Pangasianodon hypophthalmus (striped catfish): 113539626
Help
Entry
113539626 CDS
T05759
Name
(RefSeq) LOW QUALITY PROTEIN: sortilin-like
KO
K12388
sortilin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
113539626
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR
BNR_6
BNR_2
Motif
Other DBs
NCBI-GeneID:
113539626
NCBI-ProteinID:
XP_026791337
LinkDB
All DBs
Position
Unknown
AA seq
816 aa
AA seq
DB search
MRAVCWPGAVLLVSAALCLDLEHALSLNRRENTAFLSEWKSGFGLKDVAERKVRRSEESV
GESCHSLQDYEARLQEDTHTRVFNDVSGSVSLAWVGDGTGVLLVLTTYQVPLFMFRFSEP
KLYRSEDHGKSFQDVTYLLNSTLIMTHFGIAIGPDNSGRVILTGYVSEGKGSRILRSLDF
GRSFTPSDLPFQVLMQITYNPKNNSVLAVISTVYDLWLSEDFGLHWKRIHDTVCLVKWXN
THTYTHTHNELLIRSNSLCSERGMLELRKTTDFGRSFKTIGRRIYSFGLGGRFLFASVMS
ATSSMRMIHVSVDQGEVWDMAQLPNVGHEQFYSILSANDDMVFIHVDEPGDSGMGMIYVS
DNRGIVFSKSLERHLYTSTGGETDFTVVSSLRGVYMTSVLAHDGSVQTVVTFNQGGNWRS
LKKPWNAECDSTAKDPDMCSLHIHAAYSTSMRLNVPMLPLTEPSAVGLILAHGSVGDAVS
ILSPDVYVSDDGGYTWARALKGPHHYVMLDSGGLLVAVEHNPIQPIAQIKFSTDEGQCWH
VYNFTDTPLYFTGLASEPGARSMSLSLWGFRQPVFSQHLVSITIDFHQLLSKDCGEEDYV
QWLAHSDNTGNPNDGCLLGYKEKYLRLRKDSTCRNGRDFVITKQPTPCPCTLDDFQCDFG
YYRAMNSSECVEQPELKGHSLEFCLHGRKEQLQTSGYRKIPGDRCEGGTQPERKLIDLSK
KCVSNLLSPELLSESQSGSVAPVVSVIFLVLLVCAVAGVLLVKKYVCGGRFLVHRYSEMQ
RHVEANAIEGVDDVDATEADKTHYNDDSDEDLLPGN
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgtgtgctggcctggtgcagttttattggtttcagcggcgctgtgtttggac
ctggagcacgcactgagtctcaaccggagagaaaatacggcgtttttaagcgaatggaaa
agcggtttcggtttgaaagatgtagctgagaggaaagtgagaaggagcgaggagtcggtg
ggagagtcgtgtcactccctgcaggactatgaagccaggctgcaggaggacacacacact
cgtgtctttaatgacgtgtccggctcggtgtctctggcctgggtgggagacggaacaggg
gtgctgctggtcctcactacgtatcaggtgccgttgttcatgttccgcttcagcgagccc
aaactctacaggagtgaagaccatgggaaatccttccaggatgtcacgtatctcctgaac
agcaccctcatcatgacgcacttcggcatcgccattggcccggacaactccggaagggtg
atcctcacaggttatgtgtctgagggaaaaggctcgagaattttacgttcgctggatttc
gggaggagtttcaccccctccgacttgcccttccaagtgctgatgcagatcacctacaac
ccgaaaaacaacagcgttctcgccgttattagcacagtgtatgacctgtggctctctgag
gactttgggctccactggaagaggattcatgacacagtgtgtctggtgaaatggnntaac
acacacacatacacacacacacacaacgagctgttaattagatctaatagcttatgcagt
gaaaggggtatgctggagttgaggaagaccacagatttcggccgaagctttaagactata
gggaggaggatttactcgtttggcctgggcggccgatttctcttcgcttccgtcatgtct
gccacgagctcgatgcgcatgattcatgtgtctgtggatcagggggaggtttgggacatg
gcccagctgcccaacgtgggacatgaacagttttactccatactgtctgccaatgacgac
atggtgttcatacacgtggatgaacctggagactcagggatgggtatgatctacgtgtct
gataaccgaggcatcgtcttctccaagtccctcgagcgccatctttacacgtccacaggt
ggtgaaactgacttcactgtcgtcagctcactcaggggcgtctacatgaccagcgtgctg
gctcacgatggttctgttcagacagtggtaacgttcaatcagggaggaaattggaggtct
ctgaagaaaccctggaatgcagagtgtgactccactgcaaaggatccagacatgtgcagt
ctgcatattcacgccgcctacagcacgtcgatgaggctcaacgtgccgatgctgcctctg
accgaacccagcgctgttggtctcatcctagctcatggcagcgtgggggacgccgtgtcc
atcttgtctcctgacgtttatgtgtctgatgacggcggatacacgtgggcacgagcgctc
aaaggaccacaccattacgtcatgctggactcagggggtctgctggtggccgtggaacac
aaccccatccagcccatcgcacagatcaagttctccacggacgagggccagtgttggcac
gtatataacttcacagacacgccgctgtacttcacgggtttggcctcggagcccggagct
cggtccatgagcctcagcctgtggggtttcagacagccggtgttcagccaacacttagtg
tccatcactatagacttccaccagctgctctccaaagactgtggggaggaggattacgtg
cagtggctcgcccactccgataacaccggcaacccgaacgacgggtgtctgctgggatat
aaagaaaaatatttacggctacgcaaagactcgacgtgccgaaacgggagggatttcgtc
atcaccaagcagcccacaccttgtccctgcactctggacgacttccagtgtgattttggc
tactaccgtgccatgaacagctcagagtgtgtggaacaaccggagctgaagggccactca
ctcgagttctgcctgcacggccgtaaagagcagctccaaaccagcggctacaggaagatc
ccaggagaccggtgtgagggaggcacacagccggagaggaaactgatcgacctgagcaag
aagtgtgtcagtaacctgcttagtccagagcttctgtcagagtctcagtcaggaagcgtg
gctcctgtagtgtccgtcatcttcctcgttctgctcgtctgtgccgtggccggggtcctg
cttgtcaagaagtacgtgtgtggaggaaggttcctggtgcaccgttattcagagatgcag
aggcatgtggaggctaatgccattgaaggtgtggacgacgtggacgctacagaggcagac
aaaacgcattacaatgacgactcagatgaggaccttctgcctggaaattga
DBGET
integrated database retrieval system
