Pangasianodon hypophthalmus (striped catfish): 113540281
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Entry
113540281 CDS
T05759
Symbol
myom1
Name
(RefSeq) myomesin-1 isoform X1
KO
K24495
myomesin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113540281 (myom1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113540281 (myom1)
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
113540281 (myom1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
Tissue_fac
Receptor_2B4
Ig_CD22
Ig_J_second
C2-set_2
C2-set_3
Glyco_hydro_39_C
Motif
Other DBs
NCBI-GeneID:
113540281
NCBI-ProteinID:
XP_026792484
LinkDB
All DBs
Position
Unknown
AA seq
1800 aa
AA seq
DB search
MSGSIPFYQRHHRHYDRAYRSREAESTISQYQQSSSTYSAHRTNTKGIRGTTFTSLDETG
VSPQPKRAKSTYLAVDKENQIIGYVVPIFRGSQEFASGLSDTEEARPKESAGYLARRDLF
TSGVEMERVEHKSRRAVMRESAERISLTKRIHDNEEYHKHLNEDNLMRSPEFVIKPRSHT
VWENQCVRLHCTVTGWPEPRIVWYKNNVSIDPMAYPGKYKLVSSYNVHSLEINKCNFDDT
AQYRVSAMNSKGELSAFASVVVKRFKGEVDESLPAPRLYKKWSRSEVPCLEYGVTFETHI
VEKFGVSFGREGETMSLGCSVIIYPSLQRFQPEIEWYRDDKLLVPSKWVQMHWSGERATL
TLSHLNKEDEGLYTLRVITKSGYETHSAYVFVRDSDAEVAGAPGAPLDVYCQEANKDYVI
VTWKQPAVDGGSSILGYFVDRCEVGTSHWIQCNDTPVKFARFPVTGLVEGRSYIFRVRAV
NKCGMSHPSRVSEPVAAMDPADRARKGASAPWTGQIIVTEEEPVEGVVPGKPRDLTVIEA
TKNYVVLSWKPPGDKGYEGVMYYVEKCVSGTDSWQRVNTELPVKSPRFALFDLSEGKSYC
FRVRCCNSAGVGEPSDPTEATQVGDKLDIPSAPGRVIPTRNTDTSVVVSWEASREAKELV
GYYIETSVAGRNAWEPCNNKPVRATRFVCHGLTTGEKYVFRVRAVNAAGISDFSQESEAI
EVKAAIGGGIPHGVFLESGGNTNGLTQHRPGKEGRHVPPCSPATTPLTTLASVSERANST
GPQGPPGALSKGKGGKRSSVTWAPEPSCEFDPQSGTNSDPKMANESCSNLNNKIDSKPGT
NSFTKLGLKPGTNLDTTMGTALGTNSDTKSIDEPGTNSNANTNTSRPMAEQVPRPSADRV
MEPITKPATEVLEKRKSSIDSSSEQERKQENGNGRRGSASPAPPYGISVLESVRDSMVLA
WKQPTFIGGADIIGYFVDYREVINGVPGKWHEANIKSVSERAYRVSDLKENMLYQFQVRA
ANMAGVGIPSLPSQTFKCEEWTIAVPGPPHDLQVLEVRKDSLVLLWKPPVYQGRDEVNGY
YIDIKETDAGFEKWRGVNEKATSKTYIKIKDLKEGVSYVFRVRAQNKAGVGKASEETEPV
LAETKPGTMELVVDVDDEGVISLNFECHNLTGESKFIWSKNYEEMKDTKRMTMETKGNKS
KAIFNCPSEDDLGIYSCAVTHTDGASASYTLTEEGLKELLKISHDHKFPIIPLKSELAVQ
LLEKGRVRFWLQAEKISANGKVEYVFNDNMISQGEKYKMNFDKNTGIIEMFMESLGKEDE
GTYTFQLQDGKATNQSSLVLIGDVFKQLQKESEFQRKEWHRKQGPHFVEYLSYEVTPECI
VRLKCKVGNMKKDSAALWYKDGREIKASEKLDFSEGVLTLDITKISKKDAGVYEVIVKDD
RGQDKSTLNLTDQGFKDLMNQVFSVIANSSTPLKIQSTEEGIRLYTFVSYYNEDLLVTWQ
HKESAIAFTDRIKSGVVGEQLWLQISEPTEKDKGKYAIEFSDGKGGLKRTIELAGQAYDD
AYAEFQRLKAAAIAERNRARVAGGLPDVVTIQEGKALNLTCNISGDPVPEVTWLKNEREM
VSDDHYVLKFESGKFASFTITSVNTTDSGKYSILVKNKYGTESGDFTLEVTENMGDLGVV
SYLTDEHGNVMIGPTACLSKPPTPNESKPATSTPPLPKPASTTPLSLASTSPSEEKPKKK
TTEEKKREKKKVIKRKESVILKLPIGEAESHEPTPTSTPVTPGAETTPLPDPGPEASADA
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atgtctggatcgatcccattctaccagaggcaccatcgtcactatgaccgtgcctaccgt
agccgggaggcggagtctacaatcagccaataccagcagagctccagcacttactctgcc
cacagaaccaacacgaaaggcatcagaggtaccacctttacctctctggatgagacgggg
gtgagtcctcagccaaagagagccaagtccacgtacctggctgtggacaaagagaaccag
attataggctatgtggtgcccatcttcaggggaagtcaggagtttgcgagtggtctgtca
gacactgaagaggctcggcctaaagagagtgctggttacctggcgcgcagagacctcttc
accagtggggtggagatggaacgtgtggaacacaagtctcgcagagccgtcatgagggag
tctgcagaacgcatttccctcaccaagaggatccatgacaacgaagagtaccacaagcac
ctgaacgaggataacctaatgcgttccccggagtttgtgatcaagccccgctcacacact
gtgtgggaaaaccagtgtgtgcggctgcactgcacagttacaggatggcctgagccacgg
attgtgtggtacaagaacaatgttagcattgacccaatggcttatccagggaagtacaaa
ctagtgagcagctacaatgtccactctctggagattaacaaatgtaactttgatgacact
gcccagtatcgtgtgtctgccatgaacagcaagggggagctttcagcttttgcctctgtc
gtggtcaaaagattcaaaggtgaagttgatgagtctctcccagctcccagactctataag
aaatggtcccgctctgaagtgccctgcctggagtatggagtgacttttgaaacacatatt
gtagagaagtttggtgtgtcttttggacgtgagggtgagacgatgagtctgggctgttct
gttatcatctacccatcactgcaacgcttccagcctgagattgagtggtacagagatgat
aagttgcttgtgccatctaagtgggttcagatgcactggagtggagaaagagctactctt
acactttcacacctcaataaagaagacgaggggctttacactcttcgtgtcatcacaaag
tctggctatgagacacactcagcctacgtctttgtccgagattccgatgcagaggttgca
ggagctcctggtgctcctctggatgtgtattgtcaagaagctaataaagattatgtcatt
gttacatggaaacagcctgctgtggatggaggcagctccattctgggctactttgtagac
aggtgtgaagttggcacatctcactggattcaatgcaatgatactccagtcaagtttgcc
cgttttccggttactggtctcgttgaaggccgcagctatattttccgtgtgcgtgcggtg
aataagtgtggcatgagtcatccttctcgagtgtctgaacctgtggcagccatggaccct
gctgaccgtgctcgaaaaggagcctctgcaccttggactggccagatcattgttactgag
gaagagcctgtagagggtgtggttcctggcaaacctcgtgacctcacagttattgaggcc
accaagaactatgtggtgctcagctggaagccgccaggcgacaagggatatgagggtgtc
atgtactacgttgagaagtgtgtgtctggcacagacagctggcaacgtgtgaacacagag
cttccagtgaagtctccacgctttgctttgtttgacctgtctgaggggaaatcttactgc
ttccgtgtccgctgctgcaactctgccggcgtcggtgaaccttcagaccccacagaggcc
actcaagtgggagataaactggatattccgtccgccccaggccgcgtgatccccacccga
aacacagacacatctgtcgttgtgtcatgggaggcatcacgggaagctaaagagctggtg
ggctactacattgagaccagtgttgctggacgcaatgcttgggagccctgcaacaataag
cctgtcagagccaccagatttgtgtgtcatggcttgacaacaggcgaaaagtatgttttc
cgtgtaagggcggttaacgcagccggaatcagtgacttctcacaggagtctgaggccatc
gaagttaaagctgctattgggggcggtattcctcatggtgtgtttctggagtcagggggt
aacacaaatggactaacccagcacaggccaggcaaggagggcaggcatgtgcccccttgc
tcccctgctaccacgccgctaactaccctagctagtgttagcgagagggctaatagtaca
ggccctcaaggtcctccaggtgcactaagtaaaggcaaaggggggaagagaagcagtgta
acctgggctcctgaacccagctgtgagtttgatcctcaatctggtaccaattcagacccc
aaaatggccaatgaatcttgcagtaatttaaacaacaaaatagactctaaacctggcacc
aattcattcaccaaattaggacttaaacctggcaccaatttagacactacaatgggcact
gcacttggaaccaattcagacaccaaatcaattgatgaacctggtaccaattcaaatgct
aacacaaacacttcaaggcccatggctgagcaggttccccgtccctccgctgatagagta
atggaacccataaccaaaccggcaaccgaagtgctggaaaaacgtaagtcctcaatagac
tcttcttcggagcaagagagaaaacaagaaaatggaaatgggcgcagaggttcagcctcc
cctgctccaccctacggcatttccgttttggagagtgtaagggattctatggtgctagcc
tggaagcagccgacattcattggtggtgctgacatcattggatactttgtcgattatcga
gaggtcatcaatggagtacctggaaaatggcacgaggctaacattaagtcagtcagtgag
agagcctacagggtctctgatctgaaggagaacatgctctaccagttccaggttcgtgct
gcaaacatggctggtgttggcatcccatctctgcccagtcagacctttaaatgtgaagag
tggaccattgctgtgccaggtcccccacatgacctccaagtgctggaagtacgtaaagac
tctttggtgttgctctggaaacctccagtgtaccagggtcgtgatgaggtcaatggctat
tacattgacatcaaggagactgatgcaggttttgagaaatggaggggagttaatgagaaa
gctacaagcaagacatacataaagattaaagatctgaaagagggagtgtcatatgttttc
cgtgtacgggctcagaacaaggctggtgtgggaaaagcatctgaagaaacagagccagtg
ttggctgagactaaaccaggcactatggagttggttgtagatgttgatgatgaaggcgtc
atttcactgaactttgaatgtcataatctcactggtgaatccaagttcatctggtccaag
aactatgaggagatgaaagacactaagcgtatgaccatggagaccaagggcaacaagtcc
aaagccatctttaactgtccttctgaggatgacctgggcatctactcctgtgctgttaca
cacactgatggagcctctgccagctacaccttgactgaggagggcctgaaggagctgctg
aagatcagtcatgaccacaaattccccattattcctctgaaatcagagttagctgtgcag
ttgttagagaagggtagggttcgcttctggctccaggctgagaagatttctgctaacggc
aaagttgaatatgttttcaatgacaacatgatctctcagggagagaaatataagatgaac
tttgataaaaatactggtatcattgagatgtttatggagtcactcgggaaagaggatgaa
ggaacgtacactttccaactccaggatggcaaagccaccaaccagtccagcctggtgctg
ataggagatgttttcaaacaactgcagaaagaatctgagttccagaggaaggaatggcac
aggaaacaaggtcctcattttgtggagtatctaagttacgaggtcacacccgagtgcatt
gtgagactgaagtgcaaagtgggtaacatgaagaaggactctgcagcattgtggtataag
gatggaagagagataaaggccagtgagaaactggacttctctgagggagtgctgacgctg
gacattactaagatctctaagaaggatgcgggtgtgtatgaggtgattgtaaaggatgac
agaggccaagacaaatccactcttaacctgactgaccaaggattcaaggatctgatgaac
caagttttcagtgttattgcaaactcttccactccactgaagatccagagcaccgaggag
ggcatccgcctctacacattcgtcagctattataatgaagacctgctcgtcacttggcag
cacaaggagtctgccattgcctttactgatcgaattaagagtggtgtggtgggtgagcag
ttgtggctgcagatcagtgaaccaacagagaaagacaagggcaagtatgccatcgagttc
tctgatgggaaaggaggactgaagaggacaatagagctggctggacaagcatatgatgat
gcttatgcagaattccagagactgaaagctgctgccattgcagaacgaaatcgggctcgt
gtggcaggaggtctgcctgatgtggtaaccatccaggagggcaaggccctgaatctgaca
tgtaatatctcgggagaccccgtgcctgaggtgacctggctgaagaacgagagagagatg
gtgtctgatgatcactatgtcctcaagttcgagtctggcaagtttgccagcttcaccatc
accagcgtgaacacaactgactcaggaaaatacagcatcttggtgaagaacaagtacggc
acagagagcggcgacttcaccttggaagtcacagagaacatgggtgatctgggtgtggtt
tcatacctgactgatgaacacggcaatgtgatgattggacccacagcttgtttatctaag
cctccaacaccaaatgaatcaaaaccagccacatctactcctccacttccaaagcctgct
tccacaacacctctctctctggcatcaactagcccatcagaggagaaacccaagaagaag
acaacagaagagaaaaagagggagaaaaagaaagtgattaagaggaaagagtctgttatt
ctgaaactccctattggagaggcggagtcacatgagcccacccccacatcgacacctgtt
acacctggagcagaaactacgcctctccctgatccagggcctgaggcatcagcagatgca
tga
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