKIWAQSRSMYESRLPDYQEQDIFLWRKDTGFGFRILGGNEPGEPIYIGHIVKYGAADED
GRLRSGDELICVDGTAVVGKSHQLVVQLMQQAAKQGHVNLTVRRKTGYGVAKVEGEVPPS
PASSHHSSTQAASLTEDKRTPQGSQNSLNTVSSGSGSTSGIGSGGGGGGGGNSSVVPSAI
QPYDVEIRRGENEGFGFVIVSSVSRPDAGTTFAGNTCVAMPHKIGRIIEGSPADRCGKLK
VGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDESSNAALLTNAEKIATITTT
HTPQQQAAPEPRNNSKPKQESFEFKAPQVPPPPAPTQATNQEGELYSVDLERDSKGFGFS
LRGGREYNMDLYVLRLAEDGAAVRSGKMRVGDEILEINGESTKGMKHTRAIELIKSGGRT
AHLVLKRGDGSVPEYDGNDDNNGPVSGAQTVSEVNTAPPDSQPHPPLDSSSPQDLHKTSR
NEDRRTRESGQRTHGHRSNHHHSNHRHRSPDKRGRNRHHNKKSSSSANKKRGEKRYSKDD
SYHHQHHRRHHSPERRRRARSAENTLDSRHERRYGRSPERRHHRHSSPQRHHSPHRSGHR
HRSPHRHRSPYRSPHRSRYHSPHRQSNPSSDRPRNGKPQRDEDVGLKEPPSPETSSHLDS
VLNELPAMDRLNRESPLPRMTYDGLERGNGLTLPGKSYSRLNSNTTLPRQFVNNGNSLPH
FYDRWNRDDVNPRQSYGHLNHDDTLPRPSYDRVNRNEALRRESYDSLPQSVPFPRESTDH
FSTMERSYNGDSLPRRTYQDQSLPRIRTPDSDTAFQKYSSLLRGRSPERKSRLSRSETPE
ATSYRARSLDPDMLPARGSRNTVDSEEEDKESSVRNYYSKLKSNYGKVNNPLPEPRRKAY
KENSKDLSI
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagcgatgcagaaaaagaaccactggagcgcgagagtgagcgagtgcgcggtg
cgccgggacgcgcgcggggacataaacgtgccgctgcagggcggagcggagaacggagag
ttcgtgtacgtgggccgcgtggatcccggctccatcagctacgaccacggcactctgacc
gagggagagctgctgctggaggtggacacgctgcccgtgtcgggattaccgctgtacgac
gtgctgagcgccgtgaagaactccaaaggacccgttagactcaaaaccgtacgccaagga
aataagctgaataaggacctcaaacactatctgagccagaggtttcagaaatcttcagaa
gaccacaagctccagcagaccatacgggacaacctctaccgccatgctgtgccttgtacg
acccgccttcctcgagacggagaggttcccggagtcgattataacttcctctcggtggag
gacttcctgaagctcgagcagagcgggacacttctggagatcggctcttacgaaggtaac
tactatggaacacccaaaccatcgagccagccccccgctgctaaagtgattggcggagag
gcgtcgcccaacgacaggcccggcccccaggagaccacgccccgccgctccaagtcctac
aatgagatgcagaatgctggaatagcccccgccgacacagaggatgaggacgagcttcct
gaaatgaacagcagcttcacaggagactcgagtgaaccggacgagcacccctctgtccgc
cccttcgccccgtctcaccggttcaacagcgcaccgacggcagccacggagagcacgcag
aacacacacacacaccccagccaccccacggacgaggaccccctgggccctctacctgaa
aactgggagatggcttacaccgagaacggcgaggtctacttcatagaccacaacacaaag
accacgtcatggatcgaccctcggtgcctggacaagccccagaaacccctggaggagtgt
gacgatgacgaaggggttcatactgaggaactggacaatgatctagagttgcccaccggc
tgggaaaggatcgacgatcccgtgtacggggtttattacgtggatcacatcaacagaaag
acgcagtatgagaatcccatactagaagctaagaggaagaagcagttggagcagtcgcag
cctgcagaagagtggatagaagagaacgcttcaagagcaccgctagccagctacgccacc
atgcaccaggagatgcacagaagccccgagcctccttttcccccagtaggggccaaacgg
gtgaagcctttcttcacacggaatccggccgagctgaagggaacgttcattaacactaag
ctgaagaagagccgccgtggttttggtttcacggtggtcgggggagacgagccggacgag
ttcctccagattaagagtctggtgctggacggcccggccgctctggacggcaagatggag
acaggtgacgtaatcgtcagcgtaaacgacacttgcgtcctgggctacacgcacgcacag
gtggtaaagatcttccagtccattcctatcggttccatggtggacctagagctgtgccga
ggctacccgctgccctttgaccctgacgatcccaacaccagcctggtgacctcggtggct
atcgtggacaaagagcctatcatcgtcaatggccaagaaagctacgactcgccatccagc
cacggcagccataacggcactgccagcgaaccccctcgccccttaagccccgcccacgag
cccacccccgatggttcacaggagcagcgtttcgccggcgatgccgtgaccctggcgtcg
tccatcgccacgcagccagagctgatcacggtgcacatggagaaaggagacaagggcttt
ggcttcaccatcgcagacagcccaggaggtggcggccagcgtgtcaagcagatcgtggat
tacccacgatgccgagggctcagggaaggtgatatcatcgtggaggtgaacaagaggaat
gtgcagaatcttactcacaaccaggtggtggatctgctcagcaagtgccctaaaggcagc
gaagtcaccatgctggtccagagaggggtggctcctgccaagaaaagcccaaaactgcaa
ccgctggagagaaaagacagccagggtagccaccgcagtgttccctcagactcgcctctc
cactcctcgcaggctccatccacagagacggcggctccgcctccccccgcccagccgctg
cccggcctgccccctcaggagccggcaacagacggcacgctcgccaagaaaccggacccg
ttcaaaatttgggcccagtccaggagcatgtatgaaagtaggctgccagattaccaggag
caggatatctttctgtggaggaaggatacaggcttcggtttccggatcctcggagggaat
gaaccaggagagccaatttacattggccacattgtgaagtatggcgctgcagacgaagac
gggcgtctgcgctctggagatgagctgatctgcgtggacgggacggctgtggtgggcaaa
tcccatcagcttgtggtacagctcatgcagcaggcagccaagcaaggccacgtcaacctg
actgtcagacgcaagacaggatatggagttgcgaaggtggaaggtgaggttcctccgtct
ccggcctcgtcccatcacagcagtacccaggccgcatctctgaccgaggacaagcgcacg
cctcagggcagccagaactctctgaacacggtcagctcgggctctggctccaccagcggc
atcggcagcggtggcggtggcggtggcggaggcaacagcagcgtggtgcccagtgcaatc
cagccatatgacgttgagatccggcgtggagagaacgagggcttcggttttgtcatcgtc
tcgtctgtctccagacccgacgcggggacgacattcgctggaaacacatgtgtggccatg
cctcataaaatagggaggatcatcgagggcagtccggcagaccgctgcgggaagctgaag
gtgggagatcgcatcctcgccgtcaatggctgctccatcaccaacaagtcccactcggac
atcgtcaacctcatcaaagaggcgggaaacacggtcacgctgcgcatcattccaggagac
gaatcctcaaacgcagcgctgctgacgaacgccgagaagatcgccaccatcactaccaca
cacacacctcaacagcaagctgcacctgagccaagaaacaacagcaaaccaaaacaggag
tctttcgagttcaaagcgcctcaggttcctcctccgccagcccccacacaagctacaaac
caggagggggagctgtactcagtggacctggagagagacagtaaaggctttggcttcagt
ctgcgtggaggacgcgagtacaacatggacctgtacgtgctgagactggccgaagacgga
gcagcagtgcgcagcggcaagatgagggtaggagatgagattttggagattaatggagag
agcaccaaaggcatgaagcacacccgtgccatcgagctgatcaagagcggaggccggacg
gcgcacctcgtgctgaagcgcggtgatggctctgtacccgaatatgacggcaacgacgac
aacaacggccccgtcagcggggctcaaactgtttcggaagtgaacacagcacctcctgac
agtcagccccacccgccattggattccagctctccacaagaccttcataaaacatcccgg
aatgaggacaggaggacacgcgagtcaggtcagcgcacgcacggccaccgctccaaccat
caccatagcaaccacagacaccgctccccagacaaaaggggcaggaacaggcaccataat
aagaaaagtagcagcagtgctaataagaagagaggcgagaagaggtacagcaaggatgat
tcgtaccaccatcagcaccaccggaggcaccattctccagagaggaggcgccgggcaagg
agcgccgagaacaccctggacagccgacacgaacgtcggtacggccgatcaccagaaaga
cgccatcatcgccactcctctcctcaaaggcaccattcaccacatcggtcagggcaccgc
cataggtcccctcaccgtcacagatcaccatatcgctccccacatcgctccagataccat
tctccgcatcggcaatccaacccttcttctgacagaccgcgcaatggcaaaccacagcgg
gatgaggatgtcggcttgaaggagcctccatctcctgagacttcttcccacttggacagt
gttctgaatgagctgcctgcaatggatcggctaaaccgcgagagccccttgccacggatg
acatatgatggtttagaacgtggcaacggcctgacattaccaggaaagtcctacagtcgt
ctgaacagtaacaccaccctcccccgacagtttgtaaacaatggtaatagcctcccgcat
ttctatgatcgttggaaccgtgatgacgtcaacccccggcagtcctatggccacttgaac
catgatgacacactaccccgaccgtcatatgaccgtgtgaacagaaatgaagctcttcgc
cgagagtcctacgacagtttgccccaaagcgttccttttcccagagagtcaacggaccac
ttttcgacaatggagcgctcatacaatggggacagcctgcccaggagaacctaccaggac
cagagccttccccgcatcagaacccctgactcagatacagctttccagaagtacagttcg
ctgttaaggggtcgctctcccgagagaaagagccgattatcccggtcggagactccagaa
gcaacctcctacagagccaggagccttgacccagacatgttgcctgcaagaggttcccga
aacacggtagactcagaggaggaagacaaggaaagcagtgtaagaaattactacagcaaa
ctcaagtccaattatggcaaagtcaacaacccactccccgagcccaggaggaaggcctac
aaagagaactccaaagatctcagcatctga
DBGET
integrated database retrieval system
