Pangasianodon hypophthalmus (striped catfish): 113540616
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Entry
113540616 CDS
T05759
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03430
Mismatch repair
phyp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113540616 (mlh1)
03460 Fanconi anemia pathway
113540616 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113540616 (mlh1)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
113540616 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
113540616
NCBI-ProteinID:
XP_026793003
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MAGVIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVIVKEGGLKLIQIQD
NGSGIRALASISHVAHVTITTKTADGKCAYRASYCDGKLKAPAKPCAGNQGTLISVEDLF
YNVQTRRKALKSPSEEYSRIVEVVSRYAVHNSGKSFTVKKQGEMVADVKTFTTASVLDNI
RVVFGVALSRELMEVGCEDQKLAFRLKGYISNANYSVKKCILILFINHRLVESSALKKAI
ETVYTAYLPKNTHPFLYLSLEIAPHNVDVNVHPTKHEVHFLHEDCIIGSIQKHIESKLLG
SNSSRTYFTQTLLPGVSVSVSDVKSSSSSTADPSDRNCPNQMVRTDSKAQKLDAFLQPAN
NISSVPCLIASLPKPIPATANFEAEMSDGPEKFLASAANSMQTDSAHVQSEAPLRKRPHV
DVDEEKENVTLACSPRRRVIRLTSVKELRNEITEQAHKGLQEILHNHSFVGCVNPQWSLV
QHHTKLYLLNNTKLSQELFYQILMYDFGNFGVLWLSNPAPLYDLAILALDSEESGWTEED
GPKEGLAQYIVDFLKKKAEMLEDYFSMKIDEEGNLTALPLLLDNYSPAMEGLPLFILRLA
TEVNWDSEKDCFHDFSKECSYLYSIRKEYTLEPEAGTDLAEAEASWQWKVEHILFKALRS
LIPPKHCSEDGSVLHIANLPDLYKVFERC
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcgtgatccggaggctggatgagaccgttgtgaaccgcattgctgctggagaa
gtcattcaacgacctgctaatgcgattaaagaaatgattgagaactgtctggatgcaaag
tccaccaacattcaggtgattgtcaaagagggaggactgaagctgatccagattcaggat
aatggctctggaattagggcacttgccagcataagccatgtagcccatgttacaattacc
acaaaaacagcagatggaaaatgtgcctaccgagcaagctactgtgatgggaaactgaaa
gccccagcgaaaccttgtgctggaaaccaagggacactgatctcagtagaagacctgttc
tataatgtacaaacccgaaggaaagcccttaaaagccccagtgaagaatactccaggatt
gtggaagtagtaagtagatatgctgttcacaattctgggaaaagctttactgtcaaaaag
caaggagagatggtggctgatgtgaagactttcaccactgcctcagttttggacaacatt
cgggtggtttttggagtagcactaagcagggagttgatggaagtggggtgtgaggatcag
aagcttgctttcagactgaagggttatatctcaaatgccaactactctgtcaagaagtgt
atcctcatcctgttcatcaaccatcgtttagtggaatccagtgccttgaagaaagcaatt
gagaccgtttatacagcatatcttcccaaaaacacacatccttttctttatctcagtttg
gaaattgcacctcataatgttgatgtgaatgtgcatcccacgaagcatgaagtgcacttc
ctccatgaagactgtatcattggaagcattcagaaacacattgagagtaaactacttggc
tccaattcttcccgcacttattttacacagactttacttcctggggtgtcagtatctgtc
agtgatgtaaaaagctcaagcagttcaacagctgaccccagtgatcgtaactgtcccaat
caaatggtgagaactgacagcaaggcccaaaaactagatgcttttctacagccagcaaat
aacatttcttcagttccctgcctcattgcaagtcttccaaaacctatcccagctactgct
aattttgaagcagaaatgagtgatggtcctgagaagttcctggccagtgctgcaaacagc
atgcagactgatagtgcacatgtccagtcagaggctcccctgaggaaacggcctcatgtt
gatgttgacgaggaaaaggagaatgtgacattggcctgcagtccccgtagacgggtcatc
aggttaaccagcgtgaaggagttgcgaaatgaaatcacagaacaagctcataaaggtttg
caggagatactacataatcattcatttgttggatgcgtcaatccccagtggtctctagtc
caacaccacaccaaactgtacctgttaaacaacaccaaactcagtcaggagctgttttac
cagattttgatgtatgattttggtaacttcggtgtcctctggttgtcgaatccagcccct
ctgtatgacttggccatcttggcactggactcggaggaaagtggctggacagaggaggat
gggcctaaagaaggactggcccagtatatagtagatttcttgaagaaaaaagctgaaatg
ttggaagattatttctccatgaagatagatgaggaagggaatctgactgctctaccactt
ctgctagataactatagtcctgcaatggagggtctgccattgttcatcctgcgcttagcc
acagaggtgaactgggacagcgagaaggattgtttccatgacttcagtaaagagtgcagt
tacttgtattccataagaaaagagtacaccctggagccagaggcaggaacagaccttgca
gaggcagaggcgagctggcagtggaaagttgaacacattctcttcaaagcattgcgctct
ctcatcccaccaaaacactgtagtgaagatggcagtgtcctccatatagccaacctgcct
gacctctacaaagtgtttgagagatgctaa
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