Pangasianodon hypophthalmus (striped catfish): 113541103
Help
Entry
113541103 CDS
T05759
Symbol
rttn
Name
(RefSeq) rotatin
KO
K16484
rotatin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
phyp03037
]
113541103 (rttn)
Cilium and associated proteins [BR:
phyp03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
113541103 (rttn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RTTN_N
TPR_Trm732_C
Motif
Other DBs
NCBI-GeneID:
113541103
NCBI-ProteinID:
XP_026793696
LinkDB
All DBs
Position
Unknown
AA seq
2087 aa
AA seq
DB search
MDVSSLIKKLAHSLVEIRVRSLRNIVSKLQLSLVSPSDLVQERQLFINLLHWFNFPEVPL
QEEVLQLINTLATHPTGAFMLRDVGGVDFLTQLLSNIDPQLRNITETILDQLFHLHIYPQ
STCSDQPLSSDFQPVEEMSVRGYFQQNAPSQTDAAPPPSVSANTSVRCLTFSVFPWLSLT
ATDRHILSSNESSLRSDNPDLVRTTCELLRDVIMQDFPAEIFLQRPSIVQNLVQLLSVRS
ENDSSSLALHALACLQQLCGNLKSRLRFYRDASFCSAKHDPLSQNSSTSYPQEARGTQRS
GVSTPEDLSPRPSALGRPGMRVRGDGQDGDAASTSSSSGSSQREFPPGPNLEPDGEDPPE
LRVHQWNMARFCMETLQHTLPLLRTEKMKVFQKALELLSDILALLRVIVSPHELWEECSI
TANELREKLLECMEKLGDIMCHHCHVASSEESDSTLIHHRMSYTGTSVFTIRLLQTLLPV
EKASENLPESTVSAVFHLCLDFPFGLAFPSIHESAVAYLEQSNSENHSLYCRVSRAANTM
EATCSFLKEVQAEGEKNWLELLELAGQAMDGFPYHQHLPLIKEFVRICSYLWKSAQASPL
LQMESQKILLKLLSHPLLPVKAETYARTLDVVKECLGIHNVSRPASSICSGVHFLFHPRV
LYEISAFGLHDQAKEVNSAAKDLLLYLLKGRLMMTALSWSRFNESLYPVIPVLQSHAGTE
DALGNSILLISGLSDEIGGTAHSAAPRLRAVIRLLFTKQHVVRSTAAQHLSPHLASSEDN
RTSRLAVDSSTLSSLPSLYVTDKCVDIRLDDSNKSYLKVECVNKLYSIFTSETVDMVLRK
SAAEQLVVVLQDTTTHAVLKTQGLTDKLVALITESVNSCGGSVECLSEPSITMLRKLVYA
DPSLRHTLAQQPAFLLTLLQASLLMKANQRDVTEAAALMCFLLFDEIATVDVCTGKADKD
TAITPFSLPVCVIRRYNLPFRAASHHAVSPNCIVLPLYTDLMELRAAKEALSFSWNRAWH
CGTDTLLTRRRDNATHTPEFHADLVMSESQVMSVRVCDVRAGLQECVNAIRSAGSHTGVT
FALTRIHLYLLTDQLALHLTSLSLPPSCRMCMLLSGPLASEFAVRLLQCLRVSDAPRFYG
LPSLERSLRSMTHTTALPGWSTHTSSMEPHTLCQKYLSGLLEVISSFYVEWGGNAMSFMG
KGVTKNAVISLLHLSHEMMSESKEKDWMSLWSLGPEQSADDPCSAQFGLAWLIPLWVDRD
PEVRCASLALGAALSTLESGCVMLSNSCQNISGGLWATLLNILLERQECSMVRREAAFLL
QNLLVMPMPANTEEAKDCFWQSPCVHDEGSGVSLVGLPALQALLYHCHFFDHVGQMVRSC
YTGRYTPTHPWPISASADVDDSVRQWRGSTAVLNHTQGSGSISTSSTLLLSDTRSPVLSS
SVAAQEPPFNRLSTQGQSDSDTSDSCLSHECVEGSECISVVTPHLLSAVCGLLTNLLCVL
PEFTHTALQENHILQGLLSVLDAVEIERCLNELNTPDLLPADVEDARSQVLSSVCYVRSV
CKLVQADVVLSEDCLSQSELIKPLLNNLISILTLSHTHLDVHTQNALLHTWTDVFTLLAS
LLRRNYAACGPHVRGTLGKRWQRFSDTIRTCVDQCGSDSSLYNVSAQFLCVLFSEEAKKR
GTSEEKSASLTAALNSESGEKLCELLLERYDKTQFQDPLKKVTAKVLMPLLACSSSAQSY
ACKAGLIDSCVEQIKQIHSQLHLESVRPGKTTHRKKDENSMKELRMVLEILRNCLYQHKE
CKEVATDLKLSSVLLSLWPWLLLNDSGMIAALELLCVYTANCAAACSAVCGSSAHAALPR
NPVTNSLMHAVMKLASQVPPDNNSIHALSFSLLANLSISRDCRGLLQKSNFLQHFLSLPM
PRVSGKSSKSSTAAVILSQWLQLLLNISFEEDGQQMIMKMRGALEMLTDLAQGKHGDKKH
TALLILHNICFCSANKPRVLACDKAVELLVSCLESSSLNVRALGASALWALLHNYQKAKV
TLKCPSIRLKVDGAYALTKKGAEPKIEENTNIYLLKCLEHLSRLLNT
NT seq
6264 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatcatctctcattaaaaaactcgctcactcgttagtggagatccgagttcgc
tccctgaggaacattgtctccaagctccagctcagtctcgtctccccgtctgatcttgtt
caggagcgacagctcttcatcaacctgctgcactggtttaacttccctgaagtcccgctg
caggaggaagtgctgcagctcattaacacactcgctacgcatccaaccggagcctttatg
ttgagagatgtaggcggagtggactttcttacacagctcctgtccaacattgacccccag
cttcgaaatatcacagagacgatcctcgaccagctcttccatcttcatatttacccgcag
agcacttgctctgaccagccattgagctccgattttcagcctgtggaggagatgtcagtt
agaggatatttccagcaaaatgcaccgagccaaacagatgctgcgccacctcccagtgta
tcagcgaacacctctgtaagatgcttaacgttttcagtttttccttggttgtctttgact
gcaactgacagacacatattatcatcgaatgaaagctctttgagaagcgataatccagac
ttagtgcggaccacctgcgagcttctgcgagacgtcatcatgcaggactttccagcagaa
atattcctgcagcggccaagtatagtgcaaaatctggtgcagcttctcagtgtgagatca
gagaatgattccagctcgttggctctccacgctctggcctgccttcagcagctctgtgga
aacctgaaaagtcggctgcgcttctacagagatgccagcttctgctcagccaagcacgat
ccactctctcagaactcctcgacgtcgtatcctcaggaggccagagggacccagaggtca
ggggtttcaaccccggaagatttgtccccccgcccttctgctctaggacgtcctggtatg
agagtccgaggggacggacaggacggcgatgccgcctccaccagcagcagcagcggcagc
tctcagagagaatttccccccgggcccaacctggagccggatggcgaggatccgccggag
ctccgggtgcatcagtggaacatggccagattttgcatggagaccctacagcacacactt
cctctcctcaggacagagaagatgaaggttttccagaaggcgctggagctgttgtcggat
atcctcgcgttgctaagggtcatcgtgtccccgcatgagctgtgggaagagtgcagcatc
actgcaaatgaactgagagagaagctgctggagtgtatggaaaagctgggagacatcatg
tgccatcactgtcacgtggcatcatcagaggaatctgactcaactctgattcaccaccgc
atgtcctacacgggcacttctgtcttcacgattcgccttctgcaaaccctcctacctgtg
gagaaggcaagtgagaaccttcctgagagcacagtgtctgctgttttccatctctgtctg
gatttccccttcggtctcgcatttcccagcattcacgagtcagcagtggcctacctggag
cagtcaaactctgaaaaccatagcctgtactgcagagttagccgagctgctaacacaatg
gaggccacgtgttcttttctaaaggaggttcaggctgagggagaaaagaattggctggag
ctgctggaactcgctggccaagccatggatggctttccctaccatcagcacctaccgctc
atcaaggaattcgtccgcatctgctcctacctgtggaagtctgctcaggcaagcccactg
cttcagatggagagccagaagattcttctgaagcttttatcacatcctctgctgccagtg
aaggctgagacatacgcacgcactctggatgtggtcaaggagtgtttgggcattcataac
gtgtccagaccagcttcatccatctgcagcggtgtgcatttccttttccaccctcgcgtc
ctttatgaaatcagtgcctttggccttcatgatcaagcaaaagaggtgaattcggctgcc
aaggatcttcttctgtacctgctcaagggacgattgatgatgactgctttgagttggagt
agatttaatgaatcgctttacccggtcattcccgtgctgcagagtcacgcaggcacagag
gatgccctgggaaacagcatcctgctgataagtgggctctcggatgagattggaggcacg
gcccattccgcagcacctcgactccgcgccgtaatcagactgctcttcaccaaacaacat
gtggtgagaagcacagcagctcaacacctgtcacctcatctggccagttcagaagacaac
agaacgtcccggcttgctgtggacagctcgactctgtcatcactgccgtctctctatgtt
actgacaaatgtgtggacatcagactagacgactccaacaagtcttaccttaaggtggag
tgtgtgaataagctgtacagtatctttacctcggagacggtggatatggtcctgcgcaaa
tccgcagccgaacagctggtggttgttttgcaggatactacaacgcacgctgtactgaag
acgcagggactgacggacaaactcgtggctttgattacagagagcgtgaacagctgtgga
gggtctgtcgagtgtctgtccgagccgagcattacgatgctgaggaagttagtatatgca
gatccgtctctgcgtcacacactggctcagcaaccggctttcctcctcactctgctccaa
gcctccctgctgatgaaggccaatcagagagacgtgactgaagccgcagcactgatgtgt
ttcctgctttttgatgagattgccacagtggatgtgtgcaccggaaaagctgacaaagat
acagccatcactccgttctctctgccggtctgcgttatcagaaggtataatctaccgttt
cgcgctgcgtctcaccacgcggtgagtcccaactgcatcgttctgcctctttatactgat
ctgatggagctgagagctgccaaggaggcactgagcttcagctggaacagagcctggcac
tgcggcaccgacactctgctcacacgcaggagagacaacgccactcacacacctgagttt
catgctgatctggtgatgtcagagtctcaggtcatgtcagtgcgagtgtgtgatgtgaga
gcagggcttcaagagtgtgttaatgcgattcggtcagccggctcacacaccggggtgacc
ttcgctctgaccagaatacacctttatctcctgactgatcagttagcccttcatttgacc
tccctctctctccctccctcatgcaggatgtgtatgctcctctccgggccgttagcatcg
gagtttgccgtccgtctgctgcagtgtctccgtgtttcagatgccccacgtttttacggc
ctcccctctctggagcgttctctacgcagcatgacacacaccaccgctctgcccggctgg
agcactcacacaagcagcatggagccacacacactctgccagaaataccttagcggccta
cttgaggtaatttcctctttctatgtggagtggggagggaatgccatgtcctttatggga
aaaggagtgaccaagaatgcagtgatctctctgcttcatctgtcccatgagatgatgtct
gagagcaaagagaaggactggatgtctctctggtctcttgggcctgaacagagtgctgat
gatccgtgttcagctcagtttggcctcgcttggttaatcccactgtgggtggatcgtgac
ccagaggtgcgctgtgccagcctggcgctgggcgcggctctctctacgttagaaagcggc
tgtgtgatgttgtcgaatagctgccagaacatctcaggcggtttgtgggcgacgctgctc
aacatcctgctggagagacaggagtgcagcatggtgcgccgagaggcagcgtttctttta
caaaacctgcttgtgatgccaatgcctgccaacacagaggaggccaaagactgcttctgg
cagagcccatgtgttcatgatgaaggatctggcgtgtcgttggtgggtctcccggcactg
caggctcttctctatcactgccatttttttgatcatgtgggtcagatggtgaggagttgc
tacacgggtcgatacactcccacacacccttggcccatcagtgcctctgctgatgtagat
gactctgtgaggcagtggagaggcagtacagctgtgctgaatcacacacagggttcagga
tccatttccacctccagcactttgctcctgagtgacactcgttctcccgtcctctcctcc
tctgtagcagcacaggagcctccattcaacagactcagcacacaaggtcagagtgactca
gacacctcagattcgtgtctgtctcacgagtgtgtagaaggatcagagtgcatctctgta
gtaacccctcacctactgtcagctgtgtgtggattactaaccaacctgctgtgtgttctg
cctgagttcacacacactgcgctccaagagaaccacatcctgcagggcttgctcagtgtg
ttagatgcagtggagatagagcgatgcctgaatgagcttaacacacctgatctccttccg
gctgatgtggaggatgccaggagccaggtactgagtagtgtgtgttacgtgcggagtgtg
tgtaagctggtacaggccgatgttgtgctcagtgaggattgtctctcccagtcagagctc
attaaacctctgctgaataacctcatctccatcctcacactctctcacacacacctcgat
gtgcatacccagaatgcattgctacacacctggacagatgtgtttacgctgctggcgagt
ctgctgcgcaggaactacgcggcatgcggcccacatgtgcgcgggactctggggaaacgc
tggcagcgcttctcagacaccatccgtacgtgtgtggaccagtgcggttcggattcatcg
ctctacaacgtgtctgcgcagttcctgtgtgtgttgttttctgaagaggcaaagaagcga
gggacgagtgaagagaaatcagcttctctaactgctgctctgaattccgaatccggggag
aaactgtgtgaattactgctggagcgatatgataagactcagttccaggaccctcttaag
aaggtcacagctaaagtcctcatgcctctccttgcctgcagctccagcgctcaaagttac
gcctgcaaagcgggtcttatcgacagctgtgtggaacagatcaagcagatccactctcag
cttcacctggagtctgtaagaccaggcaaaaccacacacaggaagaaggacgagaacagc
atgaaggagctcaggatggtgctggagatcctgaggaattgtctgtatcaacataaagag
tgtaaagaagtagcaacggatttaaaactctcctctgtcttgttgtctctttggccgtgg
ctccttctgaatgactctggcatgattgcagcattagaactgctctgcgtatacacagcc
aactgcgctgcagcttgcagtgctgtatgtggtagttcagctcacgctgctttacctaga
aatcctgtgacgaactctctgatgcatgcagtgatgaagttggcgtcgcaggttcctcct
gataataacagcatccatgctctttctttctctctgctcgctaatttgtctatctccaga
gactgcagaggcctccttcagaagagcaacttcctacagcacttcctgtctctccctatg
cctcgggtgagcggtaaaagcagtaaaagcagcacagcagcagtgattctctctcagtgg
ctccagctgctgctgaacatctcttttgaggaagacggtcagcagatgatcatgaagatg
cggggagctctggagatgttgacggatttggctcagggcaaacacggagacaaaaaacac
acggcactgctcatcctccataacatctgcttctgctcagcgaataaacctcgagtcctc
gcctgtgataaagctgtagagctgctcgtgtcatgtttggagagcagctcattaaacgtc
cgtgctctcggagcttcagcactgtgggctttactgcacaactatcagaaggcaaaggtg
accctgaagtgtccctccatcagactgaaagtggacggagcatacgcactcactaagaaa
ggtgcagaaccaaaaatagaagagaacacaaacatatatttactgaaatgccttgaacat
ctcagccgtcttttaaacacataa
DBGET
integrated database retrieval system
