Pangasianodon hypophthalmus (striped catfish): 113539815
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Entry
113539815 CDS
T05759
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04020
Calcium signaling pathway
phyp04148
Efferocytosis
phyp04218
Cellular senescence
phyp04310
Wnt signaling pathway
phyp04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113539815 (nfatc4)
04020 Calcium signaling pathway
113539815 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113539815 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
113539815 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
113539815 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113539815 (nfatc4)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
113539815 (nfatc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
113539815
NCBI-ProteinID:
XP_026791671
LinkDB
All DBs
Position
Unknown
AA seq
761 aa
AA seq
DB search
MSSGWEEGELDFKLIFEEEQQLQDSTVSNNQLTSTLSQPMGILPSPPPSNHRAGMHSPPP
RRALVREFSGTYESLPARSVQVSESRVLECPSIQITTISPDDDFTPGGGTYWDRDRLYLP
FLDPYCYRDSSMGAGSLSPSPASSPSSRGWLSPASSCDSLLVEDEELSEATTHFCLSPSS
RPTSPGGKKRRNSPLPSPSHSRRGSYSEDHVQFLETGDSAPQSQGQIELSIPQKTRKTSL
EQVSSRDVELEQVPAPNTPCPSSELGQLRREPPTLGMDYLSVPNTLGWGRTRASAHSPIF
RSNALPPLDWPLPCQFDQYELRIDVQPRPHHRAHYETEGSRGAVKASPGGHPVVKLVGYA
ERQPLSLQVFVGTADDRSIRPHPFYQIHRVTGKMVGTASQESMQAGTKLLEIPLNPETNM
TALIDCAGILKLRNSDIELRKGETDVGRKNTRVRLVFRTHLPLAPPLGPPGRVLALQVAS
QPIECSQRSAQELPIIESISVTSCLVEGGPELLVNGSNFLPTSRVLFMERGSDGKLQWEE
EAHVDRDKSTENVLCVRVPAYSDMCVSQPVCACLYVSNGKRKRSSTHCFKYLPMLCKEED
PLLSRPSLLLLDGGMPLCPHPHPPEYSYTAPVAYQDEFCPPPETSEDRGPVNECDPSFQS
LELGFSELLPPLYPPQPWPDSPYLSSSPSPSHSSSISPFPSSPVSTSPLPPPLLPHGPPA
YHQECHMTFSGAPPMQHITLDEVTEFIGEDIRTFHTDSRPA
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgggtgggaggaaggagagctggacttcaaactgatcttcgaggaggagcaa
caacttcaggacagcacggtctccaacaaccaactgacctccacactcagccagccaatg
ggaatcctcccttcccctccgccatccaatcacagggctggcatgcattccccgcccccc
agacgagcactggtgagagagttcagtgggacgtatgagagtctcccggcccgatctgtc
caggtctcggagtctcgtgttttggagtgtcccagtattcagatcaccaccatctcccct
gatgatgattttaccccaggagggggaacttactgggacagagaccgtctctacctgccc
ttccttgacccctactgttacagggacagcagtatgggggcagggtctctgagcccgagt
ccggcctccagcccatcttctcgtggttggctaagtcctgcgtcaagctgtgattctctc
ctggtggaagacgaggagctgagcgaagccaccacccatttctgtctatcaccctcatcc
cgacccacctcacctgggggcaaaaaacggagaaactcccctcttccctcgccaagccac
tcccgcaggggcagttactccgaagaccatgtccagttcttggaaacgggagactccgcc
ccccaatctcagggccagattgagctcagtatccctcagaagaccaggaagacctcactg
gagcaggtctcctcccgagacgtggaactagagcaggttcctgctccaaataccccctgc
ccctcctcagagctggggcaactcaggagggagcctcccacgctggggatggactacctc
tctgtaccaaacaccctcggctggggaagaactcgtgccagtgcccacagccccatcttc
aggtctaatgcattgccaccgcttgattggccgttgccgtgtcagtttgatcagtatgag
ttgcggatcgacgttcagccgcgtcctcatcatcgcgctcattatgagacagaaggaagt
cgaggagccgtgaaggcgtcaccaggaggacatcctgtagtgaagctggtgggatatgca
gagcgtcagccactttcattacaggtttttgtaggaactgcagacgacagatcaattcgc
ccacatccgttttatcaaatacatagggtgacagggaagatggtcggcacagcgagtcag
gagagcatgcaggctggaaccaaactattggagatccctttaaaccccgagaccaacatg
acagcacttattgactgtgcggggatcctgaagttgaggaactctgatatcgagctgagg
aaaggagagacagacgttgggcggaagaatactcgtgtgcgattggtcttcaggactcac
ctgcctttagcaccgccccttggtccacctggacgagtgttagcgctgcaggtggcctct
caaccaattgagtgctcccagcgctcagctcaggagttacccatcattgagtccatcagc
gtcacttcttgtttggtggagggaggaccggagcttctggtcaatggcagcaacttcctg
cccacatccagagtgttgtttatggagagaggttcagatggtaaactgcagtgggaggag
gaggctcatgtggaccgtgacaaaagcactgagaatgtgttgtgtgtacgcgtgccagcc
tacagtgatatgtgtgtgagtcagccggtatgtgcgtgcctgtacgtgtccaacggaaag
cgcaagaggagcagcacacactgctttaaatatctaccgatgctgtgtaaagaggaagac
cctctgttgtctcgcccatctctcttgctgttggatggagggatgccattgtgtccacac
cctcaccctcctgagtattcttacactgcccctgtggcatatcaagatgagttctgtccc
ccgcctgagacgtcggaggacagggggccggtaaacgagtgtgatccctcattccagagc
ctggagctgggtttcagtgagctgctcccaccactgtacccaccccagccatggcccgac
tctccgtacctgtcctcatccccatccccgtctcactcctcctccatcagcccattcccc
agcagccctgtctccacctcccccctcccccctcctctcctaccccacggcccccctgcc
taccaccaggagtgtcacatgaccttcagtggtgccccacccatgcagcatatcacgctg
gatgaagtgactgagttcattggtgaggacatcaggacgtttcacacagacagccgaccc
gcgtaa
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