Pangasianodon hypophthalmus (striped catfish): 113540963
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Entry
113540963 CDS
T05759
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113540963
Membrane trafficking [BR:
phyp04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
113540963
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
Ig_2
ig
LRR_9
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
113540963
NCBI-ProteinID:
XP_026793474
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MTFLQVTSRMVAGVMSGHSYLVACWQPILILMLGTVLSGSTIGCPSRCECNAQERSVLCH
RRKLVALPEGIPIETRLLDLSKNRLKAINPEEFINYPHLEDLQLNENVISVIEPGAFSNL
FGLRTLGLRNNKLKLIPPGVFTGLSNLTRLDISENKIVILLDYMFQDLYNLKELEVGDSE
LVFISHRAFHGLSSLEQLTMERCNMTSVPTEAFSHLHTLLVLKLWHFNVNLIRDFSFRRL
YRLKVLEITNWPFLEALTDKSLHGLNITTLSVTHCNLTAIPYVAIQHLVYLRALNFSFNP
IEIVEGNKLHNLMRLQVFDLVGGRLVTIEPYSFRGLNYLKVLNISSNSLSTLEESAFHSV
GNLETLALYDNPLACDCRLLWVFRRRWRLNFNKQQPSCAAPEFVQGKEFKDFPDILPANY
FTCQKSKIRDHKPLQRFVDEGTTVHFACQADGDPTPVIMWQSPRKQFITTKSVGRLSVSL
DGTLEVRYAQIQDNGTYTCIATNAGGNDTKLAHLHVHSYSPNWPHQPNKTFAFISNQPND
SGANETGRSVPFPFDMKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNAKPNIEIEYV
PRRVEGQTSPTEETHKIRMKMM
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacatttctgcaggtaaccagcagaatggtggctggcgtgatgagcgggcacagctac
ctggtggcatgctggcagcccattcttatcctgatgctgggcactgtgctgtcgggttcc
accataggatgcccgtcccgctgtgagtgcaatgcccaggaacgctctgtcttgtgccac
cgcaggaagctggttgcccttccagagggaatccctattgagacgcgactgttggacctg
agcaaaaaccgcctgaaagccatcaacccagaggagttcatcaactatccccacctggag
gacctgcagcttaatgagaatgtcatctcagtcatcgagccaggtgcattcagtaatctg
tttggattacggacgttaggactgcgcaacaacaaactgaagctcattccaccaggtgta
tttactggtttgagtaacctcaccagactggatataagtgagaataaaatagttatcttg
ttggattacatgtttcaggacctttacaatctaaaagaactggaagtgggagatagtgag
ctggtcttcatctctcatagagcctttcatggactcagtagtttagagcagctcaccatg
gagaggtgtaacatgacctcagtgcccacagaggccttcagccatctccataccctgttg
gtactcaagttgtggcattttaatgtcaaccttattagggatttttccttcaggagactc
taccgactgaaagtgttagagataacaaattggccctttctcgaagccttgaccgataag
tccctccacggactcaacattaccacattgagtgtcacacactgcaaccttactgccatc
ccatatgtggctatccagcaccttgtgtaccttcgagctctcaacttttctttcaatccc
atagagattgtggagggcaacaaactgcacaacttgatgaggctgcaggtatttgactta
gtagggggtcgattggtcactattgagccttactctttcagaggactgaactaccttaag
gttctcaacatttccagcaatagcttgagcactttagaagagtctgcctttcactcagtt
ggtaatcttgagaccctggccctatatgacaaccccttggcatgcgactgccgcttgtta
tgggttttccgtcggcgctggaggctcaatttcaacaagcagcagccatcttgtgctgcc
cctgagtttgtgcaagggaaagagtttaaagatttcccggatattctcccagctaattat
ttcacttgccagaaatctaagatccgggaccacaaaccccttcagagatttgtggatgaa
gggaccacagttcattttgcatgccaagcagatggagacccaacccctgtgatcatgtgg
cagtctcctcggaagcaattcatcaccaccaaaagtgttggacgtctgtcagtctctctg
gatggcaccctggaagtacgatatgcccaaatacaagacaatggcacatatacatgcatc
gcgaccaatgcagggggtaatgacaccaagcttgctcatttacatgttcatagttattca
cccaactggccccatcagcctaataagacatttgctttcatctccaaccagcccaatgat
agtggtgccaatgagactggtagatcagtcccatttccatttgatatgaagactcttatc
attgctactactatgggatttatttctttccttggagtggttttgttttgtcttgtactc
ctctttctttggagtcgggggaaaggtaacgccaagccaaacatcgaaattgagtatgtg
ccacgtagagtagaaggccagaccagtccaactgaggaaacccataagatcagaatgaaa
atgatgtaa
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