KEGG   Pangasianodon hypophthalmus (striped catfish): 113539724
Entry
113539724         CDS       T05759                                 
Name
(RefSeq) lysine-specific demethylase 5B-B-like
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:phyp01009]
    113539724
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:phyp03036]
    113539724
Enzymes [BR:phyp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     113539724
Protein phosphatases and associated proteins [BR:phyp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     113539724
Chromosome and associated proteins [BR:phyp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    113539724
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID PHD zf-C5HC2 JmjN PHDvar_NSD PHD_4 GlgE_dom_N_S zf-PHD-like
Other DBs
NCBI-GeneID: 113539724
NCBI-ProteinID: XP_026791512
LinkDB
Position
Unknown
AA seq 1476 aa
MTQPRPNEFIPPPECPVFEPSWEEFEDPFAFINKIRPIAEKTGICKIRPPQGWQPPFACD
VDRLHFTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKSLDLYQLYKLV
MEEGSFDMVCRERKWTQIALKMGFAPGKAVGSHLRAHYERILYPYYLFQTGANILNSQKP
TLTNDTKDKVYKSHDLPQRQSVQPAETSTIARRAKRSKISLKGRCFKSEQEEQCENRPNL
RRRMGSYVAKPEAVKNFPVQVKQEPMEQVESMPNGEKSKVEQYMCLVCGGGGDEDKLLLC
DGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECGKPQVAFGFEQAPRDYTLRSFGDMAD
SFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKDFGSGFPVRNGPFKV
MPNEEHYLSCGWNLNNMPVLDASVLTHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYS
INYLHWGEPKTWYGAPGFAAEQLEAVMKKLAPELFESQPDLLHQLVTIMNPNVLMEHGVP
IYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWMPLGRQCVEHYRSLNRYCVF
SHDEMVCNIAAKADSLELELASAIQRDMSIMIQEEKELREKAYKLGVWHSQQVDYDEQPD
EERQCSKCRTTCYLSAITCPCSPGQLVCLHHLQDLCSCTPNRYTLNYKYTLGMLNQMFKT
LAAHAESYSDWASKVNIILKADQDNKSDLEELRALIVEAEKMMYPEMDMLHRLRQAVQDA
EKSALMAQQLLNGKRQTRYRSGGGKSQKHLTVEELRLFVKQLYNLPCTIRQAPFLKALLS
RVRQFQEQSSDLLAIEMPSSSALQAVLDEGSGLEVELPELDVLRQRLEQARWVEAVQQAS
KEPTSLSLERMRKLIDQGVGLEPHACVERTMAHLQELLTVCEHCEEKAHSMLMARPRQNL
ETLEAVLMEVNSIQAYLPNCLQLQDSVIRAREWIQEAEALQLGGRIPVLSSLNDLVLKAK
GIPVLLEPLARLESLVSEVQAWKESAAKMFLLRYSSLSLLEVLCPRCDTGCQKSKSKRVR
DVPPAATKTGIKLNCFGDVERALSESKDTALAMATLCEVRLKELENLNILRTTNNAKFLP
TNGLAPTVCLCHTVPAGPMLQCELCHDAYHSGCVPGYQGTQAGQPWLCPLCSRSEKPPLD
KVLPLLASLQRIRVRLPEGDALRFMIERTVRWQQRVQQVPPFTQQFIGKMRPFSGKPSSL
SLGGSNGCFYMHHSCIPLSVLSPELEELLVEGLLLQVTLPELQHLYQGLLSRFFPSQHAL
QSSEHDHQYHIAQDISLVYKSPPQGKVQDLVLELPKDTEKLEKNPKRHLEKETSDVQDRD
TVKKPKKKRSRTNQERTHEKKNISSSGLNSDPPFSEDSEEDWSVCSAKRCQQPEGNEVNW
VQCDGNCNQWFHQICVGVSAEQAENEDYICINCLVK
NT seq 4431 nt   +upstreamnt  +downstreamnt
atgacccaacctcgacccaacgagtttattccaccgccggaatgtcctgtgtttgagcct
agctgggaagaattcgaggacccgtttgcgtttatcaacaaaatacgtcccattgcagaa
aagactggtatttgtaagatcagaccgccgcaggggtggcaaccaccatttgcctgtgat
gtggaccgattgcatttcaccccacgtatacagaggctcaatgaattggaggctcaaacc
agagtcaaactcaactttctggaccagatagccaagttttgggagctgcagggctgcacg
ttgaaaatccctcatgtggagcgcaaatctcttgacctgtatcagctctacaagttggtg
atggaggagggcagctttgacatggtctgcagggaacggaaatggacccagatagctctg
aagatgggctttgctcctggcaaggctgttggatctcacttacgtgcccactatgagagg
attctctatccttactacctattccagacaggggccaacattctgaactcacagaagccc
actctcacaaatgataccaaagataaggtatataaatctcatgacttgccccagcgacag
tctgtacagcctgcagaaacctccaccattgctcgcagagccaaacggtctaaaatctct
ttaaagggtcgctgtttcaaaagtgagcaggaggagcagtgtgagaacagacccaacctg
agaaggagaatgggctcttatgtggcaaaaccagaagcagtgaaaaattttccagtccag
gtgaaacaggagcctatggaacaagttgaatcaatgcctaatggagaaaaatcaaaggtg
gagcagtacatgtgtttggtgtgtgggggaggcggtgatgaggacaagctgttgctgtgt
gatgggtgcgatgacagctaccacacattctgtcttatcccaccactccatgatgttccc
aaaggggactggagatgtcccaagtgcctggcacaggagtgtggcaagcctcaggttgcg
ttcggctttgagcaggcacccagagactacacactccgctcctttggagatatggcagac
tccttcaagtcagactatttcaacatgcctgtgcatatggtccctactgagctggttgag
aaagaattttggcgtttagttagcaccattgaggaagatgtcacagtagagtatggggca
gacattgcctcaaaggactttggcagtggcttccctgtcaggaatggtccttttaaagtc
atgcccaatgaagagcattacctcagctgtggctggaacctaaacaacatgccagtgctg
gatgcgtctgtgctgactcacatcacggctgacatatgtgggatgaagctgccctggctc
tatgtgggcatgtgcttctcctctttctgttggcatattgaggatcattggagctattct
ataaactatttgcactggggagagccaaagacatggtatggtgctcctggctttgcagca
gagcagttggaagcagtgatgaagaaacttgcccctgagctctttgagtctcagccagat
ttgctccatcagttagtcacaatcatgaaccccaatgtgctaatggagcatggagtccct
atttaccgcacaaaccagtgtgctggtgagtttgttatcaccttccccagagcgtatcac
agcgggttcaatcagggctttaactttgcagaggctgttaacttctgcacagtagactgg
atgccacttggtcgacagtgtgtagagcattatcgctcattaaacagatactgtgttttc
tcccatgatgagatggtctgtaatattgcagccaaggcagacagcctggagctggagttg
gcctctgccatacagagggacatgagcattatgattcaggaggagaaagagctgcgagaa
aaagcctacaagctgggtgtgtggcactcccagcaggtggactatgatgagcagccagat
gaggagaggcagtgttctaaatgcaggactacctgctacctatctgccatcacctgtccc
tgcagccctggccagctggtgtgtctacaccacctccaggacttgtgctcctgtacccct
aaccgttatacgctgaattataagtacaccttgggcatgttgaaccaaatgttcaagact
ttggcagcacatgctgagtcatacagtgactgggcttctaaagttaacataattttaaag
gcagaccaagacaataaaagtgacttggaggaacttcgtgcactgattgtggaggcagag
aagatgatgtatcctgagatggacatgctacaccgtttaagacaggctgtccaggatgca
gaaaagagtgccttaatggcccagcagctactcaatggaaagagacagaccaggtatcgc
tcaggtggtgggaaatctcagaaacatctcactgtagaggagttgaggttatttgtaaag
cagctatataacctgccctgcaccattagacaggccccttttctcaaggctctgctcagc
cgtgtcaggcagttccaggaacagagctcagatctcctggccatagagatgcccagctcc
tcggccctgcaagctgtgttagatgagggctcggggctggaggtagagttgccagagctt
gatgtgctcaggcagcggctggagcaggcacgctgggttgaggcagtacagcaggccagc
aaagagcctaccagcctcagcctggaacgcatgaggaaactgattgaccagggagtgggt
ctggagccccacgcctgtgtggagaggaccatggcccacctgcaagagctgctcactgtg
tgtgagcactgcgaggagaaggcacacagcatgctaatggccagacctcgccaaaattta
gagactctggaggcagtgctgatggaagtaaatagtatccaggcttacttgcccaactgt
ctccaattgcaagactcagtcatcagggctagagagtggatacaggaggcagaagctcta
cagcttggaggacgtatccctgttctttcctcattgaatgatctggtcttaaaagctaaa
ggcatcccagtcctgctggagcctctggcacggctggaaagcctagtgtcagaggtgcag
gcctggaaggagagcgcagcaaaaatgtttttgttgaggtactcctccctctccctcctg
gaggtactgtgccccaggtgtgacacagggtgtcagaaatcaaaatcaaaaagagtgaga
gatgttcctccagctgctacaaaaactggcataaaactgaactgttttggtgatgtggaa
agagctctctctgaaagcaaagacacagctttagcaatggctactttgtgtgaggtgcgt
ttgaaggagctggagaacctgaatatcctaaggaccacaaacaatgcaaagtttctgccc
acaaacggcttggctcctacagtgtgcctgtgccatacagtgccagcaggccccatgctc
cagtgtgaactctgccatgatgcttaccacagtggttgtgtgccagggtaccagggtaca
caggcagggcagccttggctgtgcccactctgcagccgatctgagaagcctcctctggac
aaggtgttgcccctgcttgcctctctccagcgtattcgggtacggctcccagagggtgac
gcgctgcgttttatgattgagaggacagtgcgttggcagcagagggtgcaacaggtccca
ccttttacacagcagtttattggaaaaatgagacctttctctggaaagccttcttctcta
tccctgggtgggagtaacgggtgcttctacatgcaccattcgtgcattcctctcagtgtt
cttagtcctgaactagaggagctgcttgtagaaggactccttctacaggtgactttgcct
gagctgcagcatctctaccaggggttgctcagcaggttttttccctctcagcatgcccta
cagagcagcgagcacgaccaccagtaccacattgcacaggacattagcctggtttacaaa
agcccaccccaaggcaaggtccaggatttagttttagagttgccaaaagacactgagaag
ctagagaagaaccctaagaggcacttagagaaggagacctctgatgtgcaggacagagac
actgttaagaaacccaagaaaaagaggtctaggacaaaccaggagaggacacatgagaaa
aaaaacatctcctcctctggtttgaactcagacccacccttttcagaggactccgaggag
gactggtctgtgtgctcggcaaagcgatgtcaacagccagagggaaacgaggtaaactgg
gttcagtgtgatggcaactgtaaccagtggttccaccaaatttgtgtgggtgtgtctgct
gagcaggctgagaatgaagactacatctgcatcaactgcttagtaaaatga

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