Pangasianodon hypophthalmus (striped catfish): 113541079
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Entry
113541079 CDS
T05759
Name
(RefSeq) ski-like protein
KO
K18499
Ski-like protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
113541079
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ski_Sno_DHD
c-SKI_SMAD_bind
TCAD9
Transp_Tc5_C
TPR_AlgK
Motif
Other DBs
NCBI-GeneID:
113541079
NCBI-ProteinID:
XP_026793673
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MAMVQNSRPHPEKDQALLRVPVKRLMRERQIEAAPIKKRVMAALNLSCKKASESSLSSSL
SSSRTPVIKTEYVEKDSECLNYQHVSKGQDGRDGALDLSPALRHTLAQFTLSSQCSLGGP
AAFSGQYSQEKLAPSLSQASVAVGPLLVPPDSSTELVLCTLEGESISCFSVGGELRLCLP
QVLNTVLRDFSLQQINSVCDQLYVYCSRCNASQLHVLKVLGVLPAGAPSCGLITLTDAQR
LCNTLLHPGDSVPAGPRKDHRLAEEEEREAEEAGGFWVEHQCLGKCQGLFVPRLYAAPGA
PCIRCSQCRQLFCPERFVMHSHRQPDKRTCHWGFDSAKWACYLQLGRRYHGTADEGKLEQ
LLEAMKLKFGGILLDAKTSHLVRVAIRLFRNLLIYSRLCFHEARYESVMSNDHVIEQMHD
GDVSEDNMSLRKLQDADGSVRVAWLSSPSLHKQQEPRQQGRETESEWEGMAFNAPCFPSS
WYLYMHDKLSVSGAALDSTRAADKDDGAPRAETQKPVKKAPEEAEDGERKASAGGKKTSR
PASQSQRSNPDERPRVSIETPACEKSLEENKDSMVVEVLQMYSAQQEKLQSTLRKQQQLE
KLLELRQRLDRAEEDREELQEELRREREAREKLERIICELRQQMKESVPPSALDSPLSTS
SSDVLLSPAP
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggccatggtgcagaacagccgtcctcaccccgagaaggaccaggctctgctcagagtg
ccggtgaagaggctgatgcgagagaggcagatagaagcagcgccgataaagaagcgcgtg
atggcggcgcttaatttgtcatgcaaaaaggcttcggagtcatcgttgtcatcgtcactg
tcatcgtcaaggactcctgttataaagactgaatatgtagagaaggactctgagtgtctt
aactatcaacatgtctctaagggacaggacggacgagacggcgctctggacctgagcccg
gctttgagacacactctggcccagtttactctgagcagccagtgttctttaggaggccct
gctgccttttctggtcagtacagccaggagaagctggctccgtctctcagccaggccagc
gtggcagtcggacccttactggtgcctcctgacagctccacagagctcgtgttgtgcacg
ctggagggcgaatccatttcctgcttctcagtgggtggtgagctgcgcctgtgtttgcct
caggtgctcaacacggtgctgcgagacttctccctgcagcagatcaactccgtgtgcgat
cagctctacgtctactgctcgcgctgcaacgcttcccagctgcacgtcctcaaagtgctg
ggcgtcctcccggccggcgctccgtcctgcggcctcatcacgctcaccgacgcccagcgg
ctctgcaacaccctgctccacccgggcgacagcgttcccgccggcccgcgtaaagaccac
cggctcgctgaagaagaggagcgagaagccgaggaagccggagggttctgggtggagcat
cagtgcctggggaagtgccaaggcctgttcgttcctcgtctctacgccgctccgggcgct
ccgtgcatccgatgctcgcagtgccgacagcttttctgtcccgagcgcttcgtcatgcac
tcgcaccggcagccggacaagcggacctgtcactggggcttcgactccgccaaatgggcg
tgttacctccaactggggcgacggtaccacggcacggctgacgaggggaaactcgagcag
cttctggaggccatgaaactgaagttcggcgggattcttctggacgcgaagacgtcgcat
ctggtaagagtcgcgatacgtttattcaggaatttattaatttattctcggctttgtttt
catgaggctcggtatgaatccgtcatgagtaatgatcatgttatagagcagatgcatgat
ggagacgtgtcggaggacaacatgtccttgcggaagctgcaggacgctgacggttcggtc
agggtcgcctggctttcctcaccgagtctgcacaaacagcaggaaccacggcaacagggc
agagaaacagagagcgagtgggaggggatggcgtttaacgcgccctgttttccttccagt
tggtatctttacatgcacgataagctgagcgtctccggcgcggccctggactccacgcga
gctgctgataaagacgacggcgctccgagagcagagacgcagaaaccggtgaaaaaagcg
cccgaggaagcggaggacggcgagcgcaaagcgtccgcagggggcaaaaaaacaagtcgc
ccggccagccaatcacagcgcagcaatccggacgagcggcccagggtttccatagaaacg
ccggcatgtgagaagtctttggaggagaacaaggacagcatggtggtggaggtgcttcag
atgtacagcgctcagcaggagaagctgcagtccacgctacgcaagcagcagcagctggag
aagctgctggagctgcgtcagaggctggaccgcgctgaggaggaccgtgaggagctgcag
gaggagctgcggcgtgagcgtgaagctcgggagaagctggagaggatcatctgtgagctc
cggcagcagatgaaggagtcggttcctccgtcggctctcgacagcccgctgtccacctcc
tccagcgacgtgctgctgtctcctgcaccgtaa
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