Pangasianodon hypophthalmus (striped catfish): 113540432
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Entry
113540432 CDS
T05759
Symbol
snrpf
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113540432 (snrpf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113540432 (snrpf)
03041 Spliceosome [BR:
phyp03041
]
113540432 (snrpf)
03032 DNA replication proteins [BR:
phyp03032
]
113540432 (snrpf)
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
113540432 (snrpf)
Spliceosome [BR:
phyp03041
]
Complex A
U1 snRNP components
Sm proteins
113540432 (snrpf)
U2 snRNP components
113540432 (snrpf)
Complex B
U1 snRNP components
113540432 (snrpf)
U4/U6.U5 tri-snRNP components
113540432 (snrpf)
Complex C
U2 snRNP components
113540432 (snrpf)
DNA replication proteins [BR:
phyp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
113540432 (snrpf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
113540432
NCBI-ProteinID:
XP_026792731
LinkDB
All DBs
Position
Unknown
AA seq
86 aa
AA seq
DB search
MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYVDGALSGHLG
EVLIRCNNVLYIRGVEEEEEDGEMRE
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgccgctgaatccgaagcccttcctgaacggtctgacagggaaaccagtgatg
gtgaagctgaaatgggggatggagtacaagggttacttggtctctgtggacggatacatg
aacatgcagctggctaacacagaggagtatgtggatggagctttgtcgggtcacctcggg
gaggtgttaatcaggtgtaacaatgttttgtatatacgaggagtagaagaagaggaagag
gatggagagatgagagaataa
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integrated database retrieval system
