Pangasianodon hypophthalmus (striped catfish): 113540813
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Entry
113540813 CDS
T05759
Symbol
irx3
Name
(RefSeq) iroquois-class homeodomain protein IRX-3
KO
K24889
iroquois-class homeodomain protein IRX
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113540813 (irx3)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
113540813 (irx3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
113540813
NCBI-ProteinID:
XP_026793212
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MSFPQLGYQYIRPIYPQERQGIGSARSGSELSPSGTLSNVLSTMYGSPFTAAHTYGAFLP
YSNDLSIFSQLGAQYELKDSPGVQHPAFAHPHPAFYPYGQYQFGDPSRPKNATRESTSTL
KAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNRTDED
GNVYGSDHEGEDGDKREDEEEIDLENIDTEHIESKDELDEQDELHSDSKLDASCDSEISD
GYEDLHGPEPKLLKAVAQEGKDAHADADAERPDHFHHHHHHLHHHHHHHLPHSLDLKTQP
PSSEQIKLNPVSNSPPAENNAAPVQKPKIWSLAETATSPDNPRKSPLVNGSSSQAVLPPH
RLVSCPVGKLQNWTSRAFSAHQLALLNSNHYLGLANQASANGLALYTGNRHTEERSVSSE
TAHTGTSHPPH
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccacagttgggataccagtacatccgaccgatatacccgcaagaacggcaa
gggatcggcagcgcgcgcagcgggagcgagctcagtccgtccggcacgctctccaacgtt
ctctccaccatgtacggatcacctttcaccgccgcacacacctacggagcgtttcttcct
tattcaaacgacctgtccattttcagtcagttgggagctcagtatgagctaaaagacagt
cctggtgtccagcacccagcgtttgcccatcctcaccctgccttctacccctacggccag
taccagttcggagacccgtccagacccaaaaatgccaccagggagagcacaagcacgctg
aaggcctggctcagcgagcaccgcaagaacccgtatcccaccaagggcgagaagatcatg
ctggccatcatcaccaagatgaccctcacccaggtgtccacctggttcgccaacgcccgg
aggagactgaagaaggagaacaagatgacctgggcgccgcgcaaccgcacggacgaagac
ggcaacgtgtacggcagcgaccacgaaggcgaggatggcgacaagcgcgaggacgaggaa
gagatcgacttggagaacatcgacacggagcacatcgagagcaaggacgagctggacgag
caggacgagctccactcggactccaagctggacgccagctgcgactcggaaatctcagac
ggctatgaggatttacacgggcccgagccgaagcttttaaaagccgtggcccaggagggc
aaagacgcgcacgcggatgcagacgctgagcggcccgatcacttccatcaccaccatcac
cacctccatcaccaccatcaccatcaccttcctcattcattagacctcaaaacgcagcct
cccagcagcgagcagatcaaactcaacccggtgtccaactcgcctccggctgagaacaac
gcagccccggtgcaaaaacctaagatctggtctttggctgagacagccacgagcccggac
aatccccggaaatctccactcgtgaacgggagctcgtcccaggcggtcctgcctcctcac
agactcgtttcatgcccggtgggcaaactgcagaactggaccagccgtgcgttctcggcg
caccagctcgcgctgctcaactcaaaccactatttaggactggccaatcaggcttcagcc
aacggcctcgcgctctacaccggcaacaggcacacggaagagcgcagtgtcagctcagag
actgcacacacaggtacatcacatccccctcactga
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