KEGG   Pangasianodon hypophthalmus (striped catfish): 113540021
Entry
113540021         CDS       T05759                                 
Name
(RefSeq) poly(U)-binding-splicing factor PUF60-B-like isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113540021
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:phyp03041]
    113540021
Spliceosome [BR:phyp03041]
 Complex A
  U2 snRNP components
   U2 related factors
    113540021
 Complex B
    113540021
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 113540021
NCBI-ProteinID: XP_026791989
LinkDB
Position
Unknown
AA seq 522 aa
MMENGQGTGSKLGLPPLTPEQQEALQRAKKYAMEQSIKSVLVKQTIAHQQQQLTNLQMAA
VTMGFGDPLSPFQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSW
DSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPGNIGQAQPIIDQLAEEA
RAYNRIYVASVHPDLSDDDIKSVFEAFGKIKACMLAREHTTGKHKGYCFIEYEKPQSAID
AVSSMNLFDLGGQYLRVGKAVTPPMPLLTPTTPGGLPPAAAVAAAAATAKITAQEAVAGA
SVLGSLASPAQLLSQQIGLPQAVLAAQAPGLITGVTPVRPTLPVVPQVGLVNPVLASPPI
TSSATSTGTPTSTTQQQPEVKREVQDKQQEKDEARADAAEQRSVNEQEQIRSSEGSPTVT
HSGSTVMVLRNMVGPEDIDDDLEGEVTEECGKFGAVNRVIIYQERQGEEDDAEIIVKIFV
EFSDSGEMNKAIQALNNRWFAGRKVVAEVYDQERFNKSDLSA
NT seq 1569 nt   +upstreamnt  +downstreamnt
atgatggagaatggtcaaggcacaggctccaagctgggcctgccacccctcactccagag
cagcaggaggcactgcagagggcgaagaaatatgctatggagcagagcattaagagtgtc
ctggtgaagcaaaccatagctcaccaacagcagcagcttactaacctgcagatggcagca
gtgactatgggctttggagatcctctctcaccctttcaatcggtggcagcacagaggcag
cgagctctcgccatcatgtgtcgcgtctatgtgggttccatctattacgagctcggtgag
gacaccattcggcaggcttttgccccgttcggcccaatcaagagcatcgacatgtcctgg
gactctgtcaccatgaaacacaagggctttgcctttgtggagtatgaggtgcctgaggct
gctcagctggctctggagcagatgaactctgtcatgctgggtggaaggaacattaaggtg
gggcggccaggtaacatcggacaggcgcagcccatcattgaccagctggcagaggaggca
cgcgcatacaatcgcatttatgtagcctcagtgcacccggacctgtccgatgacgacatc
aagagcgtctttgaggccttcggcaagattaaagcctgcatgctggcccgagagcacacc
acagggaagcacaaaggctactgcttcatcgaatatgaaaagcctcagtcagcaatagat
gcagtgtcctccatgaacctgttcgacctgggaggccagtacctgagggtggggaaggcc
gtgactcctcccatgcccctgctgaccccgacgacccccggaggtttgcctcctgctgcg
gctgtggctgctgccgctgccactgctaaaatcacagcccaggaggctgtcgcaggggcg
tctgtactgggctcactggcgtctcccgctcagctcctcagccagcagataggactccct
caggctgtactggcagcgcaggccccaggcttgattacaggtgtcacgcccgttcggccg
actctgcccgtggtgcctcaggtgggcctggtaaaccccgtgctggcgtcgccacccatc
acatccagtgccacgtccacaggaacaccaacaagcacaactcagcagcagcccgaggtt
aagagggaggtacaggacaagcagcaggagaaagacgaagctcgagcagatgccgcggag
caaaggagcgtgaatgagcaggagcagatcagaagcagtgagggcagccccacagtcaca
cactcagggtctacagtaatggtgttgcgcaacatggtgggccctgaagacatagacgat
gacttggagggggaggtgacggaggaatgcggaaagtttggtgccgtgaaccgggtcatc
atctaccaggaacgtcagggcgaggaagacgacgccgagatcatcgttaagatcttcgtg
gagttctctgacagtggtgaaatgaataaggccatccaggccctgaacaaccggtggttt
gcgggtcgtaaggtcgtggctgaagtctacgatcaggagcgtttcaataaaagcgacctt
tcggcataa

DBGET integrated database retrieval system