Pangasianodon hypophthalmus (striped catfish): 113540870
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Entry
113540870 CDS
T05759
Symbol
cdh5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04514
Cell adhesion molecules
phyp04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113540870 (cdh5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
113540870 (cdh5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phyp04515
]
113540870 (cdh5)
04090 CD molecules [BR:
phyp04090
]
113540870 (cdh5)
Cell adhesion molecules [BR:
phyp04515
]
Cadherins
Major cadherins
113540870 (cdh5)
CD molecules [BR:
phyp04090
]
Proteins
113540870 (cdh5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_4
BppU_N
FctA
MACPF_D2
Motif
Other DBs
NCBI-GeneID:
113540870
NCBI-ProteinID:
XP_026793299
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MMIRSVGKRAVRTFLWTAFLHFIFTGAEHDEDVSKSSVLQREKREWQWNMLLVYEEKQPQ
NPPEKIGRLKNTFFNKNAAFRLSGDGAGDTFSLNEFGEVLVLKKLDRETISSYTLKAQII
DSTNGRKLEEDTEFTIQVQDINDHTPVFSGPYTGFVNERAERGTVVMKVRATDKDDPSTP
NGIVTYKLLNGTSFFRISDKTGEIFTTVDTLDRETQSEYTLMVQASDMPGLEGGRSASTV
VTISIHDINDNVAMFSKQSYHFVVKEDVPVGFKIGTLDIKDRDEKQNKKPIFTVDHSHKD
IFDLELNENNDGVLTLKKGLDYEMKKRYTFTVTVKENVAQPPDNTNPRTSAQIDITVEDV
DEPPVFTKAEYTFNVTEGQKNIIVGSVSAKDPDKDSYRIRYSIKDPSSPVNINSETGQLT
LKTALDRETYDVHVFHVTAEEESTRKLDSYAMVRINVLDINDNDPDLAEGSDVYICEKDE
SGTVIGVIGAIDKDENPGKFRFSLAGKSSNFSLYDNLNNTASVILTHGGFSTQRSVENIL
EIEITDGGTPPRKSIRPVHVRVCACRSERQIEYCAAYSKSGVSVSAVIAILLCILTILVI
VILFVLRKRYQKEVILGKPFREIHEQLVAYDEEGGGEMDTNIYDVSILTSARSDARLGPD
PAPPAMYSVVKKPSACKGDMAVMIEVKKDEADHDRDGIPYDTLHIYGYEGTESLAGSLSS
LESSSSFGSELDYDFLNDWGPRFRTLAQIYGSEVNTSY
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgatgatacgctctgttgggaagcgtgcagtcaggacttttctctggacagcgtttcta
cactttattttcaccggagctgaacatgatgaagatgtgtcaaagtcgtccgtcctgcag
agagagaaacgcgagtggcagtggaacatgttgctagtgtacgaggaaaaacagcctcag
aatccaccggagaaaatcggcaggctgaagaacactttcttcaacaagaacgcggcgttc
cgtctctcgggagacggagcaggagacaccttcagcctgaacgagttcggagaggtgctc
gtgttgaagaagctggatcgggaaactatcagcagctacacactaaaagcacaaatcata
gactctacgaatggaaggaagcttgaggaggacaccgagttcaccatacaggtccaggac
attaacgatcacacacccgtgttctcagggccttacaccgggtttgttaatgaacgagca
gaaagaggaactgtggtgatgaaggtgcgtgcgactgataaagacgacccgagcactccc
aacggcatcgtcacctacaaactgctgaacggaaccagcttcttcaggatttcagataaa
acgggtgaaattttcaccactgttgacacactggaccgtgagactcagagtgagtatacg
ctgatggtgcaggcgtcggacatgcccggattagagggaggacgatcagcgagcactgtg
gtgaccatcagcatacacgacattaatgacaacgtggccatgttctctaaacaaagctac
cactttgttgtgaaggaggatgtgccagtagggttcaagatcggaacgctggacattaaa
gaccgcgacgagaaacagaataaaaaacccatttttactgtagaccattctcataaagac
atctttgatctggagctaaacgaaaataatgatggagttctcacactgaagaagggactc
gactatgagatgaagaagaggtacacttttaccgtgacagttaaagagaatgtcgcccaa
cctccggacaatacaaaccccaggacgagtgcacagatcgacatcaccgttgaagatgtg
gacgagccgccggtcttcaccaaggcagaatacacatttaatgttactgaaggtcagaaa
aatataatcgtgggatcggtttcggcaaaggacccagacaaggacagctacaggatacgg
tacagcataaaggatccttccagtccggtgaacattaacagtgagaccggacagctcact
ctgaagaccgcactggaccgggaaacctatgatgtacacgtgttccatgtcacagcagag
gaagaatctacaaggaagctggactcttatgcgatggtcagaataaacgtcctggacatc
aacgacaacgacccagacctggccgaagggagcgacgtgtacatctgcgagaaggatgag
agcggaacggttatcggtgttattggtgccatcgacaaggatgagaatcctgggaaattt
cgtttctctctcgcaggaaagagttcaaacttctccctttatgacaatctgaataacacg
gccagcgtcattctaactcacggaggtttcagcactcagagatctgtggagaacattctg
gaaatcgagattacagatggaggaactccgccaaggaaaagcatcagacctgttcacgtg
cgagtgtgtgcgtgtaggagcgagagacaaatcgagtactgcgcagcctacagcaagtcg
ggcgtcagtgtgagcgccgtcatcgccatcctgctctgcatcctcaccatcctcgtgatt
gtgattctcttcgtgctgcgtaaacgctatcagaaggaagtcattctcggaaaaccattc
cgtgagattcacgagcagcttgtggcgtatgatgaggaaggaggaggagaaatggacacg
aacatatacgacgtctccatcctgacctcggctcgctcagacgcccggctcggtcccgat
ccagctcctccagccatgtactccgtagtgaagaagccttcagcctgtaaaggggacatg
gccgtgatgatcgaggtgaaaaaggacgaggccgatcacgaccgggacggaattccctac
gacacgctgcacatttacggctacgaggggaccgagtccctcgccggctcgctgagttca
ctcgaatcgtcttcttccttcggatccgagctcgattacgactttctgaacgactggggg
ccgcgattcaggacactcgctcaaatttacggctctgaagtgaatacttcgtactga
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