Pangasianodon hypophthalmus (striped catfish): 113540249
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Entry
113540249 CDS
T05759
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
113540249 (scrib)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_14
LRR_8
LRR_4
PDZ_2
LRR_1
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
113540249
NCBI-ProteinID:
XP_026792403
LinkDB
All DBs
Position
Unknown
AA seq
2054 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLHTVPDEIYRYTRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPETIKFCKALEIADFSGNPLSRL
PDGFTQLRALAHLALNDVSLQSLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLD
LGSNQLEVLPDALGALPNLRELWLDRNQLSSLPPELGSLRRLVCLDVSENRLTELPSEIS
GLIALTDLLLSQNHLDAVPDSIGSLKQLSIFKVDQNRLVRLTDSIGECENLTELMLTENL
LQSLPSSLGKLKKLTNLNVDRNRLSSVPAELGGCASLSVLSLRDNRVGKLPAELANATEL
HVLDVAGNRLQNLPFSLANLNLKAMWLAENQSQPMLKFQTEDDEQTGEKVLTCYLLPQQP
TPSLENLLQSSVDESWPTDTNLNRVSVIQFQDQTKADEEDDETAAERRQGLQRRATPHPS
ELKVMKNVIEARRNEAYTAKPDEDLDSPDTDEKRMSGLSNQSHDSQVSNSTASATSHDET
QKVNGIEVELNERHDHEQEDEEEDAEYTEPTVHFAEEPIIRGGDEDDEDENEDDEDGEHS
DDEARSAPFPAEKQRLIRKDTPHYKKHFKITKLPKPEAVAALLEGFSPDAPTSVPRIPSE
EKDGEQEEEEDEEGASVNTPLLRRLEAAEQEDSRLTQVNSSLQPVKGVSFDQVNNLLIEP
ARIEEEELVLSILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEDGPAARAGVKVGDK
LLEVNGVDLQGAEHHTAVEALRSSGTAVTMTVLRERMVEPENPITTTPLRPEDDYFPRER
RSTGLPFSLEPGSTAVSTGPCQRLATCLVRNDKGLGFSIAGGKGSTPYRTGDMGIFISRI
AEGGAAHRDNILHVGDRVISINGVDMTEARHDQAVALLTGTSPTISLLVEREQASSGGSS
GRARSHSPPPPEPSDSPEQEEAGDDRLGNHLSCPMEDEYPIEEVTLVKTGGPLGLSIVGG
SDHASHPFGISEPGVFISKVIPHGLACQSGLRVGDRILEVNSIDLRHATHQEAVKALLSN
NKEIRMLVRRDPSPPGMQEIVIHKQPGEKLGISIRGGARGHAGNPFDPTDEGIFISKVSS
CGAAARDGRLKVGMRILEVGNHSLLGMTHTEAVRVLRATGDTLVMLVCDGFDPRNVAGTE
ASPGVIANPFAAGIVRKNSMESISSIDRDLSPEEMDIMQKEVEMVRETSQWEREEMEKVE
RMRLEREAATRLLEEETESMSTGPLKLDYKTLAALPTTSLQRVNRLSSTFTESCPMESAL
QARPSGTIEPLCFEKAHATLYHVDAPVLPSSSLCSITTSAAPKQTTAMPQDPSPAPTVTQ
EAQEEECLVDSQPICFKENPFLVANRKSKGRPLEERILSGPPTGYGRQGQLQTWLYNKAP
SAEPPRIDSPVREPLYSPGSQLPSFRQSSSSTPVAQGRETRFASIHLSSNVAAKDNSATK
PGAIQPISRVRPPASPVSQDGHSSPNPFQHGPSPINSQTTPRAPSPDTFNEFPINVKQAY
KAFAAVPHSMAVLEPPQDLYGQRNNFHPKQTLPEPEECNEVFIGEGERGGLSPRPSLSSD
RREYRNLAAVPRLSRPSLESKPPTSCGRRSPEQRSFRDRQKYFEIDVKQQTPDSKPKPRV
SLVGEDDLKKMKEEEAKRIEQSAREYLLDEDEDDEEEDLAKQVAQMKAQGKVILDGVEYK
VESVSSHSSTPPRQCVTPPNYSAMSPSYCGSSGTSSVDGRSDSQRNSMEDSFRLEQRPNS
MTGLIPVYPGESAAPIRTAKAERRHQERLRVQSPELSVAPDKDLSPAEKRALEAEKRAMW
RAARPYGLEEDVRQYEQDLAKRLYQSRVRASLDSAAAPPSTCSSSSQPRMKSLEQDALKA
QMVIAKSKEGRKRGTLDQLAESPSPAPTPSPTPMEDVSPRAVTSPGRLSLSEKKFDYRQF
AAIPSSKPVYDIQSPDATDVRFNSDVSTSPVSCVEADVPVAPVAATSALEEMALYSNKRK
LRQGRRSLETAVPT
NT seq
6165 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagtgcatccctctctggcggtgtaaccgccacgttgagtcggtggataagcgg
cactgctctctgcacactgtgcccgatgagatctaccgctacacccgcagcctggaggag
ctcctgctcgatgccaaccagctccgagaactgcccaagcccttcttcaggctactgaac
ctgcgcaagctaggcctgagtgacaatgagatccagagacttccccctgaggtggccaac
ttcatgcagctagtggagctggacatctctcgaaatgacattcctgagatccccgagacc
attaagttctgcaaggcgttggagattgcggacttcagtggaaaccccctctccagatta
cctgatggctttacacagcttagagcactagcccaccttgcactcaatgacgtgtcacta
caatcactaccgaatgatattggaaacttggctaacctggtaaccctggagctgagggag
aatctactgaagtctttacccacctctctgtctttcctggttaaactggaacagctagat
ttgggcagcaatcaactggaagtattgccggacgcactgggggcgctgcccaacctccgt
gagctgtggttggacaggaaccaactttcttcactccccccagagctgggaagtttgcgg
agattggtgtgtctggatgtgtcagagaaccggctcacagagttgccgtccgagatcagt
ggcctcatcgccctcactgacctgctgctctcacagaaccacctggatgccgtgcctgac
agcatcggctccttgaagcaattatctatcttcaaagtggaccagaaccgcctggtgcgt
ctaacagattcaatcggcgaatgtgagaacctcacagagctgatgctgacagagaatctg
ctgcagtctcttccaagttctctgggaaagttaaagaagttgaccaacctgaatgtggac
cgtaaccgcttgagcagcgtaccagctgaattgggtggctgtgccagtctcagtgtgctc
tcgctcagagacaaccgcgtgggcaagctgcctgctgagctcgcgaatgccacagagcta
catgtgctggatgtggcaggcaacaggctgcagaacctaccgttctcgctagccaatctg
aacctcaaggccatgtggctggcagaaaaccagtcccaacccatgctcaagtttcagact
gaggacgacgagcagacgggagagaaggtcctcacctgctacctgctgccccaacagcct
acacccagcttagagaacctgctgcagagcagcgtggacgaaagttggcccacagacact
aatctgaacagagtgtccgtcatccagttccaggaccaaaccaaggctgatgaggaagat
gatgagactgcagcagagaggaggcagggcctgcagaggcgagccacccctcatcccagc
gagctgaaagtgatgaagaatgtgatcgaggccagaagaaacgaggcttacacagctaag
ccagatgaagacctggactccccagacactgatgagaaacgtatgagtggattgtccaat
cagagccacgactcccaggtctctaacagcactgcctcagctacctctcatgatgagacg
caaaaagtaaatggcattgaggtggagcttaatgaaagacatgatcacgaacaggaagac
gaggaagaggacgcagaatacactgagcctactgtgcactttgctgaggagcccattatc
cgaggcggtgatgaggatgatgaggatgaaaacgaggacgacgaagacggcgagcatagc
gacgacgaggctcggtcagcccccttccctgctgagaaacagcgcctcatccgcaaggat
acaccacactacaagaagcacttcaagatcaccaaactgcccaaacctgaggctgtagct
gcgttactggagggcttcagccctgacgcccccacatcagtcccccgaatacccagcgaa
gagaaggatggggagcaggaagaggaggaggatgaagagggagcatcagttaacacccct
ctgttgcggagactagaggcggctgagcaagaggacagcaggctgactcaggtgaacagc
tcgctgcagccggtgaagggggtgtcatttgatcaagtcaataatctgctgattgagcct
gctcgaattgaggaggaagagctggtcctgagcatcctaagacaaactggtggattaggc
atcagtatagctggggggaaaggatccactccttacaagggagatgatgagggtatcttt
atctcccgagtgtcagaagatggtccagctgcacgagctggggtcaaagtgggagacaaa
ttacttgaggtaaacggggtagatctgcagggagcagagcaccacacggcagtggaggcc
ttacggagctcaggaacggcagtgaccatgactgtgcttcgtgagcgaatggtagagcct
gagaaccctatcaccactacacccctgagacccgaggatgattacttcccccgggagagg
aggtccactggccttccattcagcctggagcctggatccactgccgttagcacgggcccc
tgccagcgcctggccacctgcttagtccgcaacgacaaaggcttaggcttcagcatcgct
gggggaaaaggctccacaccgtatcggactggagacatgggaatcttcatctctcgcatt
gctgaaggaggtgctgctcacagagacaacatccttcacgtgggagacagagtcatatct
atcaatggtgtagacatgacagaagccagacatgaccaggcagtagcgctgcttaccggc
acctcccccaccatctcgctgctagtggagcgggaacaagcgagctcgggcggctcctca
ggccgagcacgctcccactctcctcctcctccggagccctcagactcaccagagcaagaa
gaggcaggagatgaccgcctggggaaccatctcagctgtcctatggaggatgagtacccc
atagaggaagtgacactggtcaaaacaggtggtcctctgggtctgagcattgtgggtggc
agtgaccatgccagccatccatttggcatcagtgaaccaggagtgtttatttcaaaggtg
atccctcatggcctagcctgtcagagtggattacgtgtaggtgaccgcatcctagaggta
aactccattgacctgcgacacgccacccaccaggaggctgtcaaagccctgctgtccaac
aacaaggagatccgcatgctagtgcgcagagacccctcaccacctggcatgcaggaaatt
gtcattcacaagcagcctggagagaagctgggcatcagcatccgaggaggagccagaggg
catgccggcaacccatttgatccaacagatgaaggcatcttcatctccaaggtgagctct
tgtggtgctgcagcacgagatggccgcctgaaggtggggatgagaatcctggaggtgggc
aatcacagtctccttggaatgactcatacggaagcagtcagggtcttgcgtgccacagga
gatacactggtcatgctggtgtgtgatggctttgaccccagaaacgtcgctggcacagag
gcatctccgggtgtcattgcgaacccatttgctgctggaattgttcgaaagaacagcatg
gagagcatctcctcaatagacagagatctgagcccagaagagatggacatcatgcagaag
gaggttgagatggtgagagagacgtctcagtgggaacgggaggagatggagaaagtggag
cgtatgcgcttggagcgtgaagcggctactcgtctgctggaggaggagactgagagcatg
agcactggacctctgaaactggactacaagacactggcagctcttcccacaaccagcctg
cagagggtcaatcggctgtcttctacctttactgaatcctgtcccatggagagtgctctt
caggccaggccgtctggcactatagaacccctgtgctttgagaaagctcatgcaaccctg
taccatgtagatgcccctgtccttccctcatcctcactgtgctcaattacaacctcagca
gcacccaaacagaccacagctatgccacaggaccccagtccagcacccacagtcacacag
gaagcacaggaagaggagtgtcttgtggactctcagccaatctgtttcaaagaaaatccc
ttcctggtagctaatcgtaagagcaagggtcgtccccttgaggagcgcatcctttcaggg
ccgcccacaggctatggcaggcaggggcagcttcagacctggttgtataataaggctccc
tcagctgagcctccgagaattgacagtcctgtccgggagcctctttattccccaggttct
caattgccgtcatttcgacagtcctcatcctcaacccctgtcgcacaaggcagggagacc
cgattcgcaagcattcatttatcctccaatgtggctgccaaggacaattcagctaccaag
cctggtgccatccagcctatctcacgagtacggcctcctgcctctccagtcagtcaggat
ggtcacagtagtcccaaccctttccagcatggcccttcccccatcaactcccagaccact
cctcgtgccccatccccagatactttcaacgaatttcccatcaatgtcaagcaggcatat
aaggcgtttgctgctgtgccccactccatggctgtgctggagcccccacaggatctctat
ggtcagaggaacaactttcacccaaagcagacattgccagagccagaggagtgtaatgaa
gtgtttataggtgagggtgaaagagggggcctcagccctcgaccctccctctcatctgac
cgtcgtgagtacaggaatctggcagctgtgccacgcctgtctcgcccctccctggagtct
aagccccccacgtcctgcgggagaaggagcccagagcagcggtctttcagagacagacag
aagtactttgagattgatgtgaagcagcagacaccagacagcaaacccaaacctcgtgtt
tcacttgtaggagaggatgacctgaaaaaaatgaaggaggaggaagccaaaagaattgag
cagagcgcaagggagtatctgctggatgaggatgaggacgatgaagaggaagatttggcg
aagcaggtggcgcaaatgaaggcccagggcaaggttattctggatggggtagagtacaag
gttgagtctgtcagcagccactcttctactccacccaggcaatgtgtcacacctccaaac
tacagtgctatgtctcccagctactgtggcagctcagggacttcctctgtagatggtaga
agtgattcccagcgcaactctatggaggatagcttcagactggagcagagacccaactcc
atgactggcctgatccctgtgtacccgggtgagtctgcagctcccatccgtactgccaag
gctgagcgcaggcaccaggagaggctccgtgtgcagagcccagagctcagtgtggctcca
gacaaggatctttctcctgcagagaaaagggccctagaggcagagaagagagccatgtgg
agggcagccaggccttatggtctagaggaagacgttaggcagtatgagcaagacctggcc
aagaggctctaccagtcacgtgtgagggcgtcgttagacagtgctgcagctcctccctct
acctgctcctcttcctctcagcccaggatgaagtctttagagcaggatgctctcaaggct
cagatggtcattgctaagtccaaggaagggagaaagcgaggcacactggaccagttagct
gaatcgccatctcctgcacccacgccttcacccactcctatggaagatgtcagtccgcgc
gctgtgacatcaccaggtcgactgtccctgtcagaaaagaagtttgactaccgacaattc
gctgccattccttcttctaaacctgtatacgacattcagtctccagatgctacagatgtt
cgattcaacagtgatgtctccactagcccagtttcctgtgtagaagctgatgtgcctgta
gctcctgtggccgccacatctgctctggaggagatggctttgtacagcaacaagcgtaaa
ctccgacagggccgtcgcagtctagagacagccgttcccacataa
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