Pangasianodon hypophthalmus (striped catfish): 113540343
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Entry
113540343 CDS
T05759
Name
(RefSeq) LOW QUALITY PROTEIN: putative nuclease HARBI1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113540343
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Gene silencing
Transposable elements
113540343
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DDE_Tnp_4
DDE_Tnp_1
Plant_tran
Acetyltransf_18
Motif
Other DBs
NCBI-GeneID:
113540343
NCBI-ProteinID:
XP_026792587
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MACLFTEDPVDEEAALFRRELHLRRERILRPRVDFLSYPHAFLFEWYRFSRQSIEYIHNL
IHPYIRNISHRGCALTSEQMLCVALRFFANGSFLYNMGDAEHISKATVCRTVRKVCLALK
RFLRIFVMFPGHKPLRVIKEEFHRIAGFPHVVGCIDGTHIPITAPSENEADYVNRKSVHS
INVQVHXLTYCFXWSKITSHAVIITCDAAHIITNVEAKWPGSVHDSQMYRESTLSNRLEC
EEIDGFLLGDRGYPCQPIITPYPEPELGPQQHFNVAHCRTRARVEMTIGLLKARFQCLRH
LRVTPERACDIIAACVVLHNIAIIRGEQHPALQIQDPEEDPIHPADFQDGRVVRDVICRN
FFSD
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggcatgtctttttacagaggatcctgtagatgaggaggctgcattatttcgcagggag
ttacatttacgtcgggagaggattttgaggccccgagtggattttttgtcatatcctcat
gcatttttatttgagtggtaccgtttttctagacagtcaattgaatatatccataatctc
atccatccttacatcagaaacatcagccatcgtggctgtgctcttacatccgagcagatg
ctttgtgttgctttacgtttctttgcaaatggtagttttctgtataacatgggggatgca
gagcacattagtaaggccactgtatgcagaacagtaaggaaagtgtgcctcgctctcaaa
cgctttctgcggatttttgtaatgtttcctgggcacaaacccctgagagtcatcaaagag
gagtttcacaggattgcaggatttccacatgtggttggatgcattgatggcacacacatt
cccatcactgcaccctccgaaaatgaagctgactatgtcaacaggaagtctgtccacagt
attaatgtgcaggtacactgactaacctactgtttctaatggtcaaagataacatcacat
gctgtaatcatcacatgtgatgctgcacatatcatcacaaatgtggaggccaagtggccc
ggctctgttcatgactcacaaatgtatcgtgagtcgaccctgagcaacaggctggaatgt
gaagagattgatggctttcttctgggagataggggttacccatgccaaccaataataacc
ccttacccagaacctgaactaggcccccagcagcacttcaatgtggcacactgcaggacg
agagcccgggtggagatgaccataggcctgttgaaagcacgttttcagtgcctacgtcac
ctcagggtaacccctgagagggcctgcgacattattgcggcatgtgttgttctccataat
attgccataattagaggagagcaacaccctgccctacaaatacaagaccccgaggaagac
cccatccaccctgcagatttccaggatggaagggtagtcagagatgttatatgccgcaat
ttcttctcagattaa
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