Pangasianodon hypophthalmus (striped catfish): 113539954
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Entry
113539954 CDS
T05759
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B-like isoform X1
KO
K14849
ribosomal RNA-processing protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phyp01009
]
113539954
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phyp03009
]
113539954
Protein phosphatases and associated proteins [BR:
phyp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113539954
Ribosome biogenesis [BR:
phyp03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
113539954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
113539954
NCBI-ProteinID:
XP_026791902
LinkDB
All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MAPAPQEPEIALAQRLASNDKPVRTKALKTLRKYINLRSQKIEGGFTSEDLLKIWKGLFY
CLWMQDKPLLQEEISHRISGLIHSFHTADNQLLYFATFLQTVKREWNGIDRLRMDKFFQL
VRFMFRQAFEVLRRREWESSVVNQFLQVFTEQLLQNTDCVPKGLMLHILDLYMAELAQVG
SAELTAEQNLTFIDPFCKTMAKTKDLLLLTSISKNIFKTIVDHAPFAIEDLMRELQQGGG
DDSDSGQASGEEEEEIREEEELKNKAPKKTKVKKVNGIPEVVENSKGSKDDLDLDSMASE
ENDCADPVLQFDYGAIADRLFELGGHSNTRNINRTKMYSLVTIFRDLSEGIFPQKEDDNS
DVSDTSDDEIFNRKKSKKKKKRKNEKPTAGDETVVKKSKACQDEQKPSDSGQDGSLNTEN
LKKMEKKDEENIELTDTEKATDTSHVPLDAGGTPGEQDMEKERVVLKDHSQQHHEFDSHL
KTSKIEADGETVFRHNESGSQSQLEASITVKKKRKSKKLKTNSQVVGEVAAHEFQLVLEE
SDEHQTDSCNMGLKQKAFKTMSGIGSTQTSTDVKALGQSCADHKPEMASFVESPVEAGQA
ESGISLMQEKTKKKNKKKKMNVGEEKKDTETNGQIVEKPPEEVPLHSQLETDVDKIKSQG
GDAGQLEASTMVRKKKRQSKKLCSSLQEVGEEVAVQSLPKEHSASEDNRKLSTPQKVDKD
NTTTQRQLGTSTTEKKKVKRKKLKSSLQEVEVAVKTPSILEDSNKHSNDDISRDPCPTSE
EDILTQCRLKAGTSKKKKGKSKKLMSSSQEVGKEVDSTSQDRCAEVVTTDIATPAVEVTS
AKAQPSEDLMVRTKKSKKKAKEETGSKLQVALDVEEPEMSSDSAHINTNENNGDTAECSQ
PKSVKKGKKKKLLSSNEEESTLEAKKQPALEAVSTKQTHTPQKKKKIQKKQESQPAEEAN
KEPILKKTIKEKAGKDVQDTVPSDDICTPEIKSLTTIKKGKKKRKLQTDEAEMSQSIGHA
EEETDGKKVKISGTEVFTTVTPKKLKMEKASSKSDFVSFQGLIKPPTPLFCKTKPNSSTP
LASIKQKFQTPKSETKKVTFGLKNNKTTEFRKTDRSLLVNPVGSSRVAFDPKKMPVSGVL
KSPSLSPVLSVTKPAAKKRATAADFF
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggcaccagcaccacaggagccagagattgccctcgctcaaagactagcatcaaacgac
aaacctgttaggactaaagccttaaagacgctcaggaagtacattaatctccgatctcaa
aaaatcgaagggggttttacgagtgaagacttgctgaagatatggaaggggcttttctac
tgcctgtggatgcaggacaagcctcttttgcaggaggaaatttcacacagaatctctggc
ctgattcatagtttccacaccgctgacaaccagctgctgtattttgcaacatttctccag
actgtaaagagagaatggaacggcatcgacagacttcgcatggacaaatttttccagctg
gttcgcttcatgttcagacaagcttttgaggttctcaggaggagggagtgggagtccagt
gtggtaaatcagtttttacaggtcttcacagaacagcttttgcagaacactgactgtgta
ccgaaaggactgatgctgcacattctggacctctacatggccgagttggctcaggtcggc
tctgctgagctgacagcagaacagaacctgactttcatcgaccccttttgcaaaaccatg
gccaagaccaaagatctcttgctgttaacctccatctctaagaacatcttcaagactata
gtggatcacgcaccttttgcaattgaagacctgatgagggagctgcagcagggaggagga
gatgattcagattccggtcaggcttctggggaggaggaggaagaaataagagaggaagag
gagttgaagaacaaagcacccaagaagactaaagtgaagaaggtcaacggcatccctgag
gtagtggaaaacagcaagggcagtaaagatgacctggatttggacagcatggcttctgaa
gagaatgactgtgctgatcctgttctacagtttgactacggtgcaatagctgatcgtctt
tttgagttaggcggccactcgaatacgcggaacatcaaccgcacaaagatgtacagcttg
gtgacgatttttcgtgatttaagtgaaggtattttccctcaaaaagaggatgataacagc
gacgtgagtgacacatcagatgatgagatatttaatagaaagaagagcaaaaagaagaag
aagaggaaaaatgagaagcccacagctggagatgaaactgtggttaagaagagcaaagct
tgtcaagatgaacagaagccaagtgattcagggcaggatggctcattgaatacagaaaac
cttaagaaaatggaaaaaaaggatgaagagaatatagaacttactgatacagaaaaagcc
acggacacatcacatgttccactggatgcaggtggaactccaggagagcaagatatggaa
aaggaaagagtggttctgaaagatcattcccagcaacatcatgagtttgacagccacctg
aagacctcaaaaatagaagctgatggtgaaacagtgtttcggcataatgaatctggctca
caaagccaattggaggccagtatcactgtcaagaagaagaggaaaagtaaaaagctgaag
acaaattcacaggttgtgggagaagtagcagcacatgaatttcagcttgttttagaggaa
tctgatgaacaccagactgacagttgcaacatggggttgaagcagaaagctttcaaaaca
atgtcaggcattgggagcactcaaactagcacagatgtaaaagcattaggccagagctgt
gcagatcataagcctgaaatggcatcatttgtagaaagtcctgtggaagctggacaggct
gaaagtggtatttctcttatgcaggagaaaactaagaagaaaaacaagaaaaagaagatg
aatgtgggagaggagaaaaaggacacagaaaccaatggacaaattgtggaaaaaccacca
gaggaggttcctcttcacagccaactggagactgatgttgacaaaataaaatcccagggg
ggtgatgctggtcagttagaggccagtactatggtgagaaagaagaagaggcaaagcaag
aaactgtgctcaagcttacaggaagttggggaagaagtagcagtccaatctctgcctaaa
gaacacagtgccagtgaagacaacagaaagctgtctacacctcagaaagtagacaaggac
aacaccacaacacaaagacagctggggacaagtaccacagaaaaaaagaaggtgaaaaga
aagaaactgaagtccagcttacaggaagttgaagtagcagttaaaactccatctatattg
gaggacagtaataaacacagcaatgatgatatcagcagagatccttgtcctacatctgag
gaagatatcttaacacagtgcagactgaaggcaggcacctccaagaaaaaaaaggggaag
agcaagaagctcatgtccagctcacaggaagtagggaaagaagtagactccacatcacaa
gaccgctgtgcagaggttgtgacaacagatatagcaacacctgctgttgaagtgacaagt
gccaaagctcagccatcagaagatctcatggtgaggacaaagaaaagcaagaagaaggca
aaagaggaaactgggagcaaacttcaggtagctctagatgtcgaagaacctgagatgtcc
tcagacagtgcacacattaatactaatgagaataatggtgatactgctgaatgttctcaa
cccaaatcagtgaagaaaggcaagaaaaagaaattgctttcttcaaatgaggaagagtct
acacttgaagctaaaaaacagcctgcgctagaagctgtttctacaaaacagacacacaca
ccacagaaaaagaagaaaatccagaagaaacaagaaagtcagcctgcagaagaagcaaac
aaagaacccattctgaagaagaccataaaggagaaagcaggaaaagatgtacaagatact
gtgccatcggatgacatctgcacacctgaaattaagtccctcaccacaattaaaaagggg
aaaaagaagaggaagctacagacagatgaggcagaaatgtctcagagtattggacatgca
gaggaggagacggatggaaagaaagtgaaaatcagtggcaccgaggttttcacaacagta
acccctaagaagctgaagatggaaaaagcctcatcaaaatctgactttgtctcctttcag
ggtctaataaagccccccactccactcttctgtaaaaccaaaccaaacagcagcacacct
ctggccagcatcaagcagaaattccaaactccaaagtcagaaactaagaaagtgaccttt
gggctcaagaacaataaaaccactgaattcaggaagacagacaggagcttgttggtgaat
cctgtcgggtcgtcccgtgtggcctttgatcctaaaaagatgccagtgtcaggggtgctg
aagtcaccttcactgtctccagtcctgagtgtgacaaaacctgcagccaagaaaagagca
acggcagcagatttcttctaa
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