Pangasianodon hypophthalmus (striped catfish): 113539912
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Entry
113539912 CDS
T05759
Name
(RefSeq) proline-, glutamic acid- and leucine-rich protein 1-like
KO
K16913
proline-, glutamic acid- and leucine-rich protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phyp03009
]
113539912
Ribosome biogenesis [BR:
phyp03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
113539912
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIX1
PELP1_HEAT
Motif
Other DBs
NCBI-GeneID:
113539912
NCBI-ProteinID:
XP_026791821
LinkDB
All DBs
Position
Unknown
AA seq
1226 aa
AA seq
DB search
MATAAWLHGPKNMRLTEGLVSALKEERPEYLPALLANYREHGVVGTQSCGTVGGLVGISN
SCLGSSKTRFEGLCLLSMLVKDSSSEVFQQHCLSWLRSLQQIIQSQAPLPSVQLAVSVLQ
DVLHYSSQLPELAREVGLNSILGILTSLLGLKSECHLAAMEGLMACMTYYPRACGSLKEK
LGVYFLSKMDSDNPKVQDVACECYGWLPCLGGVLERGGSGRRAEGWTSQVHCLLATANSI
LGKLYQGIETEETIQYEGPGVELPFPPLDDVDPLLILQLRHRYRAVCLALKHTLSVDPAT
SVRLSIQHVLNVVCRALAVSIKNINVTSEGCLKLLVLPSIHSDSLEVLSALIKAVGAGLV
QYCNVLSRLFSQALCAWMPLPEASLGQQRAYSAVRVALYHTLELWVRVGRASSSLLQGSS
SHSELLFAQLIGDITPGTEAVKLRAGQTAMSDLVGTAGKTGPRRTKGLGIGDPGGVSLQR
KGDVLANQDTCFAALRVLRQIILTSGTLLKEDLHKKLQELVVPLCVRLQQQAQCSNWDVG
SVSGQYGSAAPRCELYALLLALVLVPSPRWPAPLSCAVCVFSQGRRDRNITVSSFCAEAL
TICNALLHPRTPSISLPLLTLKPTPAASVLAPTQNPSLSLPTVLGAPAPGPSFAPRHPLS
LGPASILGSLENHLPLGPPVLPTPAGATGAQGELLLSSPAQAADLAGLAAPPETQRQVFV
RYDKEEPEDVEISLESDSDDSVVIMPQGMMLEMQEGAANTQSLPPPTGSAMPVPNAGLGS
EAGPVETSLSSDLPTSIGHQMLPADANNINSFPGSSQTEQLVSLVPPLNSNAVPLAASSG
ALGNSLPAGAQLQQMLMQPSPGGQTSQLGLSLHMQLQNQLVQSSRQPAANEQDQNVININ
STDDEEEEEDEEMEDEDELGEEEEEEEGLEEDEEEEEGSDYHEDGYYPGEEFDGFDDDDE
GEEMEEEEEEEDDEEETQPLEADNRRDVIDAEEGEVLIEGQEERGVDTFPMEGERPVEGG
IEEMKAVQSIYEEEGLKDKGGIEEIENIGAVERNESVVGEQQIETHVIGAEGEQSEENVS
VEASDQELQPQEQEGSRSESVVTPEDSGIPPEGQEQEVAIEVRNNEPSAEAEKEEIPNPS
TATTSEDTAPQQVVETAEKGVVEGTQVEEDEARGTKRKIEDREEGEVSEQSSEKKKLDDE
AMASMLADFVDCPPDDEDHGASHSHS
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atggctacggcggcttggctgcatggccctaagaatatgcggctaaccgagggtttagtg
tccgcgctgaaagaagagcgaccagaatatttacctgcacttttagcgaattaccgggag
catggcgtggtcgggacgcagagctgtgggacagtgggaggacttgtgggcatcagcaac
tcgtgcctcggctccagcaaaacaaggtttgagggtctgtgcctgttatccatgctggtg
aaagacagctcaagtgaggtgttccagcagcactgcctctcatggctccgctctcttcag
cagatcatccagtcgcaggcccctctgccctctgtgcagttggcagtgagtgtgctacag
gacgtgctgcactactcatctcagctgcctgagctggccagagaagtgggccttaactcc
atcctgggcattctcacctctctactgggcctcaagtcagagtgccacctggctgccatg
gaggggttgatggcgtgtatgacctattacccccgggcatgtggatcactaaaggaaaag
ctgggggtttatttcctatctaagatggactcagacaatcctaaagtgcaggacgtggct
tgtgagtgttatgggtggctgccttgcctgggaggtgtgctcgagcgtggaggaagcgga
cgccgggctgagggatggaccagtcaggtgcactgtcttctggcaacagccaatagcatt
ctgggaaagttataccagggcatagaaacagaagagaccatacagtacgagggtccagga
gtagagctgccctttcctcctctggatgatgttgatccactgttgattcttcagcttcgc
catcgctacagagcagtgtgcctggctcttaaacatacactcagtgttgatccagccacc
tcagtacgtctttccattcagcatgtccttaatgtagtgtgccgtgccctggctgtcagc
attaagaacattaacgtcacaagtgaagggtgcttgaagctgctggttttgccatcaata
catagtgactctttggaggtgctctctgctctaattaaagctgtgggtgctggcctggtg
cagtattgtaacgtgctatccaggcttttctcacaggcactctgtgcatggatgcccctt
ccagaggccagccttggtcaacaaagagcatacagtgctgtacgggtggccctgtatcac
acactagaattgtgggtgcgtgtaggcagggcctcttcctctttacttcagggaagctcc
tcccactcagagctactctttgctcagctcattggtgacattacaccaggaactgaggct
gttaaacttcgtgcaggacagacggcgatgtctgatctggttggtacagctgggaagacg
ggacctcggcgaacaaaaggactgggtataggagatccaggtggagtttcactgcagaga
aagggtgatgtattagccaatcaggacacgtgttttgcagctctacgagtccttagacag
atcattttgactagtggcacactcttgaaagaagatctacataagaaactgcaggagctg
gtagtgccactgtgtgtgagactccagcagcaggctcagtgcagcaactgggatgtgggc
agtgttagtggtcagtatggcagtgctgccccacgctgtgagctctatgccctattgctg
gctctggtgctggtcccgtccccacgctggcctgctccactctcctgtgctgtgtgcgtg
ttcagccaaggacgcagagaccgtaacatcactgtttcttcgttctgtgccgaggcattg
actatatgcaatgctctgcttcacccacgtaccccatccatctccctccctctactgact
ctgaagccgaccccagctgcttccgtccttgcccccactcagaatccctctctctccctc
cctacagtgctgggggcacctgcaccagggccttcctttgctcccagacatcctctgagc
ttaggccctgcttcaatcctgggctctttggagaaccatctacccctgggtcctcctgtc
ctccccacaccagctggtgccactggagcgcagggagaattgttactctcctcccctgcc
caggcagctgacctggcaggattggcagcacctcctgaaacccagcggcaggtgtttgtg
cgctacgacaaagaggagcccgaagatgtggaaatctccctggagagtgattcggacgac
agtgtggttatcatgccccaaggcatgatgctggagatgcaggaaggagctgctaacaca
caaagtctccctccaccaacgggcagtgccatgcctgtgccaaatgctgggctgggaagt
gaagcaggtcctgttgaaacctcactctccagcgatctccccacatccatcgggcatcag
atgctgccagctgatgccaacaacatcaactccttcccaggatctagtcaaacagagcag
ctggtctctctggtgccacctctgaactctaatgctgtgccacttgcagcttcctctggt
gcactgggtaattctttgcctgctggtgcacagcttcagcagatgctgatgcagccttca
ccaggtggacagacaagtcagcttgggctgtccttacacatgcagctccagaaccaacta
gtacaatccagccgccagcctgccgccaatgagcaggaccagaatgtcatcaacatcaac
agcacagatgatgaagaagaggaggaggatgaggagatggaggatgaagatgaactggga
gaagaggaggaagaggaagaaggcctggaagaggacgaagaggaagaggaaggcagcgat
tatcatgaagatgggtactacccgggtgaggaatttgacggctttgatgatgatgatgaa
ggggaggagatggaggaagaagaagaggaagaagacgatgaggaagagacccagcccttg
gaggccgacaaccggagggatgtaattgatgcagaggagggggaagtactgatagaaggg
caagaagaaaggggggtggacacattccccatggagggtgaaaggccggtagaaggagga
atcgaggaaatgaaagcagtgcagagcatctatgaagaggaaggactaaaggacaaaggg
ggcatagaagagattgagaacattggtgctgtagagaggaacgaaagcgtggtgggagag
cagcaaatagagactcatgtgattggtgcagagggagagcaaagcgaagaaaatgtctct
gtagaggcatccgatcaggaattgcagccacaagaacaagaaggatccaggtcagagtca
gtggtgaccccagaggattctgggatacctccagagggtcaggagcaggaggtggccata
gaggtcagaaataatgagccaagtgcagaggcagaaaaagaagagatacccaatccaagc
acagcaaccacatcagaggacactgcaccacagcaagtagtggagacagcagagaaagga
gtggttgaagggacgcaggtggaggaggatgaggcacgagggacaaaaaggaaaatagag
gacagagaagaaggagaggtgtctgaacagagcagtgagaagaaaaagctggatgatgag
gccatggcttccatgttggctgactttgtggactgccccccagacgatgaggaccacggt
gcctctcactcgcattcttaa
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