Pangasianodon hypophthalmus (striped catfish): 113539545
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Entry
113539545 CDS
T05759
Symbol
rrh
Name
(RefSeq) visual pigment-like receptor peropsin isoform X1
KO
K04253
visual pigment-like receptor peropsin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
phyp04030
]
113539545 (rrh)
G protein-coupled receptors [BR:
phyp04030
]
Rhodopsin family
Vision
Opsin
113539545 (rrh)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7tm_2
Motif
Other DBs
NCBI-GeneID:
113539545
NCBI-ProteinID:
XP_026791154
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MGPEILNSSNETVSYGGKSAFSQMEHNIVAGYLIAACVISLSSNLVVLIMFVKFKELRNA
TNAIIINLAFTDIGVAGIGYPMSAASDLHGSWKFGYTGCQIYAALNIFFGMASIGLLTVV
AIDRYISICRPDIGQKMTIHSYTLLVMAAWLNAVFWSAMPVVGWAGYAPDPTGATCTINW
RNNDASFISYTMAVISVNFIIPLSVMFYCYYNVSVTMKRYKASNCLDSINIDWSDQIDVT
KMSIVMIVMFLVAWSPYAIVCLWASFGDPRKIPAPMAIIAPLFAKSSTFYNPCIYVIANR
KFRRAIVGMLRCQTRRHVTINNQVPMTISQLPLNQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgggacccgaaatcctaaattcctcaaacgaaaccgtcagctatggtgggaaaagtgcc
ttctcgcaaatggaacacaacattgttgcgggatacctcattgctgcatgtgtgatcagt
ttgtccagtaaccttgtggtgctgattatgtttgtaaagtttaaagaactgcgtaatgcc
actaatgccatcatcattaatctggctttcactgatattggagtagcaggcattggttac
cccatgtctgctgcttctgacctgcatggcagctggaaattcgggtacactggttgccag
atctacgctgccctgaatatattctttgggatggccagcattggactgcttactgtggta
gccattgatagatatataagtatctgcagacccgatataggccagaagatgacgatacac
tcatatacactgttggttatggctgcatggctcaatgcagtgttctggtctgccatgcca
gttgtgggttgggctggatatgctcctgatccaactggagccacatgcaccatcaactgg
aggaacaatgatgcgtcctttatctcctacacgatggctgtgatttccgttaactttatc
ataccactgtctgtcatgttctattgctattacaatgtttcagtcaccatgaagaggtac
aaggcaagcaactgcctggacagcattaacattgattggtcagatcagatagatgtaact
aagatgtctattgtgatgattgtgatgttcttggtggcctggtctccatacgctattgta
tgtctttgggcatcatttggtgatcctagaaagattcctgcaccgatggccatcatcgca
ccactctttgcaaagtcttccaccttctacaatccctgcatctatgtcattgccaacagg
aagttcagaagagccattgtggggatgctgcgatgccagacccgacgacatgtcaccatc
aacaaccaagttcctatgacgatctcacagttgcctcttaaccagtga
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integrated database retrieval system
