Pangasianodon hypophthalmus (striped catfish): 113539559
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Entry
113539559 CDS
T05759
Name
(RefSeq) red-sensitive opsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
phyp04030
]
113539559
G protein-coupled receptors [BR:
phyp04030
]
Rhodopsin family
Vision
Opsin
113539559
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srsx
7TM_GPCR_Srt
7TM_GPCR_Srv
Motif
Other DBs
NCBI-GeneID:
113539559
NCBI-ProteinID:
XP_026791184
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MAEQWGEAMFAARRRGDDTTREAAFVYTNSNNTRDPFEGPNYHIAPRWVYHLATLWMFIV
VIASTFTNGLVLVATAKFKKLRHPLNWILVNLAIADLLETLFASTVSVCNQIYGYFVLGH
PLCIFEGFTVACCGIAGLWSLTVISFERWVVVCKPFGNVKFDGKWAAGGIIFTWVWSAFW
TALPIFGWSRYWPHGLKTSCGPDVFSGSEDPGVQSYMIALMITCCIIPLAVIILCYLAVW
MAIRAVAAQQKESESTQKAEKEVTRMIFVMIAAYVFCWGPYTFFACFAAANPGYAFHPLA
AAMPAYFAKSATIYNPIIYVFMNRQFRSCIMQLFGKKVDDGSEVSSTSKTEVSSVAPA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcagtggggagaagctatgtttgcagccaggcggcgaggtgatgatacaaca
cgggaagcagcctttgtatacaccaacagcaataacaccagagatccatttgagggaccc
aactatcacattgccccaagatgggtgtaccatcttgcaacattatggatgtttattgtg
gttattgcctcaaccttcactaatggcctggtactggtagccacagccaaattcaagaag
cttcggcaccctctaaactggatcttggtaaaccttgcgatagccgatcttttagagaca
ctatttgccagcactgttagtgtctgtaaccaaatatatggctactttgtccttggacac
ccactttgcatttttgagggtttcaccgttgcttgctgtggtattgctggtttgtggtct
ctgactgtcatatcatttgagagatgggtggtggtgtgcaaacctttcggaaatgtaaaa
tttgatggtaaatgggcagctggtggcattatcttcacctgggtctggtctgcattttgg
actgcacttcctatctttggatggagcaggtattggcctcatggcctgaagacctcttgt
ggaccagatgtatttagcggaagtgaagaccctggagttcagtcttacatgattgcgctg
atgatcacctgctgcattatccccttggccgttatcattctctgctaccttgctgtgtgg
atggccatccgtgctgttgcagcacaacagaaggaatctgaatcaacacaaaaggctgaa
aaggaagtcaccagaatgatttttgtcatgattgctgcttatgttttctgctggggacca
tacactttctttgcctgctttgcagctgctaaccctggttatgcctttcacccactggca
gcagccatgcctgcctactttgcaaagagcgccaccatctacaaccccattatttatgtc
tttatgaaccgacagttccgttcatgcatcatgcagctctttggaaagaaggttgatgat
ggctctgaagtgtcttctacctccaaaacagaagtctcctctgtggcacctgcataa
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