Pangasianodon hypophthalmus (striped catfish): 113541014
Help
Entry
113541014 CDS
T05759
Name
(RefSeq) immunoglobulin superfamily DCC subclass member 4-like isoform X1
KO
K22657
immunoglobulin superfamily DCC subclass member 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phyp04515
]
113541014
Cell adhesion molecules [BR:
phyp04515
]
Immunoglobulin superfamily
DCC/UNC5 family
113541014
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
V-set
Fn3_VIN3
C2-set_2
Ig_RIMBP2
Tissue_fac
fn3_SORL1
Ig_ILCR1
Motif
Other DBs
NCBI-GeneID:
113541014
NCBI-ProteinID:
XP_026793566
LinkDB
All DBs
Position
Unknown
AA seq
1252 aa
AA seq
DB search
MCLCCLPAFPGTLRERGLNEDGITDRVDLNACSFALPFFFFFFFFKFPLGWKKKKKKKIK
RRMSMALNTWLLCLLSIFRCGLAVQENPMSVELSCGAGPIHVVLEPPRPLLLDCHLGSAE
TPLNITWLQDGVVLSESEAVRLLPNSSLLLLPSAHDGKVSAGMEGAYSCLSGSSFGTLTS
RSVTLQLARLSTFLRDPEPQVVPAGGTARFECHIDGVPAPSITWEKNHMPLPVPAESVNT
PRFVTLPNGILQILDVTADDGGLYRCVASNSAHKLYSQDASLTVTSGHSEESEVMIVAPP
RDLTVVLGRPAVLECMAHGQPKPFVSWSRQDGKPIAADVLVLATNLIIPHTLSHHDGVYV
CRANKPKTREFVSASAEIRVLAPPVIVKPPESVSLSRGNTARFVCNSSGSPAASLLWLKD
GERLRWTARVKTQSPGVLLINQLRPDDAGYYQCLASNVLGSACATAKLSVIVRAGLPSPP
LHLQATSHSSTSVLLTWDPPEHNREQVIGFSIHYQRATAGFDNMEYQFAVNNDTTEFHVK
ELQPHTAYTFYMVAYSPMGASRPSQSITVETVEDAEEVFSVELDGNETQVVLRYLKPNHT
NQLQMAAGTRAGFGELSEWTFPQTPNFTQVLFPPTELKVTAKMHSLHVTWQPPPNHTQIT
SYKLAYREVDGEEAASQKSPAADASRIRLRKRVKHYEITGLAPDRLYEVKVWACNKQAEG
YPAIWKGRTEKFTDRVRPLDHPPPLPPSIVKAQANSSTSIWLRWEKPPFSNVRIINYTIR
CSPAGNRNASLVSYYTSTSQEILLGALKPFTRYELAIQSNGISTGGPFSSTVEESTLADR
PSSPPTDLQLSAIDSFSVLVSWRPPLEPNGIIVSYRMLYSGNLSQPDDLWTNLSHDGSVT
STEVLGLMSGTRYYFKMGACTEVGMGPFSPVKDVHTPPKKYELDIHAVTGIIVGVCLGLL
CILVCMCVSFRNGKSRDAPAGLEPSLLNPQYRRSAHPVPAVVPNCTDCHELETLMPPGAQ
DPVLPPTEPNEQQSLMGSVGGAYDTPTDLKPSWNGSVSREWASRISTYRETMTENSPCLI
NGPRDTTESKNSREEQPHSLGSNQVEADVIVHSELSDPVEEVQELQSDTNLSLGSPVSRF
PCREDASPPSLSSIKPDTEIHPASPCSPNHFQDVLANHNGPLENGLAQLTLGGVTEEGVS
PEHLQPALENGDHRLRPSRKALSQIGLSTSPPAFARSGLVHSTSGAHSYLCS
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttatgctgcctgcctgcgtttcccgggacactgcgcgagcgaggacttaacgag
gacggtattacggatcgtgtcgatttgaacgcatgtagctttgctttgcctttttttttt
tttttttttttttttaaatttcctctcggctggaaaaaaaaaaaaaaaaagaaaatcaaa
aggaggatgtccatggcgctgaatacctggctcctctgtctgctttcgatattccgctgt
ggactggccgtgcaagaaaatcccatgtctgtggagctgagctgtggtgctggtcccatc
catgtggttctggagcctcctcgtcctctgctgctggactgccacctggggagcgccgag
accccgctcaacatcacctggctccaggacggggtggtgctgagcgagagcgaggccgtc
cggctgcttcccaacagctccctgctgctcctgccctcggcccatgacgggaaagtgtca
gcgggaatggagggagcctacagctgtctgagcgggagctccttcgggacgctcaccagc
cgcagtgtcactctgcagctcgccagactttctactttcctccgggaccccgagcctcag
gttgtaccggccggaggcactgcgcgcttcgagtgccacatagacggagtacctgctccc
agcatcacctgggagaagaaccacatgccgcttcccgtacctgccgaatcagtcaatacg
ccgaggtttgtaacacttccaaacggcatcctgcagattttggacgtcacggcagacgat
ggaggtctataccgctgcgtagcatctaactccgctcacaagctctacagccaagacgct
tcactaacagttacatcaggtcattcagaggagagcgaggtgatgattgtagctcctccg
cgagacttgacggtggttttggggcggccagcagtgctggagtgtatggctcatggccaa
cccaaacctttcgtgtcctggagtagacaagatgggaaacccattgctgcagatgtgctc
gtcctcgccaccaacctcatcatacctcacacacttagtcatcatgacggagtgtatgtg
tgtcgcgccaacaagcccaaaacgcgagagttcgtctcggcctccgctgagatccgcgtg
ctggctcctccggtgattgtgaaacctcctgagtcggtatcgctctctcgggggaacacg
gcgaggtttgtgtgtaacagttcgggttctccagctgcgtctctgctctggctgaaggac
ggtgagcgtctgcgctggacggcgcgggtgaagactcagagccccggggttctcctcatc
aaccagctgcggccagacgacgctggatattaccaatgcctcgcctccaacgtcctgggc
tccgcctgcgccaccgccaaactgtcagtcattgtgagggcggggcttcccagtcctccg
cttcacctccaggccacgtctcactccagcacctccgtcctgctcacatgggatcctcct
gagcacaatcgcgagcaggtcattggcttctccatccactaccagcgcgccacagcaggg
tttgataacatggagtatcagtttgcggtgaacaacgacacgacggagttccacgtgaag
gagctgcagcctcacacggcctataccttttacatggtggcttattcgcccatgggagcc
agccgtccatctcagtccatcactgtggagacggtggaggacgcagaagaggtgttctca
gtggagttggatggtaatgagacccaggtggtcctgagatatctgaagcccaatcataca
aaccagttacagatggctgcaggaacacgtgcaggttttggtgagctttcagagtggacc
tttccccaaacgcccaactttactcaggtgctctttcctcccactgagctcaaagtgaca
gctaagatgcattccctccacgtcacatggcagccgccgcccaatcacacgcagatcacc
agctacaaactggcctatcgggaagtggatggcgaggaggcggccagtcagaagagtcct
gcggctgatgcgtcgcgcatcaggctacgcaagcgagtaaagcattacgaaatcacaggc
cttgctcctgatcgcctgtatgaagtgaaagtgtgggcgtgtaataagcaggctgaaggc
tatcctgccatatggaagggccggactgagaaattcactgatcgagttcgacccctggac
caccctcccccactgccccccagcatcgttaaagctcaggctaacagctccacgtccatc
tggctgcggtgggagaaaccgccgttcagtaacgtacgcatcattaactacacgatacgc
tgcagccctgctggcaaccgcaacgcctccctcgtctcctactacaccagcacgtctcag
gagatcctgttaggtgcactaaaacccttcacccgctatgagctggccatccagtccaac
ggcatcagcaccggcgggcccttcagcagtacggtggaagagtccacactcgctgacaga
ccctcatccccacctacagacctacagctgagcgccatagactcgttctcggtgttggtg
agctggcgcccccctctggagcctaatggcattattgtaagctatcgaatgctctatagc
ggcaacctcagtcagccagatgacctgtggaccaacctgagccatgacggatctgtcact
agcacagaggttctgggtcttatgagcgggacgcggtactactttaagatgggggcgtgc
acagaggttgggatggggccgttctcacctgtaaaggatgtacacacacccccgaagaaa
tacgagttggacattcacgctgtcactgggatcatcgtcggtgtgtgtcttggtcttctc
tgcatcctggtctgcatgtgtgttagcttccgcaacggaaaaagccgtgacgcccctgca
gggttggaacccagtctgttaaacccccagtaccgcaggagcgcccatcctgtacccgct
gtcgtacctaactgcacggattgccatgaactggagaccctgatgccccctggagcccag
gacccggttctgcccccaactgagcctaatgagcagcagagcctcatgggtagtgtaggt
ggagcttacgatacaccaacagatctgaagccaagctggaacgggtcagtgagccgggag
tgggccagtcggatcagtacctacagagagacaatgacagaaaactcgccgtgtctcatt
aacggacctcgggacactacggagagcaagaacagtcgtgaggagcagccgcattctctc
ggctcgaaccaggtggaggctgacgtgatcgtacactcggagctgtctgatccagtggag
gaggtgcaggagcttcagagtgacactaatctctctctggggtctcctgtttcacgcttc
ccttgcagagaggatgcttcaccaccatcattatcctcaatcaaacctgacactgaaatc
catcctgcatctccctgctcccccaaccactttcaggatgtactggctaatcacaacggg
ccgctggagaacgggctggcccagctgactctgggaggcgttactgaagagggggtatcc
cctgagcacctccaacccgctctagagaacggagatcacagactccgcccttcaaggaag
gctctgtctcagataggactgtccacttcccctccagccttcgccaggtccggcctcgtc
cactctacctcaggtgcgcacagctacctgtgctcctaa
DBGET
integrated database retrieval system
