Pangasianodon hypophthalmus (striped catfish): 113540990
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Entry
113540990 CDS
T05759
Symbol
rel
Name
(RefSeq) proto-oncogene c-Rel isoform X1
KO
K09254
c-Rel proto-oncogene protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113540990 (rel)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
113540990 (rel)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
113540990
NCBI-ProteinID:
XP_026793525
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MDVGEPCVQIFEQPKQRGMRFRYKCEGRSAGSIPGERSSDNNRTYPSIQILNTCGRGKVR
VSLVTKNEPYRPHPHDLVGKDCKDGYYEAEFGPERRVIAFQNLGIQCVRRREVRDAIMQR
MNRGLNPFNVPREQLLQTEEYDLNVVRLCFQVFLQNETGSYSIPLPPVISNPIYDNRAPN
TAELRICRVNKNSGSVKGGDEIFLLCDKVQKDDIEVRFFTQTWEARGSFSQADVHRQVAI
VFRTPAYCDTSITSPVTVHMQLRRPTDQEVSEPMEFRYLPDDKDPYGCREKKRKIENLMK
SFPSFTPMGRKAVSQPPMMGPRIKSEPNSYGKPPHHAIMRPNQQMMYNNTYQPQRMMPST
SASPASVSFNQGQWAIPSLHFSPASSNPGASNGVGMSQVNPVNPAPSLSTTGESGNSLPL
LNSVDLEFLETQDPSASQPRQEQLEHSVQHSQQPLHRKETMPAGESIWQNFDLSQASGTQ
NGPANTGLMGINYTYSDSHDGNEMLHSLVGPQTGLHLKQEPQGQSTLAMLDPNNSNLFDC
TQSYPMLNYPATSSSNQEAMRHAASSGASGSVQRNTQNPSFSLTSMVQEAHLDSLNWPYG
QFGGE
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgggagagccctgtgttcagatctttgaacaacccaaacaaagaggcatgcgc
ttcaggtataagtgcgaaggccgttcagcggggagtatacctggagaaagaagttctgac
aataatagaacttatccaagcattcagattctcaacacctgtggaagaggaaaagtgcgt
gtgtcattggtaaccaaaaatgagccatacagaccacacccacatgacctggtggggaaa
gactgcaaggatggatattatgaggcagaatttggacctgaacgcagagttattgccttc
cagaacctgggcatccaatgtgtaaggagaagagaggtcagggatgccataatgcagaga
atgaaccgaggcctcaaccccttcaatgttcctagggaacagctcttgcagacggaggaa
tacgacctgaacgtggtccgtctatgtttccaggtctttctgcaaaatgagactggatcc
tacagcattccgctgccacctgtcatctccaatcccatctatgacaaccgtgccccaaac
acagctgagctgcgtatctgccgtgttaacaaaaacagtggcagcgtgaagggtggcgat
gagatcttcctgctctgtgacaaagtccagaaagatgatatagaagtgcgcttcttcacc
cagacctgggaggccagaggctccttctcccaggcagatgtgcacaggcaggtggctatc
gttttccgtacgcctgcctactgcgacacctccatcacatctcctgtcactgtgcacatg
cagctacgccgccccactgaccaggaagtgagtgaacccatggagtttaggtacctgcct
gatgacaaagatccatatggctgtcgagaaaagaagcgaaaaattgagaatctaatgaag
tccttccccagtttcacgcctatgggcagaaaagcagtatctcaacctcctatgatgggc
ccaaggattaaaagtgagccaaattcctatggaaagccccctcatcatgctataatgagg
ccaaatcaacaaatgatgtacaacaatacctatcagccccaacgtatgatgccatccact
tcagcatctccagcttcagtatcattcaatcaaggtcaatgggctattccttcacttcac
ttcagcccagctagcagcaaccctggggccagtaacggagtgggtatgtcacaggttaac
ccagttaacccagctccctccctaagcactaccggggagagtggaaacagcctcccctta
ctgaattcagtggatctggagtttcttgaaactcaagacccttctgccagccagccccgg
caggagcagctggagcacagtgtccagcattcacagcagcctctccacaggaaggaaacc
atgcctgctggcgaaagcatctggcaaaactttgatctctcacaagcatcaggaacacaa
aatgggcctgcaaacacagggctgatggggataaattacacatattcagatagtcatgat
ggaaatgaaatgcttcatagcctagtaggccctcagacaggtcttcatttaaaacaagag
cctcaaggtcaaagtaccttggcaatgctggaccctaacaactccaacctctttgactgc
acacaatcctaccccatgctcaactatccagcgaccagcagcagcaatcaggaggccatg
agacatgcagccagcagtggagccagtgggtcagtacagaggaacacacagaacccatcc
ttctccctcaccagcatggtccaagaagcccacctcgatagcctcaactggccctacggt
caatttggtggcgaataa
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