KEGG   Pangasianodon hypophthalmus (striped catfish): 113539535
Entry
113539535         CDS       T05759                                 
Symbol
zc3h11a
Name
(RefSeq) zinc finger CCCH domain-containing protein 11A isoform X1
  KO
K22415  zinc finger CCCH domain-containing protein 11
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phyp03019]
    113539535 (zc3h11a)
Messenger RNA biogenesis [BR:phyp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     113539535 (zc3h11a)
SSDB
Motif
Pfam: zf-CCCH_3 zf_CCCH_4
Other DBs
NCBI-GeneID: 113539535
NCBI-ProteinID: XP_026791138
LinkDB
Position
Unknown
AA seq 822 aa
MTSMSNKGDDCYFYYYSTCTKGDTCPFRHCEAAMGNETVCSLWQENRCFRNVCKFRHMDI
KKNRKEIPCYWENQPGGCQKFHCAFHHEKPRFIDGLFVAADKGPVVRKEKEEETPQDDHV
LSASANISNTTNPQLRGVIKVETQESVPSPTHPPVVINPVDDEDDEDVDQFSEEGEEASG
VSPKKLLSSSKDESLNFGIKTLEEIRLGKALKASLNRPGPDEFTSTKRHSSGTGTEKETI
QSVTQAAVVTTSESPALEDSGKRKITDRLGKRSDEDLLVEGGLRLKGSLAKRLGGFVDST
ENKISMPPQKVKTLRPVRERLGVTPDITAPKSPNSEPKSSGEIRIKTLEEIRQEKAAKSQ
MQCKSVRVEVPTNALNSTKKVNKPVTAPSVKTFSEILREKKLQETKVVPQQGSTEKTEGP
ANAGVIKLTAQAAEIRVKTLEEIRKEKAARMQAKTQDTTNDDAPSSSDAVPKRRILCIGK
TGSAINIRSQKVHSSEKPDCIEESTVTNGKSDTSIQDVTVKSFEEIMREKRLRKQQEQAA
STVEPEQAAQKPIPVLCEKKPPAVIRPGITNQANSSIQQGISHQASSPVPSVVPQRKSPE
MQNKENSLTISPKKSKSSSSMAPPVQVSEMADSLGQHSQEPHWENTQAVTKMPPSKAAEL
KVRPKLNVKPSVMKPAAQVKPGPKRKAAGIHCSAVAAVKPLNAAPAPDVEPPCKRTQLSA
PSCSLEVEARAQQVSPPAEQCSPEPLSVPQSPIIKTPTQTRPRRASLASARGTTPAGNSS
TMDDFDDLLDEFTDDRLEDEIELDPGKGEDDLLLELSEMIDS
NT seq 2469 nt   +upstreamnt  +downstreamnt
atgaccagcatgagcaataagggagatgattgctatttctactattattcaacatgcact
aagggtgatacttgccctttccgacattgtgaggctgccatgggtaatgagactgtctgc
agtctttggcaggagaaccgttgctttcgcaatgtatgcaaattccgtcacatggatata
aagaaaaaccgcaaagaaatcccttgttactgggaaaatcagccaggcggatgccaaaag
tttcattgtgcttttcaccatgagaagccacgtttcattgatggcctttttgttgccgca
gacaaagggcctgtggtgaggaaggaaaaagaggaagaaactccacaggacgaccatgtt
ttgtctgcttctgccaacatttccaacaccaccaacccacaactcagaggggtcatcaag
gtagagactcaagagagtgtccccagtcccacacacccaccagtagtcattaatcctgtg
gacgatgaggatgacgaagatgtagatcagttttctgaagagggagaggaagcttctggt
gtctctccaaagaaactgctgagctctagtaaagatgagtcgctgaattttggtatcaaa
acactagaagagatcaggttggggaaagctctgaaggccagtctaaacagaccaggccct
gatgagttcacctcgacaaaacggcatagcagcggaactggcacagagaaggaaaccatt
caatctgtcacacaggcagcagttgtcactaccagtgagtctcctgctttggaggactcc
ggaaaaaggaaaattactgacaggcttggaaaaagatctgatgaagacctgcttgtggaa
ggtggtctacggctgaaagggtcccttgctaagcgtcttggtggatttgttgactccact
gagaataaaatcagtatgcctccccagaaagttaaaactctgagaccagtgcgtgaaaga
cttggagtaactcctgatatcactgcacccaagtcaccaaacagtgagccaaagtcttct
ggtgagatccggatcaaaactcttgaggagattcgtcaggaaaaggctgctaaatctcag
atgcagtgcaaaagtgttagagttgaggtccctacaaatgcattaaattccaccaaaaaa
gtaaataagcctgtcactgcgcctagtgtaaagactttctcagagatcctgcgtgagaag
aaactccaggagacaaaggtggtgcctcagcaaggtagtactgagaaaaccgagggccct
gcaaatgctggagtgatcaaactgactgcccaagcagcagagatcagagtgaaaacgctt
gaagagattcgtaaagaaaaagctgccagaatgcaagcaaagacacaggacacaacaaat
gatgatgcacctagttcaagcgatgcagtcccaaaaagacgaattctttgcattggcaag
actggatcagctatcaacatcagatctcaaaaagtgcacagttctgagaagccggattgc
attgaagagtccactgtaaccaatggaaagagtgacacctccattcaggatgtaacggta
aagagctttgaggaaatcatgcgagagaaaagacttcgcaagcaacaggagcaggctgca
tctactgttgagccagagcaagctgcccagaaaccaatcccagtactttgtgaaaagaag
cctcctgctgtcatcagaccaggaataaccaaccaagcaaattcgtccatacaacaaggc
attagtcatcaggcctcctctcctgtcccttctgtggtaccccagaggaagtctccagag
atgcagaacaaggagaactctcttaccataagtcctaagaaatccaagtcatcctcttca
atggcacctcctgtgcaagtgtcagagatggcagattctttaggccagcattcacaggag
ccacattgggagaacactcaagcagtcaccaagatgcccccaagcaaagcagctgaatta
aaagtgaggccaaaactgaatgtaaagccatcagtgatgaagccagctgctcaggtgaaa
cctggcccaaaaaggaaagctgcaggtatccattgctctgctgtcgctgcagtgaaacct
cttaatgctgcccctgctcctgatgttgaaccaccttgcaagcggactcagttgtctgca
ccatcctgcagtttagaagttgaagccagggcgcagcaggtgtcacctcctgctgagcag
tgctcacctgagcccctttctgttccacaaagccccatcattaagactcccacccaaact
cggccacgtcgggcaagtttggcttctgcacgtggcactactcctgcaggaaactcctcc
acaatggacgactttgacgacctgctggatgaatttactgatgacagactggaggatgag
attgaactggaccctggcaaaggcgaggatgacctcttgttggagctttctgagatgatt
gacagctaa

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