Pangasianodon hypophthalmus (striped catfish): 113539973
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Entry
113539973 CDS
T05759
Symbol
dennd4c
Name
(RefSeq) DENN domain-containing protein 4C
KO
K20163
DENN domain-containing protein 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113539973 (dennd4c)
Membrane trafficking [BR:
phyp04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
113539973 (dennd4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
DUF2464
PPR_2
PPR
Zf_2nd_IFT121
Motif
Other DBs
NCBI-GeneID:
113539973
NCBI-ProteinID:
XP_026791920
LinkDB
All DBs
Position
Unknown
AA seq
1894 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSVPLEHDLSETKSSGPKAPIIEVAVINKSAGETVPEGFT
CIETTYSGQPANLNHGSLKSPELFLCYKRGHEKPPLSDVGVMYEGKDRLIHGCEVIQATP
YGRCANVNNSSATSQRIFITLRRAPPIQPRNSLAVTDICVIVTSKGETPPHTFLKVDKNL
NCGMWGSNVYLCYKKSVSSSNSIAYKAGLIFRYPEEDYESFPLSESVPLFCLPMGAKIEC
WAPNTRYPLPVFSTFVLTNSSGEKVYGAAIQFYELYPADKLTEKQKIQLGLLTTVDKKPI
PDRTVNTNKCICLLSRWPFYQAFKDFLFFLYKLSVNSVNPLPIEKHISHFMHNVPFPSPQ
RPRILVQLSAHDSLMLSQPVCTPLPLSGADYSTLLTNLGPENCATLLHFVLLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKRNSSWKNLPKKPCKSLINSLVNLHHQLTIVRRTVPEGSVVEM
TPMEADFTWHKKTIALEMEIQEAFLRFMASILKGYRSYLKPITEAPSEKATAADSLYDLQ
GFLKSRERAYQKFYSQLTKTQLFIRFIEECTFVSDKDTGLAFFDYCIEKLFPSDKGTDKG
TKVEGELSEDTRLVELDESQKSEHTVFILPPEPPADDGPDPPPKYSYKSFPRLRLELFDR
PLVPKPALSTRAAGASVSSSPALLAKRTKQEVKLAYKMAKRFYSNPQLWAKCLFSHCYSL
WFICLPAGMRLAQSKPRAMQQALDVLLKMRSSEVQVLDEVCYRVVMQLCGLWGMPVMAVL
VLMEMKKAGVEANAITYGYYNKDCSWSAVVSLDAIADGDGDRLSHCSADSSSEPNGEEHT
LFSHGLIVADKNGSQCSTGGQSDQGYGSKDELHQDSVDACKTTAFPLSDGDQANKSKTVK
SQQNVEDIAGSVDSAVAVSEPPSPAESTPPPASIVRQSSGSFEKTIGRKDSGGKLFTAHS
KTEDIVLPEDEGTTNLDSTQSSQQQRAKGFAERSCSFSAESRAGMLRKKSSLELSVDHMG
ADAKILAAAFSGGKTPPPASTSVSVFSDLGMVPVASSSLEEEVNEKMELISFEVKMDEDK
GKIEKPVEEVMPKGSTEGVGRIVSSSSSSSKAVEREDVEIGADPLSLLASESEEAASIQS
QESARLVPPVVSRKLADEIEMYMNLKSPLGAKASSMELHQEAQSKGDPVDCPASKQSLGR
RSSLPAGPVKTPDLLETPKRSPAVTRSKTFAIKSLKTPSNEGQRSSSLTALVRSSQSGSL
GSVINSISGIKMDALLSGPKVDMLKSGMKQAANVASKVWGAVASAYSYSDDEEEQSQPRD
SFPARLEEQLMCGDGTDSAMPRGLMPSLASNGLTHSTTSLGSSSESSDTGRAQHTASMTL
GRSMKGVDSERSEQGSSHHASTSSIYQNCALEVLMSSCSQCRSCEVLVYDEEIMAGWTAE
DSNLNTTCPFCHSSFLPLLHVEFHDLRPPSGFYVTSTSGDSIHSGSTQPTASSSEVKVGS
PSDAADLINFSESPESKEETEGTLTYGTGTQKALVPEPVISDPLGLLERQAEKRSTSLTR
SNSVGGPLQSLDSIQRPNHGVSTTSLPNSLQEVVDTLGQKRPNPNPVSVPYLSPLVLRKE
LESLLENEGDEVIYTQKFLTQHPIIFWNLVWYFRRLDLPSILPGLILTSEHCNNGVQLPQ
TSLPQDSKQVYVQLLWDNVNLHQEPTEPLYQLWRTFLRKKGSLAPTDHQEIRTLLNSIVR
NIQTNDVYGPINLLLREIKRHPEVKRQRSIYRQILFLSLVALGRENIDVEAYDREYQLAF
EKLSPEQLKVLSPIDRPPSNSVQWCLKFFGAPFI
NT seq
5685 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagacaagggtcatcgtgtgacggactacttcgtggtggccggactgacggac
aagtctgtaccactggagcatgatctgtctgagaccaaatcaagtggtcctaaagccccc
atcattgaggtggcagtgatcaacaagtcagcaggtgaaacggtgcctgagggttttaca
tgcatagagactacatacagcggccaaccggccaacctcaaccacggcagcctgaaaagc
cccgaactcttcctgtgttacaagagaggccatgaaaaacctcccctgagcgacgttggg
gtgatgtatgaagggaaggacaggctgatccacggctgcgaggtgatccaggccacaccg
tacggccgttgcgctaacgtcaacaacagctcagctacatcacagcgcatcttcatcacg
ttacgtcgcgcgccgcccatccagccccgcaactctctggccgtcactgacatctgcgtg
atagtcacgagcaaaggcgagactcctccacacaccttcctcaaggtggacaagaacctc
aactgtggcatgtgggggtccaatgtgtacctgtgctataaaaagtcagtctcctcttct
aactctatcgcttataaagcaggtctgatctttcgctacccagaggaagattatgaatct
ttccccctttctgagtccgtgcctctgttctgccttcctatgggggccaagattgagtgc
tgggctcccaacacacgctaccccttacctgtcttctctacattcgtcctgaccaactcc
tctggggaaaaggtctatggtgcagccatccagttctacgagctctacccagcagataaa
ctgactgagaagcagaagatccagcttggactccttacaactgtggacaagaagcccatt
cccgatcgcacagtcaacaccaacaagtgcatctgtctgctgtctcgttggcccttctac
caagctttcaaggacttcctcttcttcctctacaagctctcggtcaatagcgtcaaccct
ctacctatagagaaacacatctcccatttcatgcacaatgtgccgtttccctccccacag
agacccaggatactggtccagctctcagcacatgacagcttaatgctgtcccagcccgta
tgtacaccattaccactaagtggtgcagactatagcactctgctaactaacctgggccca
gaaaactgtgccacgctgctgcatttcgtcctgctggagagcaagatactactgcactcc
ctcagaccggctgtattgactggtgtagctgaggctgtggtggcgatgatctttcctttc
cagtggcagtgtccctacatccctctgtgtcctctctctctggctggggttctgaatgcg
ccctgtcctttcattgtcggtgtggattccagatactttgacctctatgatcccccacca
gatgtggtttgtgtggacctggataccaacactatctacctgtctgatgagaagaggaac
tctagctggaagaatctcccaaagaagccttgcaagagcctgattaactcgctggtcaac
ctgcaccaccagcttacaattgtgaggcggactgtcccagaaggctcggtggtagagatg
accccaatggaggctgacttcacatggcataaaaagacgatcgctctcgagatggagatt
caagaggccttcctgcgcttcatggcctcaatattaaagggctatcgatcctacctcaaa
cccatcaccgaggcaccctctgagaaggccactgctgctgactctctctacgatctgcag
gggtttttgaagagtcgcgaacgtgcttaccagaagttctattcccagctcaccaagact
cagttatttattcgcttcattgaggaatgcacctttgtcagcgataaagacactggcctg
gccttttttgactactgcattgaaaagcttttcccatctgataaaggaacagacaaaggc
acaaaggttgaaggagagctgtcagaagacaccaggctggtagagctggatgagtctcag
aagagtgagcacactgtctttatcttgcctccagagccccctgccgatgatggcccggat
cctcctccgaaatacagctacaagagcttccctcgcttgcggctggagttatttgatcgt
ccattagtgccgaagccagcactcagcaccagagccgcaggtgccagtgtgtccagcagt
cctgcactcctggctaaaagaaccaagcaggaagtcaagctggcctacaagatggcaaag
cgcttctattcgaaccctcagttgtgggctaagtgtctgttcagccactgctatagcctg
tggtttatctgcctgcctgcaggcatgcgtttggctcagtccaaaccccgtgccatgcag
caagcgctcgatgtcctgctcaagatgaggagctctgaggtacaggtgctggatgaggtg
tgttaccgtgtggtgatgcagctgtgcgggctgtggggaatgcccgtcatggccgtactt
gtcctaatggagatgaagaaggccggcgttgaggccaatgccatcacttacggatactac
aacaaggactgttcttggtctgcagtagtgtctctggacgcaatagcagatggtgatggg
gacagactcagccactgcagtgccgacagctccagtgaacctaacggagaagaacacaca
ctgttctcacacggtctgattgtggcagacaaaaatgggagtcagtgtagtacagggggc
cagtctgaccaaggttatggctctaaggatgagctccatcaggactctgtcgatgcttgt
aaaactacagcctttcctctctctgatggtgaccaagccaacaagagcaaaacagtgaag
agtcaacagaatgttgaggacattgctggctctgtggatagtgcagtggctgtgtctgag
ccccccagtcctgctgaatcgacacccccaccagccagcatcgtcagacagtccagcggg
agctttgaaaaaaccatagggagaaaagattcaggtggaaagctcttcactgctcacagt
aagactgaggacattgtcctgccagaggatgaaggcactacaaacctagactcgacacaa
agcagccaacagcagagggccaaaggttttgcagagcgcagctgcagtttcagcgcggag
agtcgagctggcatgttgcgaaagaagagcagtctggagttgagtgtggaccacatgggt
gcagacgcaaaaatcctcgctgctgcgttttccggtggcaagactcctcctcctgcttca
acctcagtttctgtctttagtgacctagggatggtacctgttgcaagctctagccttgag
gaggaggttaatgagaagatggagttgatcagttttgaagtgaagatggatgaagacaag
ggaaaaatagaaaagccagttgaggaagtaatgcctaaggggagcactgaaggagtgggg
agaattgtgagcagctcatcatcctcctctaaggcggtggagagagaggatgtagaaata
ggggcagatcctctttccttgctggcctcagaaagcgaagaagcagcctccattcagagc
caagaatctgcacgccttgtcccacccgtggtctcacgaaaacttgctgatgagatcgag
atgtacatgaacctgaagagcccattaggagccaaggcctccagcatggaactgcaccag
gaggcccagagtaaaggtgatcctgtggactgtcctgccagtaagcagtctttgggacgg
aggtctagcctccctgcaggcccagtaaagacccctgatttactggaaacccctaaacgc
agccctgctgtcacacgctccaagacctttgcaattaagtccctgaagacccctagcaat
gagggccaaaggtcatcgtctctgactgcactagtgaggtcttcgcagagcggatcatta
ggctcggtcatcaactccatctcgggcatcaagatggacgccttgctttcaggacctaaa
gtggacatgctgaagtcaggcatgaagcaagcagcaaacgtagccagtaaagtgtggggg
gccgtggcttctgcctactcctattcagacgatgaggaggagcagagccagcctagggac
agcttccctgctcgactggaggagcagctgatgtgtggcgatggaacagacagtgctatg
cccagaggactcatgcccagcctggcctccaatggcctcacacacagcaccaccagtctg
ggcagcagcagtgagagcagtgatactggccgggcacagcacactgcatccatgactctt
ggtaggtccatgaagggagtggactcagagaggtctgagcagggctcctctcatcatgcc
agcacttccagcatctatcagaactgtgctttagaggtgctaatgtcgagctgttctcag
tgtcgctcctgtgaggtgctggtgtacgatgaggagatcatggcaggttggacagcggaa
gactccaacttgaacacaacgtgtcctttctgccacagttccttcctgcctctgctgcat
gtggagttccacgacctgcgccctccgtctggattctatgtgaccagcacctcaggagac
agtatccacagtggcagcacacagcctacagcctccagctcagaggtaaaggtgggcagc
cccagtgacgccgctgacctcatcaacttctcagaatcccctgaaagcaaggaggagact
gaagggacactgacctacgggactggcacacagaaagcactagtgccagagccagtgatt
tcggaccctctgggcctgctggagaggcaggcagagaagcgcagcacatctctgactcgc
agtaacagtgtgggcgggcctctacagagcctggactccatccagcggcccaatcacgga
gtgtccactaccagcctgcccaatagcctgcaggaagtggtggatacattgggtcagaag
cgtcccaacccaaatccagtctcagtgccttatctgagccctctggtgttgaggaaagag
ctggagtccttactagaaaatgagggagatgaggttatctacactcaaaagttcctcacc
cagcaccctatcatcttctggaacctggtgtggtatttccgccggctggacctgcccagc
attctgcctggactcatactgacctctgaacactgcaacaatggagtacagctgcctcag
acatccctgcctcaagacagtaagcaagtatatgtgcagttgctgtgggacaacgtgaac
ctccaccaggagcccactgagcctctctaccagctctggaggaccttcttgaggaagaag
ggctctttggctcccactgaccaccaggagatacggaccctcctcaacagcattgttagg
aacatccagaccaatgatgtctacggccccataaacctgctcctcagggagatcaagcga
cacccggaggtcaaacggcagaggagtatatacagacagattttgttcctttcactcgtg
gccttgggaagggagaacattgatgttgaggcttatgaccgggagtatcagctagccttt
gaaaagctgagcccagagcaactgaaagtgctctctcctattgaccggccaccctctaac
agcgtgcagtggtgcctcaagttctttggagctccattcatctga
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integrated database retrieval system
