Pangasianodon hypophthalmus (striped catfish): 113540560
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Entry
113540560 CDS
T05759
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
113540560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113540560
Enzymes [BR:
phyp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113540560
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113540560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_2
PHD_NSD
zf_RING_Vps8
zf-UDP
zf-RING_Vps41
zf-ANAPC11
PHD
Motif
Other DBs
NCBI-GeneID:
113540560
NCBI-ProteinID:
XP_026792926
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEAVIRGETRGAGSVALGQVDSRLSPYIIDL
HSMHQFRQDTGTLRPVRRSFYDPRSAPGQGWVWEWENDSGTWTPYDTEVGIAIQAARERQ
QPWLDLTPLGFCYLIDLQGMTQINRQTQRRRRIQRRCDLAYPLVSGPLPKPHAWTSNGSA
AHSGMSVSGIGGGNGSAYPSGALPASAITSLGQPCSCQQCMLVLGVKTTSMAQTLGRKSM
PLPRPRSPKTAQRGHSYSLTLPHRNSTTAGGFAHSLSLLDSATAALSISSTRPPPPAVPP
PPPPSSTPHATSPPNQTSSSALISTTATCAPTPSARVLGPVSSAACAAPVPPRASLAGLS
RPALQRIAMAQSRALIASGVPTVPVKNLNGSSPVHPALAGITGILMSAAGLPVCLTRPPK
LVLHPPPVSKSDIKPVPGLGHCCRKTTKKQARKGRTPEEVVRRYLQKVRNPPEEDCTICM
EALAGPSGYKGPGVGGISRAESVGRLSQCGHQYHLQCLVAMYNNGNKDGSLQCPTCKTIY
GVKTGNQPPGKMEYHVIPHSLPGHPDCKTIRIIYNIPPGIQGPEHPNPGKPFTARGFPRH
CYLPDSEKGRLVLKLLLVAWDRRLIFSVGTSSTTGETDTVIWNEVHHKTEFGSNLTGHGY
PDSGHLDNVLEELRAQGITEEDCLRD
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgttgctggcctcggcggtggtggtgtgggaatggctgaacgagcacggccgctggagg
ccctacagcccggctgtgtcgcatcacatcgaggcggtgatccgcggagagactcgcggc
gcaggcagtgtagcgctcggccaggtcgactccagactgtcgccctacatcatcgacctg
cactccatgcaccagttccgccaagacaccggtacattgcgaccagtgcggcggagcttc
tatgacccgcgctcggctccaggtcagggctgggtgtgggagtgggagaacgactcgggc
acatggacgccgtatgacacagaagtgggaattgccatccaggcagcacgcgagcgccag
cagccatggctggacctgacgccgctcggcttctgctatcttatcgatctacagggcatg
acgcagatcaaccggcagacacagcgccggcgccgtatccaaagacgatgtgacttggcc
tacccgctcgtctcaggccctctgcctaagcctcatgcctggacgtccaatgggagtgca
gcacactcgggtatgagcgtgtctgggatcggaggaggaaacggaagcgcgtaccctagt
ggagcccttcctgcttcagcaatcacttctcttggtcagccttgctcatgtcagcagtgc
atgctggtcctgggtgtcaaaaccacaagcatggcgcagactctgggccgaaaatccatg
cccctgcccaggccgaggagcccaaaaactgcccagcggggccactcgtactcactcact
ctgccacacaggaactccacaacagccggagggtttgcacactcactctccttgctggac
tcggccacggctgctctgtctatttcctccacccgtcctcctcctcctgctgttcctccg
cctcctccaccttcctctactcctcatgctacctctccaccaaatcagacatcctccagt
gctctcatctccacaactgccacctgtgccccaaccccttcagcccgggtcttgggccct
gtgtcttcagcagcctgtgccgccccagtgccaccccgtgccagcctggcaggtctcagc
cgtcccgcactgcagaggatcgccatggcacagtcacgggcacttattgcctccggagtc
ccaacagtccctgttaagaacctaaatgggtccagtcctgttcacccagccttggctggc
ataacgggtatcttgatgagtgccgcaggacttcctgtctgcttgacccggccacccaaa
ttggtgctccaccccccacctgtgagcaagagtgacatcaagcctgtgcctggcctcggc
cactgctgccgcaaaaccaccaagaaacaagcccgcaaaggcaggactcctgaggaagtt
gtgagaaggtacctgcagaaggtccgcaaccctccagaggaggactgcactatttgtatg
gaggctctagcaggtccctctggctacaaaggccctggcgtgggcggcatttcccgggca
gagtcggtcggccgtctgtctcagtgtgggcaccagtaccacctgcagtgcctagtggcc
atgtacaacaatggcaacaaagacggcagcctgcagtgccccacctgcaagaccatctat
ggagtgaagactggaaaccaaccaccaggcaagatggagtatcacgttatcccccactca
ctgcccgggcaccccgactgcaaaaccatccggattatctacaacataccccctggcatt
cagggccctgagcacccaaaccctggcaagcccttcacagcacgtggatttcccagacac
tgctacctccctgacagtgagaaaggccgcctagtgttgaagctgttgctggtggcgtgg
gaccgcaggctgatcttctctgtgggaacctccagcacaactggagagaccgacacagtc
atttggaatgaagtccatcacaagacggagtttggctccaacctgacgggccacggctac
cccgactcaggccacctggacaacgttctggaggagctgagggcacaaggtatcactgag
gaagactgtctgagggactga
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