Pangasianodon hypophthalmus (striped catfish): 113540786
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Entry
113540786 CDS
T05759
Name
(RefSeq) excitatory amino acid transporter 2-like
KO
K05613
solute carrier family 1 (glial high affinity glutamate transporter), member 2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
113540786
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phyp02000
]
113540786
Transporters [BR:
phyp02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
113540786
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GFIT
Motif
Pfam:
SDF
BPD_transp_1_N
Peptidase_A4
Motif
Other DBs
NCBI-GeneID:
113540786
NCBI-ProteinID:
XP_026793168
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MEKQVEIRMHECHFEAPAPPPGPACGGLCNKFTKNLLLALTVLGVIVGSLAGVLLRYASP
LHPDVIMIIAFPGDILMRMLKMVILPLIISSLITGLAGLDAKSSSRLGTRAMVYYMSTTI
IAAVLGVLLVLVIHPGHPKLRSNLGEGKKNDDVSTLDAFFDLIRNLFPENLVQACFQQIQ
TVTNKVEVATPHHPHRFGRNTTKWAAKYAMKKSLQFKTGMNVLGLIGFFVAFGICMGKMG
EKAKLMMDFFSVLNEIVMRLVGMIMWYSPVGIACLICGKIISINDLEVVAKQLGMYMLTV
IVGLIIHGGIFLPLIYFVIVRKNPFTFFMGVFQAWVTALGTASSAGTLPVTFRCLEQNLG
IDKRVTRFVLPVGATINMDGTALYEAVAAIFIAQMNGIKLGPGQIVTVSLTATLASVGAA
SIPSAGLVTMLLILTAVGLPTQDISLLVAVDWLLDRFRTSVNVIGDSYGAGIVYHLTKDE
LNMLDAQQMRTDDFEMTKPQSFYENNTNHGVYASYNSCPQVLIDDCKINLTPNGSPAVFS
VIEEEPWTQE
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcaagttgagattcgaatgcatgagtgtcactttgaagctccagctcctcct
ccagggccagcatgtggaggtctctgtaacaaattcacaaagaacttgcttctagcactc
acagttcttggtgtgattgtaggctcattggctggtgtccttctgcgttacgcgtctcca
cttcacccagatgttatcatgatcatcgctttccctggtgatattctcatgagaatgttg
aagatggtgattttgcctctgatcatctccagtttaatcacgggtctggcgggtttagat
gccaaatctagcagtcgtctcggcaccagagccatggtgtattacatgtccacaaccatc
attgctgcagtgctgggggtgcttctggtgctggttatccacccgggccaccccaaacta
agatccaacttgggagagggcaagaagaacgatgatgtgtccactttagatgcctttttt
gacctcatcagaaatctctttccagagaatctggtacaggcttgctttcagcagatccag
actgttacaaataaggtagaggtagcaacacctcatcatccccatcggtttggacgaaat
accaccaagtgggcagcaaaatatgctatgaagaaatctcttcaattcaagaccggcatg
aatgtgttagggctcattggtttttttgtggcttttggaatctgcatgggaaagatggga
gagaaagccaagctgatgatggacttcttcagcgttctcaatgaaattgtcatgagactt
gttggcatgattatgtggtattctcctgtgggcattgcatgccttatctgtggcaagatt
atttccattaatgacctggaggtggtggccaagcaactggggatgtacatgctcacagtc
attgtgggccttatcatccatggtggcatattcctcccactgatatattttgtcattgtt
agaaaaaacccttttacattttttatgggagtatttcaagcttgggtgactgcattagga
acagcctccagtgctggtacactgcctgttacgtttcgttgcctggagcaaaacttgggc
attgataaaagggttactcgatttgtgcttcctgttggtgcgacaatcaacatggacggg
acagcactttacgaggcagtggcagccattttcattgcacagatgaatggaataaaactt
ggtcctggtcagattgttacagtcagcctgacagctactcttgctagtgtgggagctgcc
agtattcccagcgctggcctcgtcaccatgctgctcatcctcactgctgtgggtctgcca
acccaagacatcagcttactggtcgccgtcgactggcttctggatcgcttccgaacatcg
gtcaatgttattggagactcttatggagcgggcatcgtgtaccacctcaccaaagacgag
ctcaacatgcttgatgcccagcagatgagaacagatgactttgagatgaccaaaccacaa
tccttctatgagaataacacaaaccatggtgtatatgcatcgtataactcctgtccacaa
gtgctaatagatgactgcaagatcaacttgaccccaaatggctcccctgctgtcttttcc
gtcattgaggaggaaccttggacacaagagtaa
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