Pangasianodon hypophthalmus (striped catfish): 113540005
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Entry
113540005 CDS
T05759
Name
(RefSeq) oxygen-regulated protein 1-like
KO
K19538
retinitis pigmentosa 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
phyp03037
]
113540005
04812 Cytoskeleton proteins [BR:
phyp04812
]
113540005
Cilium and associated proteins [BR:
phyp03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
113540005
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
113540005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
113540005
NCBI-ProteinID:
XP_026791973
LinkDB
All DBs
Position
Unknown
AA seq
2075 aa
AA seq
DB search
MNTTPHHDPQHPDVFLGSTQTPPSRPLLASKDSKRVCFYKSGDPQFSGHWVVINSRTFKT
FDALLDALSNKVPLPFGVRTITTPKGTHTIRSLDDLRHGASYVCSDQRKVKPLNLDEINR
RHVPWNSTRPTSAGRQGRRGLIRQLVKKNEVGWMAKMAESSVTVRTPKRLVVFKNRDPST
KRIVVLQRRTAPTFEALLEYLSQVMQFSVVKLYTADGRRVEGLPALILCSGVIVAAGNEP
FQLANFNLQASTQPSHSVISETTGPTKTQPLPLQQKSESSRPRSRNFSLSSERYFVNQIN
MSLNGSHSEDNEVKIGSMVSVNNQALESEEMEKCDFMSGIEEQDRLIIPSDDEIEKSFRV
NQDGSMTVEMKVHLTIKQEEMIHWTTTVSRTCVNSQDMAAFSQPVSSYNSPDNKDNNNRK
RESNIDNYESKDENTKTYKPINLNKEGDNHCGNTITEALEKPKPRFRRLPTPGPRRVRRK
ETSMENIKRLSQTEVQESTAGTYSYVEHTAEGELLEGYCVVSHSSSSSTRPVPKPRKKNL
GESKHNKTHSSLSGMAEVLQLHNKGKEITETVMHIHQSQDTYENYFAKTWADKDDRFEFM
SQEHKKPDSTESGPQSSSNGCDTDLTKPSASSGSGNARNKELLSLLSGQTDLSQTISSSA
SSFTNYETQARCESSDKGVETSTKEDSENKRVPSKKTKKAQKSGRSNKRVFLQSTVTDKK
QKGSVPDFLKDLKNSDSPESQSCTESDKYGQKVKKRKEGRSPQKVNTCHGNMLRDTSQYI
NLGHTHMLRPHMKEKLDIIPSSHSAPFKILTKQRSVNGSVTKSPKESKELSESISMPVLN
SSPCNVHQYVENWLEKIHPESVPYMDELNSHEARARFQIESEFSDISEMRSELDNSLVEN
CASVAGSTVKKPVSRRLVQIRYEGEPVEAKNPRRSWKSMPSVRIHTAEQEIGTRKNKSSE
DLVPKLPDAGGETSPNTQLNPRSGMKQVLEQLCLSIQFIRKACSHSHLSSLKKKQKSSSL
PDFSSQLASVFGSPSEALLSFLTLMTLRDGIANSANEVSGSANANNSGSNPEALQVMQSI
QKLASIEDEEELKASLASLHSSTSAQLKKSWRDFQEKNNIKESPPLSPRQSEQEFALEVN
SEEEAQDKGHIFGIREIMDELNMCEDLRREISSLVRGDLTNFNKARPTMEHFGHENETTN
TACENEDATMQDDLWGYLEEERRYLEERESQYDDITNTKPADLAKESEELHLLKSISHKP
ALLSKEPAMEESDIRKNVQIEDMSNQNGLVAYITEIVDDVKTNQERYVDNEPSKADLCEE
KQEMMDNVQMIEEKYTEVEISQVDEFQVPDNSITNLEDKVEWQENVGCMQSESELLSPTS
EIEAKDVREVIDNTVSKMGDCTEGCGINSKEEDTYSETREYPKQPDIMSVASETETEEAH
HPNNGTIQTEEKNAIHKEASDFSVDEADPHSNDNNGLKDDMTNNDREETMCSISECENPA
AEQDHSSVSDQEDEHSDHYKSATCTWQESEIQHELQKSEEEIVTEKQTDNASENDEEADE
DEDFDAEPISSLQLHQEGEYSDHSESYKGQEVVAELDLQTLEEKSVGKNPTHPAEEKDDE
TDEHDDKQSNALDTDKDLDTQSHHCYLEDPSVKDFLRRESCKSEEKHKAQSEDSAGIEEA
DVDHDCHCVHPTVFPQQLLDFVNLALMSSALIFTYDSNGCLRIEPDRCKNRAMALCKSNV
DNQYARRCLPSPNTSDLSDYRPDTSDSGGDLSQVSTDLLTEGGEDEAERLFIYQGNMKQS
SENINRKVKTLDNGSKIPHLDTKQIANPNLKRINSLSSFPDSMVNNTMQDPVYHNSSDST
GNSELAQCLAFDAKADSGEGILIDKGRWLLKENHLIRKSPPVPMAMYENVDTTSVDTGQE
NTSEEAPYIPCGRKQSPRAVISSSELEDMAKPSTPKCTYFNMAHSSDSDPFLDNQSITSN
KGRGFTRKSKEVSPLGETSKMLAKKNGSLPSFASVEFKLAAGKVHPEDGMASSVVEKSAR
SQSCQIPEHARCNTSHEEESVEGLSLRCGQHCPIL
NT seq
6228 nt
NT seq
+upstream
nt +downstream
nt
atgaataccactccccatcatgacccacaacatccagatgttttcttggggagcacacag
actccaccctccagacccctacttgcatccaaagactcaaagagagtttgtttttacaag
agtggagacccgcagttttctggacactgggtagtcatcaacagtcgtacgttcaagact
tttgatgccctgctggacgccctttcaaacaaagtgcctctaccatttggggtacgcacc
atcacaacacccaaaggtacacacactatccggagcttagatgatctgcggcatggggcc
tcttatgtgtgctcagatcaaagaaaggtcaaacccctgaacctggacgagatcaaccgg
agacatgtcccctggaacagcaccagacctactagtgcaggacgtcagggacgcagagga
ctgatccggcagctagtaaagaagaatgaagtgggctggatggcaaaaatggctgaaagt
tctgtgacagtgaggacaccaaaaaggcttgtggtttttaagaacagggatcccagcact
aagcgcatagttgttttgcagaggaggacagctccgacttttgaggctctcttggaatac
ctttcccaagtgatgcagttctctgtggttaagctatacactgctgatggcagacgcgtt
gaaggtcttccagccctgatcctgtgctctggtgtcattgtagcagctggtaatgaaccc
tttcagctggctaacttcaatctccaagcatccactcaaccctcacactcagtcatatct
gaaactacggggccaacaaagacacagccattgccacttcaacaaaaatcagagagcagt
agaccaagatcaagaaatttctcattatcatcagaaagatattttgtaaatcagatcaat
atgtcactaaatggaagtcactcagaggacaatgaagtgaaaataggatcgatggtgagt
gtgaacaaccaagccctagaatcagaagagatggagaaatgtgacttcatgtctggtata
gaggaacaggatcgcttaattataccttcagatgatgagattgagaaatcatttcgtgtg
aatcaggatggcagcatgactgtggagatgaaagttcatctcactataaagcaagaggag
atgattcactggaccaccacagtgagtcgaacctgcgttaatagccaggacatggcagca
ttctcgcaaccagtctcaagctacaactccccagataataaagacaataataacagaaaa
agagagtcaaatatagacaactatgaatctaaagatgagaatacaaaaacttataaacca
atcaacttaaataaggagggagacaatcactgtggaaataccatcactgaggccttggaa
aaaccaaaaccgcgtttcaggaggctgcctactccaggacctaggcgtgtcagaaggaag
gagacttcaatggagaatataaagaggctatcacaaactgaggttcaggaaagcacagct
ggtacatactcatatgtggagcacacagctgaaggtgagctactggaagggtactgtgtt
gtcagtcatagcagctctagcagtacaagacctgtaccaaaacccaggaagaaaaatttg
ggagaatccaagcacaataagactcactcctctctctcagggatggcagaggttcttcaa
ctgcacaacaaaggaaaagagattacagaaactgtaatgcatattcatcagtcacaggat
acatatgaaaactattttgcaaaaacctgggctgataaggatgacaggtttgaatttatg
tctcaagaacacaaaaagccagactcaactgaatcagggcctcaatcttcaagcaatggc
tgtgacactgatcttaccaaaccgtctgcaagttctggttctgggaatgctaggaacaaa
gaactcttatctttgctgtctggccaaacagacctttcacaaacaataagcagcagtgca
tcctccttcaccaactatgaaactcaagctagatgtgaatcctcagacaaaggagtggag
acatccactaaagaggactctgaaaataaaagagttccaagtaagaagacaaaaaaggca
caaaaatctggaaggtcaaacaaacgtgtgtttttgcaaagcactgtgacagataaaaag
cagaaaggtagtgttccagactttttaaaagacctaaagaacagcgattctccagaatca
cagagctgtacagaaagtgacaaatacgggcaaaaggttaaaaagagaaaggaaggtcgg
tcacctcagaaggtaaacacatgtcatggtaacatgttgagggacacatctcaatatata
aacttaggtcatactcacatgttaaggcctcacatgaaagaaaaattagatattatccca
tcgtctcattcagcacctttcaagattttgacaaagcaaaggtctgtgaatggcagcgta
acaaaatctcctaaagagagcaaggagttgagtgaaagtatttctatgccagtgctcaat
tcatctccctgtaacgtgcaccaatatgtggaaaactggctggaaaaaattcaccctgaa
tcagtgccctatatggatgagttaaactcacatgaagctagagctaggttccagattgaa
agtgagttctcagacatttcagaaatgagaagcgaattagacaacagtttggtggagaac
tgtgcctctgttgcaggctctactgtcaagaagccagtgtcacgacgacttgtacaaatt
aggtatgagggagaacctgtggaggcaaagaaccctagaagatcctggaaatcaatgcca
agtgtgagaatacacactgctgaacaggagattggcacaagaaagaataagtcttcagag
gacttggttcccaaattgccagatgcagggggtgaaacatcaccaaacacacagttgaac
cctaggtcaggtatgaaacaagttttggagcagttatgtttatctatccagtttatcaga
aaagcctgtagtcattctcatctatcatccttgaagaagaagcagaaatccagtagcctt
cctgacttctcatcacagttagcctctgtttttggctctccatctgaggcacttctctcc
ttcctgacactgatgactctgagagatggaatagccaactctgccaatgaagtctcaggt
tctgccaatgctaataactcaggcagcaatccagaggctctgcaggtcatgcaatccata
caaaaattggccagcatagaggatgaagaagagcttaaggctagcctggcaagtctccac
agttcaacttctgctcagttaaagaagagctggagagatttccaagagaaaaataatatc
aaagaaagtcctccactgtcaccaagacagtcagagcaagagtttgctcttgaggtcaac
tcagaagaggaagctcaagataaagggcatatttttggtatcagagagataatggatgag
cttaacatgtgtgaggatctccgcagagagatttcctcacttgttaggggtgatttgaca
aatttcaataaagcaagacccactatggagcattttggtcatgaaaacgaaaccaccaat
actgcttgtgagaacgaggatgccactatgcaagacgatttatgggggtacttagaggaa
gaaagaagatatttagaggagagggaaagtcaatatgatgatattacaaatactaagcct
gcagatctagccaaagaatctgaagaattacacctactcaaatcaatttcccataagcca
gcacttctgagtaaagagccagctatggaagaatcggacataaggaaaaatgtccaaatt
gaggatatgtctaaccaaaatggactagttgcatatataactgaaattgtggatgatgtc
aagacaaaccaggaaaggtatgtagataatgaaccaagcaaagcagatctatgtgaggag
aaacaggagatgatggacaatgtccaaatgattgaggaaaagtacacagaggttgagata
agccaggttgatgagtttcaggtgccagataacagtataaccaatctggaagacaaagtg
gaatggcaagaaaatgtaggttgtatgcaatctgaatctgaactgctttctcccacttca
gaaatagaggcaaaagatgtcagagaggtgattgataacactgtcagtaaaatgggagat
tgtacagaaggatgtggcataaattcaaaggaggaagacacctactctgaaaccagggaa
tatcctaaacagccagatataatgtcagtggcttcagaaacagagactgaagaggcacac
cacccaaataatggcactatccaaacagaagagaagaatgcaatacacaaagaggcatcc
gactttagtgtagatgaagctgatccacacagtaatgataataatggcctaaaggacgat
atgactaacaatgaccgtgaagaaacaatgtgtagcatatcagaatgtgaaaatccagct
gctgaacaagaccattcttcagtgtctgatcaagaggatgaacactctgaccactacaag
tcagcaacttgcacatggcaagaatcagaaattcaacatgagctccagaaatcagaggag
gaaattgtcactgagaaacagactgataatgctagtgagaatgatgaagaagcagatgag
gatgaagattttgatgcagaaccaatctcttctctccagcttcatcaagaaggtgaatat
tccgaccactcagagtcttataaaggtcaggaagtggtagctgaacttgacctccagaca
ttggaggagaaaagtgttggtaagaatccgactcatcctgctgaggagaaagatgatgaa
acagatgaacatgatgacaagcagagcaatgctttagatactgacaaagacttagatact
cagtcacaccactgctacttggaagatccttcagtcaaagactttctgaggagggaatca
tgcaaaagtgaggaaaaacacaaagcccagtcagaggattctgcaggaatagaagaagca
gatgtggatcacgattgtcattgtgtgcatcctacggtgttcccccagcagctgctggat
tttgtcaacttagcactgatgtcctctgctctgattttcacatatgattcaaatggctgt
ctacgaatcgagccagacagatgcaaaaacagagcaatggctttatgtaaaagcaatgta
gacaatcagtatgctaggagatgtcttcctagccccaacacatctgacctctctgattac
aggcctgatacatcagacagtggaggagacctgtcccaggtttccacagatcttttaacc
gagggtggagaggatgaggcagagaggctgttcatttaccaaggcaacatgaagcaaagc
tctgagaacatcaacagaaaagttaaaaccctggataatggttcaaagatacctcatctt
gacacaaaacaaatagctaaccctaatttaaagaggatcaacagtcttagctcttttcct
gactccatggttaacaatactatgcaggacccggtctatcacaactcttcagactctact
gggaattctgagcttgcacagtgtctagcctttgatgcaaaggctgactctggggaagga
atcctgatagataagggcaggtggcttcttaaagaaaatcacctcattcgtaaatctcct
cctgttccaatggcaatgtatgaaaatgtagatacaacatcggttgacacaggtcaagaa
aacacaagtgaggaagccccctacataccttgtgggagaaaacagtccccaagagctgtc
atatcctcttctgagctggaagacatggccaagccttccacacccaagtgtacatacttc
aacatggctcacagtagtgactctgaccctttcctggataaccagagcattacgagtaac
aaaggaagaggtttcactcgaaaaagcaaggaagtatcaccactaggagaaacatcgaaa
atgttggcaaagaaaaatggaagcctcccctcttttgcatctgttgagttcaaactggcc
gccggaaaagtccatcccgaggacggcatggcatctagtgtggtggagaaatctgccaga
tcccagagctgccagatcccagagcatgcaagatgcaacacatcacatgaagaagagtca
gtagagggtttgagtcttagatgtggacagcattgcccaatactgtaa
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