Pangasianodon hypophthalmus (striped catfish): 113540849
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Entry
113540849 CDS
T05759
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113540849 (apex2)
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
113540849 (apex2)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
113540849 (apex2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
113540849
NCBI-ProteinID:
XP_026793302
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MKIVTWNINGIRTFKNGIKSALDSFDADIICLQETKVTRDLLDERTAIVDGYNSYFSFSR
GRTGYSGVATFCKDSVTPFAAEEGLTGRLVNHREAVGCYGDQGEFSIEELQSLDNEGRAV
ITQHKFKHSVEAEGFETLTIINVYCPRADPEKPERKLFKLQFYKLLQSRAEALVGPGSHV
IILGDINTSHRPIDHCDPDDVENFEDNPGRKWLNSFLFSPAENGNHEEEGSEPSQNCVSG
RHFIDTFRHFHPTRTNAFTCWSTRTGARQTNYGTRIDYIFANHSLVETNLLNADIMPEVE
GSDHCPIWAKLSCTFVPSPKCPALCTCYMPEFMGKQQKLLRFLVKVSEQHTDCRDIEKPL
PGSQEVGEIRENLNPLAAGISTGSKRPADELPESSTFKGKKSKNAKKVTKPQGSLLTFFK
PKLTPVVSSSQSLSSGENTETSLKSEAVISEIHKGTENDVNSRTATHSMLTECHSEAKVK
GETSKFRVTKTKEEEEGCQAQIQSNTTPNQETKKGSCPDFWKSVLHGPPQPPLCNAHNEP
CVLRTVKKPGPNLGRQFFVCARPQGHTSNPQARCNFFVWVDKRK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtcacttggaacataaatggcataagaacttttaaaaacgggataaagtcg
gcgcttgactcgttcgacgctgatatcatatgcttgcaggaaaccaaagtgacgcgcgac
ctgctggacgaaaggactgcaattgtggatggatacaactcttacttcagctttagccga
ggacgcactggctactcgggggtcgcgacgttttgtaaagactccgtcaccccattcgct
gcagaagaaggactgacaggtcgccttgtcaaccatcgagaggctgtcggttgctatggt
gatcagggggaattctctatagaggagctccagtcacttgataatgaaggaagagccgta
atcacccaacacaagttcaagcattcagtggaagcagaaggatttgagacactgactatc
atcaatgtgtattgcccgcgtgcagatccagaaaagccagagagaaagctgtttaaactg
cagttttacaaactcctgcagagcagagctgaggcacttgtggggcctggaagtcatgtg
atcattttgggcgatataaacacctctcaccggcccatagaccactgtgacccagatgat
gtggagaactttgaggacaatccaggcagaaagtggttgaacagcttcctgtttagtccg
gcagaaaacgggaatcatgaagaggaaggttctgagccctcccagaattgtgtgtctggt
cgtcattttattgacaccttccgccatttccatcctacacgtaccaacgccttcacatgc
tggtctacacgtacgggcgctaggcaaaccaactatggcacccgcatcgactatatcttt
gccaatcattcactagttgagacaaacttactgaatgcagatatcatgccagaagtggag
ggttctgatcactgtcccatatgggctaagctaagctgtacttttgtaccaagtcctaag
tgcccagctctgtgcacctgttatatgcctgagttcatggggaagcagcagaaactcttg
cgctttcttgttaaggtttctgagcaacacacagattgcagagacattgaaaaacctttg
cctggatctcaagaggttggggagattcgtgagaacctcaatcctctagcagcaggtatc
agtactgggagcaagagacctgcagatgaactaccagagtcatctacatttaaggggaaa
aaaagcaaaaatgctaaaaaggtaactaaacctcagggcagtcttctgaccttctttaaa
cctaaactgacccctgtggtatcttcaagccagagcctaagctcaggtgagaacactgag
acaagtttgaagagtgaggccgttatatccgagatccacaagggtacagaaaatgatgtc
aacagccgcactgcaacccacagcatgcttacagagtgccactctgaggcaaaagtgaag
ggtgaaacaagtaagttcagggtcaccaagactaaggaagaagaagagggttgtcaggct
cagatccagagcaacaccacacccaatcaggagaccaagaaagggtcttgcccagacttt
tggaaatcagttttgcacggaccaccccagccgccactgtgtaatgcacacaacgagccg
tgtgtgctgcggactgtgaaaaaacctggaccgaatttgggccggcagttttttgtatgt
gcccgtcctcagggtcacacgtccaatccacaggcaaggtgtaatttctttgtctgggtg
gacaaacgcaagtag
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