Pangasianodon hypophthalmus (striped catfish): 113540269
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Entry
113540269 CDS
T05759
Symbol
ptch2
Name
(RefSeq) protein patched homolog 2
KO
K11101
patched 2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
113540269 (ptch2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
113540269
NCBI-ProteinID:
XP_026792461
LinkDB
All DBs
Position
Unknown
AA seq
1453 aa
AA seq
DB search
MASAPRVAGADGFGVLPPSYTRSGNPDLTRRPSYCHAAFALKQIAKGKAAGQKAPLWLRA
RFQALLFTLGCHIQRHCGKVLFIGLLVFGAFSVGLRVAAIETDIEQLWVEAGSRVSRELR
YTKEKQGEEAVFTSQMLIQTPKQEGTNILTQEALLLHLEAAVSASKVQVSLYGKSWDLNK
ICFKSGVPVIENVMIERMIDKLFPCMIVTPLDCFWEGSKLQGGSAYLPGMPDIQWMNLDP
LKLMEELSQFTSLEGFKEMLDKAQVGHAYMNRPCLDPRDPDCPLSAPNKDLQQSPDIAVE
LQGGCHGFSKKFMHWQEELILGERMKNSQGFLQSAEALQTMFLLMSPKQLYEHFKDDYEI
HDINWNEDKATAILESWQRKFVEVVHGSIPQNSSSNVHAFSTTTLNDIMKSFSDVSVIRV
AGGYLLMLAYACVTMLRWDCAKSQGAVGLAGVLLVALSVAAGLGLCSLLGLSFNAATTQV
LPFLALGIGVDDMFLLAHSFTETGSNIPFKERTGDCLRRTGTSVALTSINNMIAFFMAAL
VPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSLDLHRRKDKRLDILCCFYSPCSSRVIQ
IQSQEFSDANDNHTHPHDPATPTFAGSTITTSTHITTTVQAFTQCDAAGQHIVTILPPTS
QISTSPPSVVLSPPDPRPAADPYGSQLFMPSSSTRDLLAQAEEPRLGRECVPLPFLQWNL
PRFAREKYAPLLLKPETKTMVVVVFVALLSLSLYGTTMVHDGLYLTDIVPRDTKEYDFIS
AQFKYFSFYNMYLVTMDGFDYAHSQRELLQLHNAFNSVKYIVRDSNQKLPRMWLHYFQDW
LRGLQAAFDADWEAGRITYDSYRNGTEDGALAYKLLIQTGSKKEPFNYSQLTSRRLVDND
GLIPQEVFYIYLTVWVSNDPLGYAASQANFYPHPHEWTHDKYDTTGENLRIPAAEPLEFA
QFPFYLNGLRQASDFIEAIESVRSICEEFMRKGIPNYPNGYPFLFWEQYIGLRHWFLLSV
SVVLACTFLVCAILLLNPWTAGIIVFILAMMTVELFGIMGLIGIKLSAIPVVILIASVGI
GVEFTVHVALGFLTAIGDRNTRSGVALEHMFAPVMDGAISTLLGVLMLAGSEFDFIMRYF
FAVLAILTLLGILNGLVLLPVLLSIMGPPAEVILANNASGLSSPSSEPVPRIMNNHGYYA
GHIPRAPRQAFTEVSDSEYYSETTNTSGIGDEDYKHCDRNAYITTPTLPPTSHILLEASK
NPSFPKLTVVKPYSEIPSATSPNDPPSEAAQNAVNSISSQVTRWDGKPEYQGSRRDPLPN
DSAYTHGRTTHCGPRLQQGRGPQQNRTKALPHGGNTLQQPSNTVTMVTATASVTVSVHPN
LPGSYQGSMHEVFEDSVSDSFENSKRTSQTYGRANQPSKRDSLQLQDLESLDNNQHQAKQ
GLGGTWTQTAKDC
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggctcccagagtggcgggggccgacgggtttggagttttacccccgagctac
acgcgctccggtaacccggacctcacccgcagacccagctactgccacgccgcgtttgcg
ctcaaacagatcgctaaggggaaggctgcgggtcagaaagctccgctgtggctccgggca
aggttccaggctctcctctttactctgggttgtcatattcagcgacactgtggaaaagtg
ctttttattggactcctcgtgtttggagccttctcggttggcctgcgagtggccgccatt
gagacagacattgaacagctatgggtggaagctggcagtagggtgagcagggaattgcgt
tacacaaaggagaagcaaggagaagaggcagtgttcacctcacagatgctcatacagaca
cccaaacaggaaggaaccaatattcttacccaggaagctttgttgctccacctggaggct
gctgtgtctgccagcaaagtccaggtgtctctttatggaaaatcctgggatcttaacaaa
atctgcttcaaatctggagtcccagttatagaaaatgtcatgattgagaggatgattgac
aagctattcccctgcatgattgtgaccccactggactgcttctgggagggctccaaactg
cagggaggctcagcgtacttaccggggatgcctgacattcagtggatgaatctggaccct
ctgaagctcatggaggagttgagccagttcacctcattagaaggtttcaaggagatgctg
gacaaggctcaagtaggccatgcctacatgaaccggccttgtcttgatcccagggaccca
gactgcccactcagtgcccccaacaaggacctgcagcagagtccagatattgctgtggaa
ctacagggtggctgccatggtttctcaaagaagttcatgcactggcaggaggagctgatc
ctgggggaacggatgaagaactcgcagggttttttgcagagtgcagaggctttgcagacc
atgtttctcctcatgagccccaagcagctatatgaacactttaaggatgactatgagatc
catgacatcaactggaatgaggataaggccactgccatcctggagtcctggcagagaaag
tttgttgaggtggtccatggaagcattccccagaactcctcctctaatgtccacgctttt
tctaccactacactcaatgacattatgaagtccttctccgatgtcagtgtcatcagggta
gcaggaggttacctgctcatgctggcctatgcatgtgtgaccatgctccgctgggactgt
gctaagagtcaaggggcagtggggctggctggagtgctgctggtggctctgtctgtagct
gcaggtttagggttatgctctctgctggggttgtctttcaacgccgccactacacaggtg
ctgccatttttggcactgggcataggggtggatgacatgttccttctggctcattctttc
actgagactggctccaacatccccttcaaggaaaggactggtgactgtctcagaaggact
ggcactagtgtggctctcacctctattaacaacatgattgccttcttcatggcagcccta
gtgcccattcctgcccttcgggctttctcattgcaggctgctgttgtggtggtatttaat
tttgctatggtcttgctcatcttccctgcaattctgagtctggatttgcatagacgcaag
gacaaaagactggacatcctttgttgcttctacagcccatgttcctctcgagtaatccaa
atccagagtcaggagttctctgatgccaatgataaccatactcaccctcatgacccagcc
accccgacttttgctggttccacaatcaccaccagcacccacatcaccaccacagtgcag
gctttcacccagtgtgatgctgctggacagcacattgtcaccattctgcccccaacatct
cagatctccaccagccctccatctgtggtgctgtcacccccagaccccagaccagctgct
gacccttacggctcccagctattcatgccttccagctccacccgggacctgctagcccaa
gcagaggagcctcgactgggacgcgagtgtgtgcctctgccctttttgcagtggaacctg
ccccgctttgcccgagagaagtatgcaccgcttctgcttaagcccgagacgaagactatg
gtggtggtggtatttgtggcactgctcagccttagcctctatggtaccaccatggtccac
gacggcctttacttgacagatattgtgcccagggacacaaaggagtatgatttcatttcg
gcccagttcaaatacttctctttctacaacatgtacttggtcacaatggatggctttgac
tatgctcactctcaacgtgagctcctgcagcttcacaatgcattcaactcagtcaagtac
attgtgagagacagtaatcaaaaactgccccgcatgtggctccactacttccaggactgg
ctccgaggactccaagctgcatttgatgctgactgggaagcaggcaggatcacctatgac
agttaccgcaatggtactgaggatggagcattagcttacaaactccttatccagactggt
tctaagaaagagccattcaattatagtcagttgacatctcgccgcctggtggataatgat
ggtctgatcccccaagaggtcttctacatctacctgactgtgtgggtcagtaatgatcca
ctaggctatgctgcatcacaggccaatttctatccccaccctcatgagtggacccatgat
aaatatgataccactggagagaacctacgtatcccagctgctgagccgctggagtttgcc
cagttccccttctacctgaatggtcttcggcaggcttcagacttcattgaggccattgag
agtgtgcgctccatctgtgaagaatttatgcgcaagggcatcccaaactaccccaatgga
tacccgttccttttctgggaacagtacattggcctacgccactggttcctgctgtctgtc
agtgtggtgctggcctgtaccttcctggtgtgtgccatcctgctgctcaacccctggaca
gcaggcattattgtttttatcttggctatgatgacagtagagctgtttggcattatgggc
ctgattggtatcaagttgagtgccatccctgtggttatccttattgcctctgttggcatt
ggagtggagttcactgtgcatgttgcactgggcttcctgactgccatcggggacagaaac
acacgctcaggtgtggctctagagcacatgtttgcacctgtgatggatggtgccatctcc
actttacttggagtgcttatgctggctggctctgagtttgacttcatcatgaggtacttt
tttgcagtgctggccattttgacattgttgggaattctaaatggcttggtattgctgcct
gttctgctatcaatcatgggccctccagccgaagtcattcttgccaataatgccagcggt
ctctccagtccctcatccgagcccgtgcccaggattatgaacaaccatggctactatgct
gggcacatccccagagcaccacgacaggccttcactgaggtctcagactctgagtactac
tccgaaacaaccaacacgtctgggattggtgatgaggactacaagcactgtgacagaaat
gcgtacataaccacacctacactgcctccaacttcccacatactgctggaggccagcaag
aacccatcttttccgaagctcacagtggtaaagccttatagtgaaattccatctgcaaca
agcccaaacgatccacccagtgaggcagcccagaatgcagtaaactccatcagttcacag
gtcacacggtgggatggaaagccggagtaccagggatctaggcgagaccctttacccaat
gacagtgcatacactcatgggaggactactcactgtggtcccaggctacagcaaggcaga
gggccacagcagaacaggactaaagctctgccccatggtggaaatacactgcagcagcca
agcaacactgtcaccatggttacggccactgcctcggtaaccgtgtcagtgcaccccaat
ctgccggggtcatatcagggtagcatgcacgaggtctttgaggatagcgtgtcagactct
tttgagaactctaagaggacttcacaaacatacgggagagctaatcagccttccaagaga
gactctttgcaactgcaagatctggaatccctagataacaaccagcatcaagctaaacag
ggtctaggtggtacatggacacaaacagccaaagattgctag
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