Pangasianodon hypophthalmus (striped catfish): 113540894
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Entry
113540894 CDS
T05759
Symbol
cilp
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113540894 (cilp)
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
113540894 (cilp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
I-set
Ig_2
CarbopepD_reg_2
CarboxypepD_reg
ig
TSP_1
V-set
Motif
Other DBs
NCBI-GeneID:
113540894
NCBI-ProteinID:
XP_026793355
LinkDB
All DBs
Position
Unknown
AA seq
1161 aa
AA seq
DB search
MAYRLTWVFLLLLFGISITFTRGSMKHNPAVFHTDDDYEWTTWFNVDHPGGKGDYEQLDA
IRFYYRARVCDSPRALEARTTDWIPARGTGERVHAEPTVGFWCINSEQPEGKNCSNYAVR
FLCPRDTKPDTQGVWGQWSEWTPCPAQCGHVAAQIRSRTCTTQSRQCNGLKMESRQCKGP
TCPGCSLQCVMGKANTDCNACMCEDHIVLGSVRRAGSLPAPGAAILLLGTSPKLLTLSDH
NGHFRVPGICPDGNTTLLINLQGHMPQQIVMPLSSEPTTVLHVKLERARNLYVQKNPETK
ARRMGQTAAFCCKVTGSPEPDEYQWFHNGTLLEKSVYHYDETLVLRNLRMDQAGEYYCRA
SSENGAIKSKPATLSVIGQAEPSCSPNPEPHMIRLPHDCFQNHTNSFYYDVGRCPTETCT
GQLDNGIRCKDSISFCCGVSKMEERQITCQGYQLPTMVVTQCGCKKCVETKTIVRGRATA
ADTGEPLRFGHIYMDGETISRTGYKGTFSIQVPTDTERLVLTFVDNMQKFVNTTKVLLFN
NKGGAVYHEIKMLRKKPPVTLSSTDTNKLQLGEIQGEEPMAEIEIPPNSFYRQNGEVFVG
NVKASVTFMDPRDVSTAAAAQSDLNFVGTEGDTLPLRTYGMFSVDFRDEVDGESLNAGKV
KVRLDAAQVKMPEHLKSMKLWSLNPETGLWEEEGQLHMEKKQRRKREERTFLIGNMEIRE
RRLFNLDVPENRRCYIKVRAFRSERFMPSEQVEGVVITLINMEPTAGYSTNPRAWGRFDS
VITGPSGACLPAFCDDQRADAYSAYVMANLGGEELEAVASAPKLNPNIIGVPQPYLNKLN
YRRTDHDDDRIKKTAFSINIAKPSPNTAEEANGPIYPFEKLKECEEAPFNAPHFRFSRVE
GDRYDYNTVPFNEDDPMSWTEDYLSWWPKPTEYRACYIKVKINSPHEINVRSHNMGGTHP
RTVGQLYGLRDTRSIRDRDQSSVSAVCLEFKCSGMLYDQDRVDRTLVKVIPQGSCKRDSV
NSMLQEYLVNHLPLAVNNDTNEFTMLAPLDPLGHNYGIYTVTDQDPRTAKEIALGRCFEG
TSDGTSRVMKSNEGVALIFTCGDKEVTRQSVFQQLQNAPGRAIAGTTRPGRGNRRQRGDS
SAALRNSRRRSTRNPNRRQSS
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacaggctaacgtgggtctttcttcttctcctctttggaatttccattaccttc
actcgaggatccatgaagcacaatccagctgtgttccatactgacgatgactacgagtgg
acaacttggttcaacgtcgatcaccctggagggaagggagattacgagcagctggatgcg
attcgtttctattaccgagctcgtgtgtgcgattccccacgggcgctggaagctcgtact
acagactggataccagctcgtggaactggagagagagtgcacgctgaacccaccgtgggc
ttctggtgcatcaattcagaacaacctgaaggaaagaactgctctaattatgcagtccgt
ttcctttgcccaagagacacaaagccggacactcaaggagtgtggggtcagtggtcagaa
tggaccccgtgtcctgcacaatgtggccacgtcgcagcccagatccgctccagaacgtgc
acaacccaatccaggcagtgcaacggtctaaagatggagagcagacagtgcaaaggaccc
acatgtccaggttgtagtctgcagtgtgtgatgggcaaggcgaacacagactgtaatgct
tgcatgtgtgaggatcacatagtgcttgggtcagttcgtagagctggaagtctcccagct
cctggggcagccattctacttttaggcacaagccccaaacttctcacgctatctgaccac
aatggacacttccgtgtaccagggatctgcccagatggcaacactacactgctgatcaac
ctgcagggccatatgcctcagcaaattgtcatgccactgagctctgagcccacaactgta
cttcatgtgaagctggagagagcaagaaacctgtatgtgcaaaagaacccagagacaaaa
gcgaggagaatgggtcagacagctgccttctgctgcaaggttactggttcacctgaacct
gatgagtaccagtggtttcacaatggaactctgcttgagaagagtgtgtatcactatgat
gagacactggttttgaggaacctaagaatggatcaggctggagagtactactgcagagcc
agcagtgagaatggtgctattaaatccaagccagccacactctcagtcataggtcaagcc
gagccttcatgcagcccgaatcctgaaccccacatgatccgtctgcctcatgactgcttc
cagaaccacacaaactcattttactatgacgtaggaagatgtcccacagaaacatgtact
ggccaactggacaacggtattcgatgcaaagactccatatctttctgctgtggggtgtcc
aaaatggaagagagacagataacatgccaaggctaccagttacctactatggtggtcacc
cagtgtggctgcaaaaaatgtgtggaaacaaagacaatagttcgtggccgtgctactgca
gcagatacaggagagcccttaaggtttggacacatctacatggatggagaaacgattagc
cgaacaggatacaagggcactttctccatccaggttcccacagatactgaaaggctggtt
cttacttttgtagacaacatgcaaaagtttgtgaacactactaaagtacttttgttcaac
aacaaaggtggagctgtgtaccatgagatcaaaatgctgaggaaaaagcctcctgttacc
ttaagctcaactgacaccaacaaactacagcttggagaaatacaaggtgaggaacctatg
gctgagattgaaattccaccaaactctttctacagacagaatggagaggtatttgtagga
aatgtgaaggctagcgttaccttcatggacccaagagatgtatccacagcagcagctgct
caaagcgatctcaactttgttggtaccgaaggtgataccctccccttaagaacctacggc
atgttctcagtggacttcagggatgaggtggatggcgagtcactaaatgctggaaaagta
aaagttcgtcttgatgcggcccaagtgaagatgccggaacatctgaagtcaatgaagttg
tggtccctcaaccctgagactggtctttgggaagaagaaggacagcttcatatggagaag
aaacaacgtcgaaagcgagaagaaaggactttcctcataggaaacatggaaatccgagaa
agaaggctgtttaacttggacgtgcctgaaaacagaagatgctacattaaagtcagagct
ttccgtagtgaacgatttatgccaagtgagcaagtagagggtgttgtgataacactgatc
aatatggagcctacagctggttactccaccaaccctcgtgcatggggtaggtttgatagt
gtcatcactggtcccagtggtgcatgtctacctgccttctgtgatgaccaaagagcagat
gcttattctgcttatgtcatggcaaatcttggaggggaagaactggaagcagtagcttca
gcaccaaaattaaatcccaacatcattggtgtccctcaaccctatttgaataagctgaac
tacagaagaacagatcacgatgatgatagaatcaagaagacggcgttcagtatcaacata
gcaaaacccagcccaaacacagctgaagaagcaaatggtccaatttatccatttgaaaaa
ctgaaggagtgtgaagaagcgccatttaatgcaccacacttccgcttttcaagagtcgaa
ggagatcgctatgactacaacactgttcctttcaatgaggacgatccaatgagttggaca
gaagactatttgagctggtggccaaagccaacggaataccgagcttgctatattaaagta
aaaatcaacagcccgcatgaaatcaatgtccgttctcacaacatgggcggcacccacccg
agaacagttggccaactatatggccttcgtgacacccgtagtatccgagacagggaccag
tcaagtgtctcagcagtctgtttggagttcaaatgcagtggcatgctctacgaccaagac
cgagtggatcgcaccctagtgaaggtgatcccacagggtagttgtaagcgagacagcgtc
aacagcatgctacaagagtacttggtcaatcatcttccactggctgtcaacaatgacacc
aatgagttcaccatgcttgcaccactggatcctttgggccataattatggcatctacaca
gttactgaccaagatcctcgcacagctaaggagatagcacttggacgctgttttgagggt
acatcagatgggacatcacgagtaatgaagagcaatgaaggtgtggcattaatcttcact
tgtggtgacaaagaggtcaccagacagagcgtgttccagcagctccagaatgctccaggc
cgggctatagcgggaacgactcgtccagggagaggcaaccgaaggcagagaggagactct
tcagccgcactccgtaacagccggagaagaagtacacgcaaccccaacagacgccaaagc
tcataa
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integrated database retrieval system
