Pangasianodon hypophthalmus (striped catfish): 113540797
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Entry
113540797 CDS
T05759
Name
(RefSeq) tumor susceptibility gene 101 protein-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03250
Viral life cycle - HIV-1
phyp03272
Virion - Hepatitis viruses
phyp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113540797
03272 Virion - Hepatitis viruses
113540797
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113540797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113540797
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113540797
Membrane trafficking [BR:
phyp04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
113540797
Exosome [BR:
phyp04147
]
Exosomal proteins
Proteins found in most exosomes
113540797
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UEV
Vps23_core
HAUS1
DUF3450
UQ_con
ANG-1
Laminin_II
Exonuc_VII_L
TPR_IF140_C
FlaC_arch
DUF724
DUF5685
Prominin
CCDC90-like
APG6_N
Spc7
Fzo_mitofusin
Nsp1_C
Motif
Other DBs
NCBI-GeneID:
113540797
NCBI-ProteinID:
XP_026793184
LinkDB
All DBs
Position
Unknown
AA seq
389 aa
AA seq
DB search
MAVNENALRKMIFKSYKYRDLTTREVTNVINQYKDLKPVMDTYVFNDGSNRELLSLTGTV
PVSFKGNVYNIPICLWLLDTYPYNPPICFVKPTSSMMIKTGKHVDANGKIYLPYLHEWKH
PESDLFGLIQVMIVVFGEEPPVFARPTTQTAYAGFQPAGPPNASYLPNTPSTPFGQSYSP
NPGGFQGYPYPAATSGYPATSGTPHYTPTTAGGPSRDATIGEDTIRASLVSAVSDKLRWR
MKEEMDRSQAELDALKRTEEDLKKGHQKLEEMVSKLDQEIADVDRNVELLKKKDEELTAA
LDKMEQQSENNDIDELIVPTAPLYRQILNLYAEENAIEDTIFYLGEALRRDVIDLDVFLK
HVRLLSRKQFQLRALMQKARKTAGLSDLY
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaaacgaaaatgctctgcggaaaatgatatttaagagttataaatacagagac
ctgaccaccagggaagtcactaatgtcataaatcagtacaaggacctgaagcctgtgatg
gacacgtatgtgttcaacgatggcagcaaccgagagttactgagtcttacaggaactgta
ccagtgagctttaaaggaaatgtctacaacattcctatttgcctgtggctgctagacacc
tatccatacaatcctcccatctgctttgtcaagcccactagttccatgatgatcaaaaca
gggaagcacgttgatgccaatggaaaaatctacctcccatatttgcatgaatggaagcat
cctgagtcagatttgtttgggctgatccaggtgatgattgtggtttttggagaagagcca
ccagtttttgcccggcccaccacacagacagcttatgcaggatttcaacctgctggtcca
cctaatgcttcctacttgccaaacacaccgagcactccatttggccagagttactctcct
aacccaggaggttttcagggttatccgtaccctgctgctacttctggatacccagccaca
tctggaacaccacactatactcccaccactgctggaggccccagccgtgatgccaccatt
ggcgaggacacgatccgtgcatctctggtgtctgcagtgagtgataagctgcgctggcgg
atgaaggaggagatggaccgttctcaggctgaactggatgctctcaagaggactgaggag
gacctgaaaaagggacaccagaagctggaggagatggtgtccaaactggaccaagagata
gctgatgtggacagaaacgtagagctgctgaagaagaaggatgaggagctcacagccgct
ctggacaagatggaacagcagtcagagaataacgatattgatgaactcatcgtgcctact
gctccgctgtaccgccaaattctgaacctgtacgctgaggagaacgccatcgaagacact
atcttctacctgggtgaggcactacgcagagacgtcatcgatttagacgtcttcctcaag
catgtgaggcttctctcacggaaacagttccagttgcgcgctttgatgcagaaagccaga
aaaactgcaggcctcagcgacctctactga
DBGET
integrated database retrieval system
