Pangasianodon hypophthalmus (striped catfish): 113539759
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Entry
113539759 CDS
T05759
Symbol
lamc2
Name
(RefSeq) laminin subunit gamma-2
KO
K06246
laminin, gamma 2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04382
Cornified envelope formation
phyp04510
Focal adhesion
phyp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113539759 (lamc2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113539759 (lamc2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
113539759 (lamc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_B
EGF_laminin
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
113539759
NCBI-ProteinID:
XP_026791595
LinkDB
All DBs
Position
Unknown
AA seq
1114 aa
AA seq
DB search
MRSAWIFLCAVCVFCPVKGTHRSSSCACNGKALYCVRDSLGLRCANCQDNTEGRHCESCK
EGYYHQRAGERCLPCYCNPVGSEGPGCDSQGQCVCKRGVQGAQCDRCANGSPVSATGCEP
LQQKPCFCNGHSNECSPAQGYSVYNIISTFDQGMEGWRVVTAPSASPSQVQSRWSPAHHS
VEVISSDILPVYLSAPAQYLGNQALSYGQTLSFTLRLNRGVRYPSASDVVLEGAGLKVSA
PLGNMRTVIPCGKKITYTFRLDEQPSSRWNPRLSAPEFQTLLSNVTAIKIRVTFGEEGRG
YLDDVTLVSARMGSGFPAPWVEKCHCPTGYEGQFCERCAAGYKRRLPGQGVRSQCEPCAC
RGGSCDPETGDCYSADETPSGQACGTGYYSDPEIPGACKKCPCPAGYICSLAAGTLNVKC
KCPPATTGSRCQKCSDGFYGDPLGESGVQRPCQRCHCNGHLDLNAVGNCDRLTGECFKCM
NSTTGFQCEKCVEGFFHSKAGDACRACNCNPKGSIASSCSDQGQCKCKEGFEGKKCVRST
CPSCFNPVKSQIGKYVKKLQQVEALFNEVGTGGVDITRAIDKAISTAEDMVKTVESDADS
LIEAEKNLHAQLLAIGSNQMKEEGKIEDISEMVESVVSQERQYQREVTDIQKLISDIRQN
LQKAKREIQSVELPLGDAPPGTNTVSDLVQKASDLAEKHVGEAATVEQTAKSSLLEAEKA
LALMRTVISGENKVTEQLNGLRTQYETDIAQVNAMNKQAARLSNAAETESTVALDTLKQI
SDLEKNLPKATKKDITSLVATLDGLKNAFGSNVSGFLQLHNQAGADQREAVELMNQLRNA
QQVQDHLLARANVAKADADKALKLFNSLGSVDEALETLKGFETQINSSKALADDALSKLP
IISSIIGKAVVNNDKTQAILDQLGDYSDAQATLNKLNISLAKVEKMSGSLPSSSDLLKAA
TTLQGGLEGLDTQVQSTRNKLTEEKTDAERERKLAEEVNWEASGAYIKAQNTRDAVGDAL
KSVNNLLGLLGTPGAVDEKKVTDLEEAIATSRRRVETELRPRLRELEDKEAQQRAAITRM
INDIDTILADIDNLEHINRAIPGGCYNTPPIERA
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcgcgtggatctttctgtgcgcagtctgcgtcttttgcccggttaaaggaact
catcgctcctcgagctgtgcgtgtaatggaaaggctctgtactgcgtgcgagactccttg
ggtctgcgctgtgccaactgccaagacaacactgaaggccggcactgtgagagctgtaag
gaaggatactaccaccagagagcaggagagcgctgcctgccctgctactgcaaccctgta
ggctctgagggcccaggatgtgacagtcaggggcagtgtgtgtgtaagcgaggtgtgcag
ggggcccagtgtgaccgctgcgctaacggatctccagtctcagctaccgggtgtgagccg
ctgcagcagaaaccctgtttctgtaacggtcattccaacgagtgctccccagctcaaggt
tactcagtttacaacatcatctcaacatttgatcaagggatggagggctggagagtcgtc
actgctccgagcgcgagtccatcccaggtgcaatcccgctggtctccagcacaccacagc
gtcgaggtcatctcttcagacatcctgcctgtttacctgtctgctccagctcagtatctg
ggaaatcaggctctgagctacggtcagacactgtccttcacactccgtctgaaccgagga
gtccgctatccctctgcctcagatgtcgtattagaaggagctggactaaaggtttctgct
ccgctgggaaatatgaggaccgtcatcccctgtggcaagaaaatcacctacacgttcagg
ctggatgaacaacccagcagcagatggaatccccggctctcagcaccagaatttcaaacc
cttctgagtaacgtcacagccatcaagatccgagtcacgtttggggaagagggtcgtggt
tatctggacgacgtcactctggtctcagctcggatgggttctggcttccctgcaccctgg
gtggagaagtgccattgtccgacaggttatgaaggacagttctgtgagcgctgcgctgca
ggctataaaagacgtttgcctggacagggtgtccgtagccagtgtgagccgtgtgcctgt
cggggaggaagctgtgatcctgaaacaggggactgctactcagctgatgagactcctagt
ggacaagcctgtggtactggttactacagcgaccctgagatccctggagcctgcaagaag
tgcccatgccccgcaggctacatctgctcgctcgctgcagggaccctgaatgtaaagtgc
aaatgcccacctgcgactacaggctctcggtgccagaagtgcagcgatggtttctatggt
gatcctctgggagagagtggcgttcagcgaccctgccagcgctgccactgtaacggccac
ttggacttaaatgccgtgggcaactgcgaccgcttgacgggggagtgtttcaaatgcatg
aacagcaccacaggcttccagtgtgagaagtgtgtggagggattcttccacagcaaagcc
ggcgatgcgtgtcgagcttgtaactgcaacccaaagggatccatcgccagctcctgcagc
gaccagggccagtgcaagtgtaaagagggttttgaggggaaaaagtgtgtcagatccacg
tgtccatcatgcttcaaccctgttaagagccagattgggaagtatgtgaagaagctgcag
caggtggaggctctttttaatgaagtggggactggtggtgtggacatcactcgcgccata
gacaaggcaatcagcactgctgaggacatggtcaagacagtggaaagtgacgcagactcg
ctgattgaggcagagaagaatcttcacgcccagctgctagccatcggcagcaatcagatg
aaagaggaggggaaaatagaggacatctcggagatggtagagagcgttgtcagccaggag
cggcagtatcagagagaagtaactgacatccagaagctcatcagtgatattaggcaaaat
ctgcaaaaggccaagcgggaaatccaatcagttgagctccccttgggtgatgccccgcca
ggtacaaacacggtgtccgatttggttcagaaagcaagcgatctcgctgagaagcacgtg
ggtgaggcagcaacagtggagcagacagcgaagagctctctgctcgaggctgagaaagct
ttggctctcatgcgcactgtcatcagcggagaaaacaaagtcacagagcagctcaatggc
ctcaggactcagtacgagacagacatagcccaggtgaatgccatgaacaagcaggcggct
cgtctgagtaacgcagcagagactgaaagcacagtggccctggatactctgaaacaaata
tctgacctggagaaaaaccttccaaaggccacaaagaaggacatcaccagcttggttgcc
acactggatggtctgaagaatgcatttgggagtaacgtgtcaggattcctgcagctgcat
aatcaggctggtgctgatcagagagaggcagtggagctaatgaatcagctcagaaatgct
cagcaggtccaggatcacctgctcgccagggccaacgttgccaaagcagacgcagataaa
gccctgaagctctttaacagtctgggcagtgtggatgaggctctggagacacttaaagga
tttgaaacccagatcaacagtagtaaggctttggctgatgatgcgcttagtaaactgccc
ataatcagcagcatcatcgggaaagccgtggtcaacaatgacaagactcaggccattctg
gaccagctgggtgactacagtgatgctcaggccacactcaacaagctgaacatctctctg
gccaaagtagagaaaatgtccggttccctgccgtcctcgtcagatcttttgaaagcagct
acgacgctgcagggaggtctggaagggctagatacccaagtacaatccaccaggaataaa
ctgactgaagagaaaacagatgcagagagagagcggaagctagccgaggaggtgaattgg
gaggccagtggagcatacattaaagcacagaacactagagatgctgttggagatgctttg
aagtccgttaataatcttctaggattactgggaacaccgggagctgtagatgagaagaag
gtgacggatctggaggaggctatagctacaagccgtagacgtgtggagacagagctcagg
cccagactcagagagctagaggacaaagaggctcagcagagagctgccatcacacgcatg
atcaacgatatcgacaccatcctggctgatatcgacaacctggagcacattaaccgagcc
attccaggtggctgctataacacaccgcccatcgagagggcttag
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