Pangasianodon hypophthalmus (striped catfish): 113540305
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Entry
113540305 CDS
T05759
Symbol
slc1a1
Name
(RefSeq) excitatory amino acid transporter 3
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
113540305 (slc1a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phyp02000
]
113540305 (slc1a1)
Transporters [BR:
phyp02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
113540305 (slc1a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SDF
CENPU
Motif
Other DBs
NCBI-GeneID:
113540305
NCBI-ProteinID:
XP_026792527
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MSMDMLAKKERRGRDVKGMLKRNWVLIATIASVLLGIGLGVLVREYAALSNLDKQYFGFP
GELLMRMLKLVILPLIISSMITGVAALDSEVSGRIGLHAVIYYFSTTIIAVILGIILVTT
IKPGVSQTADNIDRAGSTPNVTTADTLMDLIRNMFPENLVQACFQQYKTQRKEIEPPVSN
TSNMVTTAFPPLTTILTTVAQNLTKDYTIVGTYSDGINVLGIIVFCVAFGLVIGKMGERG
RILLEFFDALNEATMRLVQIIMCYMPVGILFLIAAKIIEVEDWDIFRKMGLYMVTVLSGL
AIHAIIFLPLIYFVFVRKNPFTFALGMAQALLTALMISSSSATLPVTFRCAEENNRIDKR
ITRFVLPVGATINMDGTALYEAVAAIFIAQLNGLDLDVGQIVTISITATVASIGAAGVPN
AGLVTMVIVLTAVGLPATDVTLIVAVDWLIDRFRTMVNVLGDAFGAGIVQKLSKRELERM
DLTSDVDVANPFALETTLDDEECEKKSYVNGGFTVDKSDAISFTETSQF
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgagcatggacatgttggccaagaaggagcggagaggcagggatgtgaaaggcatgctg
aagaggaactgggttctcatagcaaccatcgcctctgtgctactgggaattggactgggt
gtgttagtaagggaatatgctgcactctccaaccttgacaagcaatactttggtttccct
ggagagctcctgatgagaatgctaaagctcgttatcttacccctcataatctccagcatg
ataacaggagtagcagctctggattcagaagtgtcaggccgcattggactccatgcagtc
atctattatttctccaccacgatcatagctgtcatccttggtataatcttggtaacaact
attaaacctggagtctctcagacagcagacaatattgaccgagctggatccactccaaat
gtcaccactgctgacactctgatggatcttatcaggaatatgtttccagagaatctggtg
caggcatgttttcagcagtacaagacccagcgcaaggagatagaaccgcctgtatcaaac
accagtaatatggttacaacagcattcccacctttaaccaccatattgacaactgttgca
cagaacctgactaaagactacactatagtgggtacgtactcagacggcatcaatgttctt
ggcatcattgtgttttgtgttgcgtttggactggtcattggcaaaatgggggaacgggga
cgtatcctgctagagttttttgatgccctgaatgaggctactatgagactggtccaaatc
attatgtgttacatgccagtgggtatcctatttctgattgctgctaagatcattgaggta
gaggactgggatatcttcaggaaaatgggcctatacatggtgactgtgcttagtggactt
gccatccatgccattattttcctacccctgatctacttcgtctttgtaagaaagaatcca
ttcacatttgctctggggatggcacaggctttgttaacagctctaatgatctcctcaagc
tctgcgaccttaccagtcaccttccgatgtgcagaagaaaataataggattgacaagcgg
atcacccggttcgtccttccagtgggtgccaccattaacatggatggtacagcactttat
gaggcagtggcggccatatttattgcccagctaaatggccttgaccttgatgtgggacaa
atagtgacaattagtattacagcaacagtagccagcatcggagcagctggagtccctaat
gctggactggtaaccatggtgatcgtgctgacagcagtgggccttcctgccactgatgtc
actctaattgtggctgttgattggctgattgatcgtttccgcactatggtcaacgtgctg
ggggatgccttcggagctggaatagtccagaagctctcgaagcgagagctggaaaggatg
gaccttacttctgatgtagacgtggccaatccgttcgcccttgagaccactcttgatgat
gaagagtgcgagaagaaatcctatgtcaatggtggcttcactgtggacaagagtgatgcg
atttcttttacagagacctcacagttttag
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