Pangasianodon hypophthalmus (striped catfish): 113540587
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Entry
113540587 CDS
T05759
Symbol
gigyf1
Name
(RefSeq) GRB10-interacting GYF protein 1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113540587 (gigyf1)
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113540587 (gigyf1)
Surveillance factors
Other surveillance factors
113540587 (gigyf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
113540587
NCBI-ProteinID:
XP_026792961
LinkDB
All DBs
Position
Unknown
AA seq
997 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYVKDNKIPEDM
QDKVFAAILQDEPQQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGGGAIPASMARGRGS
VRGGRGRGRGESGFYQRSTEDGEVGFSRSVREIHRSQSWDDRGERRFEKPLRREGLRVGF
EDVGSGGRKEFMRSDSDNWRTLREEHEQEEGGDTGGSWRLAGSRRDDGGPRSAGWREHGE
VRRRKFEFRDGGSEGGRRRAGSEGAEEERDGLPEWCTDEEDGEMGTFDSSGAFMPIKKGS
KDPIPEEEFEFQGLEDEDECGTDGEKKDSNAGDKAERDETDSAAVCEVEVKSLPPSSPSS
MSLIAPQAEPVPAAAPTCLEDPQPAPAMPSKMPSEVLPEPVSELSPSASSSLPSSPPSSS
SAATDLPPSGGDPEDDEGMKHLQQEAEKMVAALQDTSLEEECFTQTLQESRNTAAALPLS
HDSAMKWFYKDPQGEIQGPFSTVEMCEWFQAGYFSMSLLVKRGCDEGFQPLGDVIKMWGR
VPFAPGPSPPPLLCNLDQDRLKKQQELALYQQLQQHQLFQLINRCGEQGMMPSMSRSMSV
PDTGSMWDMHTSASQPTGGEASLWDLTMNSSTQGPTLEQLQKLQERREAELRAKREEEER
KRRDEKRRQQQEEQKRREEEELFRRKQELLMKLLQQAPRQGAAGTGSGWSTGSVPGLGKQ
GKSINTLEIQQDTERLYKQQQRAQQQRWATESLWGSAGMDGKAPGGSSPSGGSMGVWDEA
LKNQSALRSGMGLKNSRSSPSLSDQYMMMNRRKRTEDEERLLKLLQGMKAQDGFTTWCEQ
MLHALNTSANNSNSSLDVATIVAYLKEVESPYEVLDFIRSYLGDTVEAKEFAKQFLERRA
KQKANHQRQQQLSKEVGGLTMNSFPLQDSMRGMNPAALQSMFQAVHSGKGGMGYDQAGKL
KKKQPMMMHSDPSILGYSFHGAGDRMSLSEMEMVEDY
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagagacactcaatttcggcccagaatggctccgtgcactttccagtggaggc
agtgtgacttcccctcctccctctcccgctatgccaaagtacaagctggccgaatatcgt
tacggccgagaggagatgttagcactttatgtcaaagacaacaagatcccagaggacatg
caggataaggtgtttgctgctattctgcaggatgagcctcagcaacctctggcactggtg
cctctcactgaggaagaacagcggaatttttccatgtctgtcaacagtgtggctgtgctg
aggctcatgggtaaagggggtggggccattcctgctagtatggcccgtggcagaggcagt
gtgagaggtggccgaggcagaggccgtggagagagtgggttctaccaaagaagtactgaa
gatggagaggtgggcttcagcaggagcgttagagagatccatcgtagccagagctgggat
gaccggggtgagaggcgctttgagaagcctctgcgtagggaggggttgcgtgttggcttt
gaggatgtgggctctggggggaggaaagagttcatgcgttcagacagtgataactggcgc
acactgcgagaggagcatgagcaggaggagggtggagacacgggaggcagctggagactg
gccggctcacgccgagatgatggtggtccccgttcagcaggctggcgggagcatggtgag
gttcgccgtagaaagtttgaattccgggatggagggagtgagggaggaaggaggagagca
ggaagtgaaggagcagaggaagagagagacggactgccagagtggtgcactgatgaagaa
gatggagagatgggaacctttgactcttctggagcattcatgcccatcaagaagggctct
aaggaccctattccagaagaggagtttgagtttcagggtctagaagatgaggacgagtgt
ggtacagatggagagaagaaagacagcaatgctggagacaaagccgagagagacgagacc
gactctgcagctgtgtgcgaggtagaggtgaaatctctccctccctcctctccttcctcc
atgtccctcattgctcctcaggccgagcccgtgcccgctgctgcccccacttgtctggag
gatcctcagcctgcacctgccatgcccagcaagatgccaagtgaagtgttaccagagcct
gtgtctgagctgagccctagtgcctcctccagtctgccttcatcccctccttcctcttcc
tctgctgctactgacctcccaccatcggggggtgaccccgaggacgacgagggcatgaag
cacctgcagcaggaggcagagaaaatggttgcagctcttcaggacacatctctggaggaa
gagtgtttcactcagacactgcaggagagcagaaacactgcagctgccctgcctctctcc
cacgactctgccatgaagtggttctacaaagacccacagggagagattcagggccccttt
agcacagtggagatgtgtgagtggttccaggcaggctacttcagcatgtctttgctagtg
aagcgcggctgtgatgagggcttccagcctctgggagatgttattaagatgtgggggcgg
gtgccctttgcacctggcccctccccaccgccactgctgtgtaatctggatcaggacaga
ctgaagaagcagcaagagttggctctctaccagcaactgcaacagcatcagctttttcaa
ctcattaacaggtgcggagagcagggtatgatgccttcgatgagcagatcaatgtcagtg
ccagatacagggtccatgtgggacatgcatacctcagcctcacagccgacaggtggtgag
gccagtctatgggacttaacaatgaattcttcaactcagggtccaactcttgaacagctt
cagaagctccaggagagaagagaggctgaactcagggctaagcgggaagaggaagagaga
aaaagaagggatgaaaagaggagacagcagcaggaagaacagaagaggagagaggaggaa
gagctcttcaggcgcaaacaggagctgctgatgaagttgctgcagcaggctccacgtcag
ggggctgccggcacaggctcaggctggagcacaggctcagtgcctggactggggaagcag
ggcaagtccatcaacacgctggagattcaacaggacactgagagactctacaaacagcag
caaagagcccaacagcagagatgggctacagagagtctgtggggttctgctggcatggat
gggaaggcacctggtggcagcagtccctcaggaggcagcatgggggtttgggacgaggcc
ttaaagaaccagagcgccctccgcagcggcatgggcctgaagaacagccgcagtagcccc
tcactcagtgatcagtacatgatgatgaatcgccgcaaacgaactgaggatgaggagcga
ttactgaagctcttgcaggggatgaaggctcaggatggctttaccacatggtgcgagcag
atgctgcatgccctgaacacctctgctaacaactccaactcttccctggatgtggccact
attgtggcatatctaaaggaggtggagtcgccgtacgaggtgctggactttatccgctcc
tatttgggtgacactgtggaagccaaagagtttgccaagcagtttctggagcgccgtgcc
aaacagaaagccaaccatcagaggcagcagcagctctctaaggaggtgggtggactgacc
atgaacagctttcctctgcaggattctatgagaggtatgaaccctgctgctttgcagtcc
atgtttcaggcagtgcattctgggaagggagggatgggctacgaccaggcagggaaactg
aagaagaaacagcccatgatgatgcactcggatcctagcatcttaggttactcattccac
ggtgcaggggatcggatgagcctgagtgagatggagatggtggaggattactga
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integrated database retrieval system
