Pangasianodon hypophthalmus (striped catfish): 113540447
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Entry
113540447 CDS
T05759
Name
(RefSeq) acetylcholine receptor subunit beta-like
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113540447
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113540447
Ion channels [BR:
phyp04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
113540447
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
113540447
NCBI-ProteinID:
XP_026792750
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MEPGMKVLLWVLYSSSMFALTGGSEAERRLLQDLFEDYNLKVRPARAWNETVMVRVGMTL
VQLISLDEKNGEMTTNVFMNMAWSDYRLSWNPKDYDNIDVIRIPPTKVWRPDIYLINNND
GQFDVALYVNVLVNSDGTVSWLPPAIYRSSCSIEVAYFPFDWQNCTMVFRSYTYDASEVD
LQYSLDEDGKEIHEIVIDENAFTENGEWQICHKPSRKNIQEDLYEDITFYLIIERKPLFY
IINIIVPCILTSVLAIFVFYLPPGAGEKMTLSISVLIALTVFMLLLADKVPETSLGIPII
VNYVMFTMILVTFSVILSVVVLNLHHRTPSTHYMPIWVRKVFINFLPPYLGVLRPRPEEP
VQKEEPKEDPPIARADYNLRPGGEYFIRKINPELIAPWRGSHSDNTVQLQRLFDSDSYCL
ILPPDLKSAIAAITYMAEQLKKQDMDDTMTDDWQYIAMVVDRLFLWLFVIITTLGTLAMF
LDASFNHTPEDPFP
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggagccaggaatgaaggttctgctttgggtactttattccagtagcatgttcgctctc
acaggaggttctgaggcagagcggaggctgttgcaggatctatttgaggattataacctg
aaggtgcgtcctgctcgggcctggaacgagacagtgatggtcagagtcgggatgacgcta
gtgcagctcattagtctggatgagaagaatggagagatgacaacgaatgtattcatgaac
atggcatggtctgactacaggttgtcctggaatccaaaggactatgacaatattgatgtt
atccgaatcccccctaccaaagtatggcgtccagacatctacctaatcaacaataacgat
gggcagtttgacgttgctctttatgtgaatgtgctggttaatagcgatggcacagtttcc
tggctgcctccagctatataccgcagctcctgctccattgaggtggcctatttcccgttt
gactggcagaattgcacaatggtgtttcgctcgtatacgtatgatgcctcagaggtggat
ctacagtacagcctggatgaggatggaaaagagattcatgagatagtcatagatgaaaat
gcttttactgagaatggagagtggcagatctgccacaaacccagcaggaagaacatccag
gaggacctctatgaagacatcaccttctacctgatcatcgagaggaaaccacttttctac
atcatcaacatcatcgtgccttgcatccttactagtgtgttggctatattcgttttctat
ctgccaccaggagcaggagagaaaatgactctgtccatctctgtccttattgccctcact
gtcttcatgctcctgcttgctgataaagtccctgagacatctctgggaatcccaattatt
gtgaattatgtgatgtttacgatgatcctggtgaccttctcagtcatcctcagtgttgtg
gtgctaaacctgcaccacaggacccccagcacacattatatgcccatctgggtgcgcaag
gtgttcatcaacttcctgcctccctacctgggtgtactcagaccccgcccagaagaacct
gtacagaaggaggagcctaaagaggaccctcccatagcccgtgctgactacaatctcagg
cccggaggagaatatttcatccgaaagattaatcctgaactgatcgcaccatggagggga
agccactctgataacacggtgcagctgcagagactttttgacagtgacagctactgtctg
atcctgcctcctgatcttaaatcagccattgctgccatcacatacatggctgagcaactg
aaaaaacaagatatggatgatactatgactgatgactggcagtacattgccatggtcgtg
gaccgcctcttcctctggcttttcgttatcatcaccaccttgggcacccttgccatgttt
ctggatgccagcttcaatcacacacctgaggaccctttcccatga
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