Pangasianodon hypophthalmus (striped catfish): 113540843
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Entry
113540843 CDS
T05759
Symbol
cyld
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04217
Necroptosis
phyp04622
RIG-I-like receptor signaling pathway
phyp04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
113540843 (cyld)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
113540843 (cyld)
04625 C-type lectin receptor signaling pathway
113540843 (cyld)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phyp01002
]
113540843 (cyld)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113540843 (cyld)
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113540843 (cyld)
Peptidases and inhibitors [BR:
phyp01002
]
Cysteine peptidases
Family C67
113540843 (cyld)
Ubiquitin system [BR:
phyp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113540843 (cyld)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
113540843
NCBI-ProteinID:
XP_026793257
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MSSALWNQEKGAGSPRDDWRFFMLLKECVVEKAAQKVVRVPRGSLGQVCPERTSLGRPLP
PTKGKRSLRILDQSNVVASVDERDALELDEALAELLFPITNCEERYGLLCDTARLQRARS
IRCGSRVRVQLRSGDPPLPGVVRFKGALLPDRALSGIWFGVELLEEGRGQGFTEGSYQGQ
QLFRCEDECGVFVALDKLELWEDEELEVDHLSLVDNEPDVEGDFLPLELNSRVMVQTHEG
PERGTVIFCDLLPGNETLGYYVGVDMDNPIGDWDGVIDGKLLCNFASLEHTRLVPICDVM
PEYSMQDPRLSKASFEKSGSQSKPKSKGLGLQAASRSKSEFYYTLNGSSVDHPTQSKSKS
TWYIDEVGEDPAKSLTETPPDFNQASPPPRAPPTAPSLSSDNKFHSLPFSLSRKSGPNGS
MSHGPLSLSVQSVMGEQQEAPPPPTAPSPRPPSPPKGQPGLEVGSLVEVKENPPLCGVIR
WVGLPAGLLEPLAGLELEEECVGCTDGTFKGTRYFTCPPKKALFVKLKCCRPDSRFPSQH
HSPNPIERCNSIECSVPRSLLCSGTCFSTFTAFQQFLYAFFSFSSCVLLDLNLSSPLLSS
PLHSSPLLSLFSFSSVLDTVLLRPKSKTDVEYYLETQELLRTEIVNPLRIHGYVCATKIM
KLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYFYQIFMD
KKDKVLVPTSQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMYNKIFPSLELDITDL
LEDTPRECRICGGLALYECRECYEDSDITAGKIKQFCEKCNTQVHLHPRRKSHRYSKLSL
PKELQEGTWRQASFPRQQMELFAVLCIETSHYVAFVKYGSAPSSWLFFDSMADRDGGQNG
FNIPQVSPCPEVGAYLKMTPEELHALDPKNIQGYARRLLCDAYMCMYQSPTMSLYK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggcgctgtggaatcaggagaagggggcgggcagcccgcgggacgactggcgc
ttcttcatgctgctgaaggagtgcgtggtggagaaggcggcgcagaaggtggtgcgtgtg
ccgcgtggcagcctgggtcaagtctgccccgagcgcacctccctgggccgcccgctgccc
cccaccaagggcaagcgcagcctgcgaattctggatcagagcaacgtggtggcgagcgta
gacgagcgcgatgccctggagctggacgaggctctggccgagctgctcttccccatcacc
aactgcgaggagcgctacgggctgctgtgtgacacggcgcgtctccagcgggctcgctct
atccgctgcggctccagggtgcgagtgcagctgcgctccggcgacccgccgttacccggc
gtcgtcagattcaaaggagctctgctgcctgaccgcgctctgtcgggaatctggttcggc
gtcgagctgctggaggagggtcgtggtcagggttttactgagggctcgtatcagggccag
cagctgttccgctgtgaggacgagtgcggtgtatttgttgctcttgataaactggagctc
tgggaggacgaggagctggaggtggatcacctgagcctggtggacaatgaaccggatgtg
gaaggagatttcctgcctctggagctcaactctcgtgtcatggtgcaaacacacgagggc
cctgagcgcgggacagtcatcttctgcgaccttttacctggcaacgagacccttggctat
tacgtcggtgtcgatatggacaatcccatcggagactgggacggcgtgatcgacgggaaa
ctgctgtgtaatttcgccagcctcgagcacacccgtctcgtgcccatctgtgatgtcatg
ccagagtactccatgcaggacccgaggctgtcgaaagccagctttgagaagtctggaagt
cagagcaaaccaaagagcaaagggttaggtctgcaggctgccagcagaagcaagtctgag
ttttattatacgctaaatggcagctctgtcgatcatccgacccagtccaaatccaaaagc
acgtggtacatagacgaagtgggcgaagacccagccaagtccctgacggaaacgcccccc
gacttcaaccaggcctcgccgcctccccgagccccgcccaccgccccctcactgtccagt
gacaacaagttccactcgctgcccttcagcctgagtcgcaagagcggccccaatgggagc
atgagccatgggccactctcactgtccgtccagtcggtgatgggagaacagcaggaggct
ccgcccccaccgacagctccctctccgaggccaccgtcaccccctaaaggtcagccgggg
ttagaggtcgggtcactggtagaggtgaaggagaatccgcccctgtgtggggtgatacgc
tgggtgggcctgccggctggactactggagcctcttgcagggctggagctggaagaggag
tgtgtaggatgcactgacggtacttttaaaggcacacgctactttacctgtcctccaaag
aaagctttgtttgtgaaactgaaatgctgccgaccagattctcgcttcccttcgcaacac
cactcacccaatccaattgaacgctgcaattctatagaatgttcagtaccgcgttcgctg
ctgtgctcaggaacgtgcttcagtacctttactgcatttcagcagtttctctacgcattt
ttttcgttcagcagctgcgtgttgcttgacctcaacctctcctctcctctcctctcttct
cctctacactcctctcctctcctcagtctgttttcgtttagctcagtgttggacacggtg
ttactgaggccgaagtctaagactgatgtagaatactacctggagacacaggagctgtta
cgcactgagatagtcaacccactgcggattcatggttatgtctgcgcaactaagatcatg
aagttgcggagaattctagaaaaggtggaggctgcgtcaggattcacgtcagaggagaaa
gatcctgaagagtttctcaacatcctgtttcaccacatcctgagggtcgaccctctgctt
aagctacgctctgctggccagaaagttcaggactgttacttctaccagatcttcatggat
aagaaggataaagtactcgtgccgactagccagcaactgctggagtggtccttcatcaac
agtgacctcaagtttgctgaggctccctcttgtctcatcatccagatgcctcgctttggg
aaggactttaagatgtataataagattttcccgtctctggagctggacatcacggatctt
ctggaagacacacccagagagtgccgtatctgtggtggtttagctctttatgagtgcagg
gagtgttatgaagattctgacatcacagcaggaaagattaagcagttctgtgaaaagtgc
aatacacaggtgcatctgcacccacggcgtaagagtcatcgctacagtaagctctcgtta
cccaaagagctgcaggagggcacgtggagacaggcttcgttcccccgccagcagatggag
ctgttcgccgtgctctgcatcgagaccagccactatgtggccttcgttaagtacggctca
gccccgtcctcctggctcttcttcgacagcatggccgaccgagacggtgggcagaatggt
tttaacatcccgcaggtgtctccgtgtcctgaagtgggagcgtacctgaaaatgacccct
gaagagctccacgccctcgaccctaaaaacatccagggctacgcgcgccgcctgctctgc
gatgcttacatgtgcatgtaccagagccctaccatgagcctgtataaataa
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