Pangasianodon hypophthalmus (striped catfish): 113540186
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Entry
113540186 CDS
T05759
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113540186 (fubp1)
03041 Spliceosome [BR:
phyp03041
]
113540186 (fubp1)
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
113540186 (fubp1)
Spliceosome [BR:
phyp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113540186 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
Secretin_N
Motif
Other DBs
NCBI-GeneID:
113540186
NCBI-ProteinID:
XP_026792285
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MADYTSVAPPSNNAGGGMNDAFKDALQRARQIAAKIGGDGVNPPPAANEFAYGGQKRPLE
DGDQPETKKVASDPFAAMGGMAGLPRPTSEEFKVPDGMVGFIIGRGGEQISRIQQESGCK
IQIAPDSGGMPERSVTLTGSPDSILTAKRLLTEIVEKGRPTPFHHNDGPGMSVQEIMIPA
SKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRISGDPFKVQQAKDMVMDL
IRDQGFREQRGEYGSRMGGGEGLDVPVPRFAVGIVIGRNGEMIKKIQNDTGVKIQFKPDD
GTTPDRIAQIMGPPDRAQHAASIITDLLRSVQAGGPPGPGGRGRGRGHGNWNMGPPGGLQ
EFSFTVPTVKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNIKMFTVRGTPQQID
YARQLVEEKIGGPVSPMGGPHGPPGPHGGPAPHGPPGPPGPPAPMGPYNPGPYNQGPPGP
HGPPGPYQPQGWGNGYPHWQQGQPDPNKAAADANAAAWAAYYAQYQQQPQAPMTPTSAAA
PGTTPANGQGDPQAPGQSGQADYTKAWEEYYKKMGQQGQQPQDYTKAWEEYYKKQGQAAP
QAAGASSSQPGGQPDYSAAWAEYYRQQAAYYGQGASQPMGAAPPAQQVHS
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggctgattacacgagtgtggcgccgccgtctaataacgccggcggaggaatgaacgac
gcttttaaagatgcactacaacgggcgagacagatagcagctaaaatcggaggtgatgga
gttaatccacctcctgctgccaacgagtttgcatatggagggcagaaaaggcctttggaa
gacggcgatcagccagaaacaaagaaagtcgcaagtgacccttttgctgcaatgggagga
atggctggtcttccaaggcctacatcagaagagttcaaggttccagacggcatggttggc
tttattatcggaagaggaggagagcagatttcaaggatacaacaggaatcgggatgtaag
atacagatcgctccagacagcggcggcatgcctgagcgctctgtgacgttaacaggctct
ccagattccatcctaactgcaaagaggttactgacagagatcgtggaaaagggcagacca
actccgtttcatcacaacgacgggcctggaatgtcggttcaggaaattatgatcccggcg
tccaaagcgggcctcgtcatcggaaagggaggagagacgatcaaacagttacaggagcga
gccggggtcaagatggtcatgattcaggacggacctcagaacaccggagcggacaaaccg
ctcaggatttctggagatccttttaaagttcagcaagcaaaagacatggtgatggacctg
atcagagaccagggtttccgagagcagaggggcgaatacggatcacggatgggtggtgga
gaaggtttggatgttcctgtgccgcgcttcgcagtggggattgtgatcggcaggaacggc
gaaatgatcaagaagattcagaacgacaccggtgttaagattcagttcaaaccagacgac
ggcaccacaccagacaggatcgctcagatcatgggtccccctgatcgggcgcagcatgca
gccagcatcattacagacctgttgcgcagtgtgcaggctggcggtccaccaggccccggg
ggcaggggcagaggtcgtggccacggtaactggaacatggggccaccagggggcctgcag
gagttctccttcactgttcccaccgttaagaccggccttattattggcaaaggaggtgag
acgattaaaagcataagccagcagtccggagccagaatagagttgcagaggaatcctcct
cccaacgccgaccccaatataaagatgttcacggtgcgcgggactccgcagcagatcgac
tacgccagacagctcgttgaagagaagatcgggggtcctgtcagccctatgggtggacct
catggaccaccagggccgcatggaggccccgcgccacacggtcccccaggcccacctgga
cctcctgcacctatggggccttacaatcccgggccttacaaccagggaccccctggacca
catggtcctcctgggccgtaccaacctcagggctggggtaacggctaccctcactggcag
cagggccagcccgatcccaataaagcagccgcggatgctaacgcagcagcgtgggctgcg
tattacgctcagtaccagcagcagcctcaggctcccatgacgcccaccagcgccgctgcc
ccgggcacgactccagccaacggtcaaggtgacccgcaggctccaggtcagagcggacag
gcagattacaccaaggcctgggaagaatattacaagaaaatgggtcaacaaggccagcag
ccacaggattacaccaaagcgtgggaggagtactataagaaacaaggccaggcagcccct
caggcggccggggcgagctcctctcagcccggaggccagccggactacagcgccgcgtgg
gctgagtattaccgccagcaagcagcctattacggccagggcgcctctcagcccatggga
gcagcaccgccggcccagcaggtacactcctaa
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