Pangasianodon hypophthalmus (striped catfish): 113539852
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Entry
113539852 CDS
T05759
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1-like
KO
K15516
fragile X mental retardation protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113539852
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113539852
Factors involved in mRNA localization
Other mRNA localization factors
113539852
mRNA cycle factors
Stress granule specific factors
113539852
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
KH_1
Agenet
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
113539852
NCBI-ProteinID:
XP_026791728
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MDGLPVEVRGSNGAFYKAFIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPSDYHKDIG
EGEEVEVYSRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTSERIRPVNPNSP
STRNSFYKTTIAVPVDLREICLTDNIHKDFRKAVGANCVFYNTSSHELVVLSTNDSTVKR
ASLLSDMHFRSIRTKLFLMSRNEEATKHLETSKQLASAYQEEVRVREDLMGLAIGSHGAN
IQQARKVPGVTAIELEEESCTFRIYGETPEAVKQARVYLEFKEDSFQVPRNLVGKVIGKS
GKIIQEIVDKSGVVRVRIEGDNDKKLPREEGMVPFIFVGTKENISNAQALLEYHVAYLQE
VEQLRLERVQIDEQLRQIGVGYRAAPNRTGAPGASDRERGYQTDESSNSLQTSRTYGGRG
RGRKSNNAYSGYGTNSEMSNASESEDLAERDPRPRGVGGEERGSRRGGRGRGSSTGRGRG
GPGSRSSNTISSVLKDPDSNPYSLLEGEGDLGGDTDASESMGGSDRRRRSRRRRNDQEPS
VIDAANESDGQAAASENGLEDESKPQRRNRSRRRRNRATRPEGGSASRDRQPVTVADFIS
RAESQSRQNLPVKKEEMQHASQPKENGTSVKKEEHTPSKRSPSNGVASSGEALTLVNGVS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggacgggctgccggtggaggtgcgcggctccaacggggccttctacaaggcgttcatc
aaagatgtccatgaagactccctcacgatagtttttgagaacaactggcaaccagagaga
cagctgccattcagcgatgtgaggttgccacccccatccgactaccacaaggacatcggc
gaaggagaggaagtggaggtgtactctcgagcgaacgaacaggaaccttgcggctggtgg
ctggcgagggtgaggatgatgaagggcgagttctatgtgatcgagtatgctgcgtgtgat
gccacatacaacgaaattgtcacatcagaaagaatccggcctgtcaaccccaacagccct
tcaactcgcaactccttctacaaaaccaccattgctgtgcccgtggacctcagagaaatc
tgtttaactgacaacatccacaaagacttcaggaaagcagtcggagccaactgcgtcttc
tacaacacttcatcacatgaactggttgtactgtccacgaacgactccacagtgaagcgt
gcctcccttctgagtgacatgcacttccgcagcattcgcaccaagctctttctcatgtcc
cgcaacgaggaggccaccaaacacctggagacgagtaaacagctggcatcagcttatcag
gaggaggtacgggtgcgtgaggatctgatgggtttggccatcggctcccacggtgccaac
atccagcaggctcgcaaggttcctggggttactgccattgagcttgaggaggagagctgc
accttcaggatctatggagagaccccagaagctgtgaaacaggctagagtatatctggag
tttaaagaagactccttccaggtacccaggaatcttgtaggcaaagttattgggaaaagt
ggcaaaatcatccaggaaattgtggataagtctggtgtggtgcgtgttcggatcgaaggc
gacaacgacaaaaagctgcccagagaggagggtatggttcctttcatctttgtaggaacc
aaagaaaacatcagtaatgcccaagctttgctggagtaccatgtggcctacctgcaggag
gtggaacagttacgtctggagcgggtgcagattgatgagcagcttcgtcagatcggtgtt
ggttaccgtgcagccccaaaccgcacaggtgcacctggagccagtgatcgtgagagggga
taccagactgatgagagcagcaactctctacagacctcccgcacgtacggcggacgaggc
cgcgggcgcaagtccaacaacgcatactctggttatggaacaaactccgagatgtccaat
gcatctgagtcggaggatctggctgagcgggatcctaggccccggggagtgggaggtgag
gagaggggctcccggagaggaggccgtggccgaggatccagcacaggaagaggccgtgga
ggcccaggatcccgcagctcgaacacaatcagctcagtgctaaaggaccctgacagtaac
ccctactctctgctggagggtgaaggtgatctgggcggagacactgatgccagcgagagc
atgggtggcagtgaccgccgtagacgttcccgccgtcgccgcaatgaccaggagcccagt
gtgattgacgccgccaatgagtcagatggccaggcagctgctagtgagaatgggctggaa
gatgaaagcaaaccccagaggcgcaacagaagccgccgtcgccgcaatcgtgccacccga
cccgaggggggctctgccagccgtgacagacagccagttaccgtggccgacttcatctct
cgtgcagaatctcagagccgacagaaccttccagtgaagaaagaagaaatgcaacatgcc
tcccagcctaaggagaatgggactagtgtgaagaaggaagagcataccccgtccaagcgt
tcccctagcaatggtgtggcatcatctggggaggctctgaccctggtgaacggtgtttcc
taa
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