Pangasianodon hypophthalmus (striped catfish): 113540650
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Entry
113540650 CDS
T05759
Symbol
rab1a
Name
(RefSeq) ras-related protein Rab-1A
KO
K07874
Ras-related protein Rab-1A
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113540650 (rab1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113540650 (rab1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113540650 (rab1a)
04031 GTP-binding proteins [BR:
phyp04031
]
113540650 (rab1a)
Membrane trafficking [BR:
phyp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab GTPases
113540650 (rab1a)
Autophagy
Other autophagy associated proteins
113540650 (rab1a)
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113540650 (rab1a)
Exosomal proteins of other body fluids (saliva and urine)
113540650 (rab1a)
Exosomal proteins of colorectal cancer cells
113540650 (rab1a)
GTP-binding proteins [BR:
phyp04031
]
Small (monomeric) G-proteins
Rab Family
Rab1/35 [OT]
113540650 (rab1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
MMR_HSR1
Gtr1_RagA
SRPRB
FeoB_N
AAA
ABC_tran
AAA_7
AAA_29
LANC_like
AAA_16
AAA_22
Septin
AAA_5
Dioxygenase_N
CRAL_TRIO_2
TniB
Motif
Other DBs
NCBI-GeneID:
113540650
NCBI-ProteinID:
XP_026793048
LinkDB
All DBs
Position
Unknown
AA seq
202 aa
AA seq
DB search
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG
NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAG
GTEKSNVKIQSTPVKPASGGCC
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgaatatgactatttattcaagctgctcttgattggggactccggtgttgga
aagtcttgtcttctcctccgatttgcagatgacacatacacagaaagctacattagcact
attggtgtggacttcaaaataagaactatagaattagatggaaagaccatcaaacttcaa
atctgggacacagcagggcaggagaggtttcgcacaatcacgtcgagctactatagagga
gcacacggcattattgtagtctacgatgttacagaccaggagtccttcaataatgttaaa
cagtggctacaggaaatagatcgctatgccagtgaaaatgtaaacaagttattggtgggc
aacaagtgtgacttgacaacaaaaaaagtggtggactacacaacagcaaaggaatttgct
gactcccttggaatccctttcctggaaactagtgctaagaacgccaccaatgtggaacag
gccttcatgaccatggctgctgagatcaagaagcgaatgggacctggagcaacagctgga
ggcacggagaagtccaacgtgaagattcagagcactcccgtgaagcctgcgtctgggggc
tgctgctga
DBGET
integrated database retrieval system
