Pangasianodon hypophthalmus (striped catfish): 113539950
Help
Entry
113539950 CDS
T05759
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25834
SLIT and NTRK-like protein 3
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113539950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
Motif
Other DBs
NCBI-GeneID:
113539950
NCBI-ProteinID:
XP_026791894
LinkDB
All DBs
Position
Unknown
AA seq
857 aa
AA seq
DB search
MSSTFRGTMLWIVLLSSISVALVRTTPIPLLDESEEIDEPCFHPCYCEVKEGLFHVHCDG
KGFTNVSQVAHSWIRPFKLYLQKNTLRKLYFNNFLHLNNTVAVNLGNNALQDIQAGAFNG
LSSLKRLYLHENKLEVFRNDTFLGLESLEYLQADYNVIRRIESGAFRHLHKLRVLILNDN
LIPALPPFLFRSVSLTHLDLRGNRLKTLSYRGALEYIGRNLMEIQLEENPWNCACDIVQL
RAWLERIPYTSVVGEITCEYPFHLHGKDLREIKRHELCPTLTDAEVEANLGIPHSAGRAR
PTKPSSMFSANQNTVSSVEQKNLKPTRRPRPSKTPPTPRSIYPNHPPIAGYETRPPIPII
CPIGCTCNLHINDLGLTVNCKENGFHNVSELTPRPLNAKKLYLSGNLIQRIHRSDFWNFS
SLDLLHLGNNKIFYIQEGAFGNLPNLRSLYLNGNNIEKLTADMFHGLQSLHYLYFEYNEI
KEVQPAAFSPMPALQLLFLNNNLLHSLPVGAFEGTSLARLNLRNNYFPHLPVGGVLEHLH
AVVQIDLNQNPWDCACEIVPLKQWLDTLSSVVIVGEVLCKTPDAMQGKDLRSLSLEVICP
ELLKPSSSPDEHEMEFSPSFPPKAVIPLSVLVLSLVVLFVSSFFAAAALCTFIMKKRDKL
PFRKQEEAGLTGIQMECGIFTETPPTLPETPPSNHVYECITVPASQCAAYERGREGAGPL
GLCKEEAGPLERKLEGADCGESSSNYRTTLEKEEEWTTVVSHAPINTVTDIAGFHGNGIL
CPTVIDSQGPTPKVGLVHSLFGMSSWLGDISPKQALAMDTEARTDCANQTQSNYTNLSAR
LKTKMDYVDALERSYQF
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccactttcagaggaacgatgctgtggatcgtcctgctaagcagcatcagcgtc
gcgctcgtccggacgactcccatccctcttctggatgaatcagaggaaattgacgaacct
tgtttccatccctgctactgcgaggtgaaagagggactgttccacgtccactgtgatggc
aaaggtttcaccaacgtcagccaggtggctcactcctggatcagaccttttaagctctac
ctgcagaagaacaccctgcgcaagctttactttaacaacttcctgcacctaaacaacact
gtagccgtgaacctgggcaacaacgcactgcaagacatccaagccggtgcgtttaatgga
ttgagctccctgaaaaggctttacctccatgagaacaagctggaagtgttccgcaatgat
acgttcctcggcctggagagcctggaatacctgcaagccgactacaacgtcatcaggcgg
attgagagcggcgcgtttagacacctccacaaactccgggtgctgatcctcaatgacaac
ctgatacctgcgttaccaccattcctcttcagatctgtctcgcttacacacctggacctc
cgaggaaatcgtctaaagactctgagctaccgaggagcactggagtacatcgggagaaac
ctgatggagatccagctggaggagaacccatggaactgcgcgtgtgatattgtccagctg
cgggcctggctggagagaataccgtacacatctgtggtgggagagatcacgtgtgagtat
ccattccacctgcacggcaaagatctcagagagatcaaacggcatgagctctgcccaacg
ctgacggatgccgaagttgaggccaatctaggcatccctcattcagcaggaagagcgaga
ccaacaaagccttcgtctatgttctccgcaaaccagaacacagtgtcatctgtggaacag
aagaacctgaaaccaacacgaaggccaaggccgtcaaaaactccgcccacaccacgcagc
atttatccaaaccatcctccaatcgctggatatgagacgaggcctcccatccctatcatc
tgccccattgggtgcacctgcaacttgcacatcaacgacctcggcctgactgtgaactgc
aaggagaatggatttcacaatgtttctgagctaacgccacgaccgctaaatgcaaagaag
ctctacctgagtgggaatctgatccagaggatacacaggtctgacttttggaatttttcc
agtctggatttgttacacttgggaaacaacaaaatattttacattcaggaaggtgcattt
ggcaacttacccaatttacgcagcctgtatctaaatgggaataatatcgagaagctaacg
gcggacatgttccacggcctgcagagtctgcactacttgtattttgaatataatgagata
aaggaagttcagccagcggcatttagcccgatgcctgcacttcagcttttgtttctgaat
aacaatcttctacattcgcttcctgtaggcgcattcgagggaacttcacttgctcggctc
aacctgcgcaacaactacttccctcacctgccagtgggcggggttttagagcacctgcac
gctgtggtgcagatcgacttgaatcagaacccttgggactgtgcgtgcgagattgttcca
ttaaaacagtggttggatacgttaagctctgtggttattgttggtgaagtgctgtgtaag
acaccagatgccatgcagggaaaggatttgcgctctctgagcctggaggtgatttgcccc
gagcttttaaaaccatcctcatctccggatgaacatgagatggagttttcgccctcattc
cctcctaaagctgtcattccactttctgtgctcgtcctcagcctcgtcgttctgttcgtc
tcatcgttctttgctgctgcggcactctgtacgtttattatgaaaaagcgggacaagctt
ccgtttaggaagcaggaagaggcggggctaactggaattcagatggagtgtggaatattt
acagaaactccacccacactgcctgaaactccaccctctaaccatgtctatgagtgcatc
actgtgccagcttcgcaatgtgcagcttacgagcgtgggcgagagggggcagggcctcta
gggctttgcaaggaggaggcagggcctctagagcgtaagttggaaggggcggattgtgga
gagagcagctccaattacagaacgacacttgaaaaagaggaggagtggacaactgtagtc
agccatgctcccatcaacaccgtgacggatattgctggtttccatgggaacggaatactc
tgtccgacggtgattgacagccaagggccgactcccaaagtgggattggtacacagcctt
ttcgggatgagttcctggttgggtgacatcagtccaaagcaagcgctcgccatggacaca
gaggcgaggacagactgtgctaatcaaacccagagcaattacaccaacctcagcgcaaga
ctgaaaaccaaaatggattatgttgatgcgctggagagatcatatcaattttaa
DBGET
integrated database retrieval system
