Pangasianodon hypophthalmus (striped catfish): 113540248
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Entry
113540248 CDS
T05759
Symbol
sec24d
Name
(RefSeq) protein transport protein Sec24D
KO
K14007
protein transport protein SEC24
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113540248 (sec24d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113540248 (sec24d)
Membrane trafficking [BR:
phyp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
113540248 (sec24d)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
113540248
NCBI-ProteinID:
XP_026792402
LinkDB
All DBs
Position
Unknown
AA seq
1022 aa
AA seq
DB search
MSQQGYVATPPYSQAQAGMGGYPTAFGAPPPQSHYGHYGAPPQSFPPQPTGMLKPAASSP
SGMPPPPVSSQYGSPIQQNGAHPQKFPPTPAVSAPAMSPYGQPPQRPYHSMAPAMPPTQQ
IANQMSAMNIDGYAQSPVQSPQSLAAPQPFQMSPPPTMGHPPMSPPGTQPLSMGTCPPMA
ASPPMSAAGPPPMGLSNSRPHPPPLSGAGFQQPPAPQGFPPQQPGLYGGQMPGSPMTGPQ
PGAFPGGFPGGAANMAGPPQKKLDPDSIPSTNESLPSRIKKRSYFLAKLFIVVSGNASPR
FIRCTTYSFPCTSDLAKQWQVPLAAVIKPFATVPKNETPLYIVNHGETGPIRCNRCKAYM
CPFMLFIDGGRRFQCGFCNCVNEVPVQYFQHLDHMGRRVDVYERPELSLGSYEFAATLDY
CRNNKPPNPPAYIFMIDVSYNNIKSGLVKLICEELKSLLERLPKEEGAESSAIRVGFVTY
NKILHFYNVKSALAQPQMMVVSDVADMFVPLLDGFLVSFQESRAVINNLLSQIPDMYADT
NESETVFAPVIQAGVEALKAAECSGKLFVFHSSLPTAEAPGKLKNRDDRKLVNTEKEKTL
FQSQRGVYEQLTKECVSQGCCVDLFLFPNQYVDLATMGDIPTHTGGSVYKYSNFQVQTDG
QHFLSDLRRDVEKSIGFDAIMRVRTNTGFRATDFFGAIYMNTTTDVEMAAVDCDKAVTVE
FKHDDTLSEEAGALIQCAVLYTSVSGQRRLRVHNLSLNCSSQLSELYKSCETDALINFFA
KSAYHAILSQPVRTVREILVRQTAHMLACYRKNCATPSAASQLILPDAMKVFPVYMNSLM
KTPVLVGSTELSTDDRAFHRLSIMSMGVEESQVLLYPQLIPVHSMDVACDSIPAAVRCSE
ERLSDTGVFLLENGQSMFLWLGQACPPDLIQSLFNVPSMAHLSSDMTTLPELDNAHSGKL
QSIICAISQQRCKSMKMVIVKQKDRSEMLFRQLLVEDKGLYGGTSYLEFLCSVHREIRQL
LS
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcagggttatgttgctacgcctccgtactcgcaggcccaggcgggaatgggg
ggataccccactgcattcggggctccccctccacaatcccattatgggcactatggagct
ccaccacagtcctttcctccacaaccaacaggtatgctcaaaccagctgcctcctctcct
tctgggatgcctccaccacctgtgtctagccaatatggatctcctattcaacaaaatggc
gcacacccacagaagttccctcccactccagcagtctctgcacctgccatgtctccctat
ggacaaccccctcaaagaccataccacagcatggctccggccatgcctccaacccaacaa
atagccaatcagatgagtgctatgaacattgatggatatgcccaaagccctgtgcaatct
cctcagtctttagcagcaccacagccgttccaaatgtctccaccaccaacaatgggacat
ccacccatgtctcctccaggcactcagcctctctcgatgggtacatgtccaccaatggca
gctagtccacccatgagtgcagcagggcctccgccaatgggattgtctaattcacggcct
caccctcctccactgagtggagctggattccaacagccaccagcacctcagggatttcct
cctcagcagccaggattatatggaggacagatgcccgggtcaccgatgacagggcctcag
ccaggcgcttttccaggaggtttccctggaggagctgccaacatggctggaccccctcag
aagaaactcgatccagactccatacctagcacaaatgaatctcttcctagtagaataaaa
aaaagaagttatttcttagccaaattgtttattgttgtttcaggaaatgctagcccaagg
ttcattcgttgcactacctactcatttccctgtacctctgaccttgccaagcagtggcaa
gtgcctctggcggccgtcatcaaaccttttgccacagtgcccaaaaatgagactcctcta
tacatagtaaatcatggtgagacaggacccatacgctgtaaccgctgtaaggcctacatg
tgcccctttatgctcttcattgacggtggaaggcgcttccagtgtggcttctgcaattgt
gttaacgaggttcctgtccagtatttccagcacctggaccatatgggccgaagagtggat
gtatatgaaagaccagagctgtccctgggttcttatgagtttgctgctacgctggattac
tgcagaaacaataagcctcccaatcctcctgcttatatcttcatgatcgatgtctcctac
aacaacataaagagtggacttgtcaaacttatatgtgaggaactgaagtcactgctggaa
cgacttccaaaagaggagggagctgagagctcagccatcagagtgggctttgtcacctac
aacaagatcctgcacttctacaatgtgaagagtgcactagctcagccccagatgatggtg
gtctctgatgtggcagatatgtttgtgccccttctggatggattcctggtcagctttcag
gaatcacgagctgtcatcaacaatctgttgagccagatccctgacatgtatgctgacaca
aacgagagtgaaactgtttttgctccagttattcaagctggagtggaagcactgaaggct
gctgaatgcagtggaaagctcttcgtcttccactcctccctcccaactgcagaggcacct
gggaagctgaagaacagagatgacaggaagctggtgaacacagagaaagaaaagactctg
tttcagtcacagcgcggtgtgtatgagcagctgactaaagagtgtgtgagccagggatgc
tgcgtggacctcttcttgttccctaaccagtatgtggacttggccactatgggtgacatt
cccacacacactggcggctcagtttacaaatatagcaacttccaggttcagacagatggt
cagcatttcctcagtgatctgagacgagacgtggagaagtccattggatttgatgccata
atgcgtgttcgaaccaacacaggtttcagggccacagacttctttggtgccatctatatg
aacacaactacagatgtggagatggctgcagtggactgtgacaaagcagttacagtggag
tttaagcatgatgacacactcagtgaggaggctggggcacttatacagtgtgctgtgctg
tacacctccgtcagtggacagaggcgactgcgcgttcacaacctcagtctgaactgcagc
tctcagctatctgagctctacaagagctgtgagactgatgcactcatcaacttctttgcc
aagtcagcataccatgctatactaagccagccggtgcggacggtgagggagatcttggtg
aggcagacagctcatatgctggcgtgctataggaagaactgtgctacaccttctgctgca
agtcagctgatcctgccggatgctatgaaagtgttcccggtgtacatgaacagcctgatg
aagactccagttctggtgggcagcactgaactctctacagatgacagggctttccataga
ctcagcatcatgtccatgggagtggaggagagccaggtcttgctatacccacagctcatt
ccagtgcactccatggacgtggcgtgtgattcgattccggcagcagtgcgctgctctgag
gagcgtttgagtgatacaggtgtgtttttgctggagaatggccagtctatgttcctgtgg
ctgggccaggcctgccctcctgacctcatccagagcctcttcaatgtgccctccatggcc
catctcagttcagacatgactacattgcctgaactagataacgctcactctgggaagctt
cagtccatcatttgtgccatctcccagcagcggtgcaagtccatgaagatggtgattgtg
aagcagaaagacagatcagagatgctgttccgccagctcctagtggaggataaaggcctg
tatggaggaacttcgtacttggaattcttgtgctcggttcaccgtgagattaggcagctt
ctgtcctaa
DBGET
integrated database retrieval system
