Pangasianodon hypophthalmus (striped catfish): 113541156
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Entry
113541156 CDS
T05759
Name
(RefSeq) elongation factor 1-alpha-like isoform X1
KO
K03231
elongation factor 1-alpha
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113541156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113541156
03016 Transfer RNA biogenesis [BR:
phyp03016
]
113541156
03012 Translation factors [BR:
phyp03012
]
113541156
04131 Membrane trafficking [BR:
phyp04131
]
113541156
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113541156
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
113541156
Transfer RNA biogenesis [BR:
phyp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
113541156
Translation factors [BR:
phyp03012
]
Eukaryotic type
Elongation factors
113541156
Membrane trafficking [BR:
phyp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
113541156
Exosome [BR:
phyp04147
]
Exosomal proteins
Proteins found in most exosomes
113541156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
113541156
NCBI-ProteinID:
XP_026793771
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MGKEKIHINLVIIGHVDSGKSTTTGHLVYKCGGVDPRTLEKYEKAAAQVGACMLMGKGSF
KYAWVFDKLKAERERGITIDISLLKFNTQKYVFTIIDAPGHRDFIKNMITGTSQADAALL
VVSAAKGEFEAGISRNGQTREHVLLAYTLGVKQLVVCVNKMDLTEPPFSQKRYEEVVKNV
TVFIKKIGYDPTAVPFVPLSGWGGDNMLAPSQKMSWFKGWKIKRKDGFSSGKTLLEVLDS
LYPPVRTANKPLRLPLQDVYKIGGVGTVPVGKIETGILKPGMVLTFSPAKLTAEVKSIEM
HHQGLQTALPGHNVGFNIKNVAVKNLRRGDVAGNAQQDPPSDVNSFIAQVIILNHPGKIK
SGYSPVLDCHTTHVTCSFAELQEKLDRHTGRKLEDLPPFLVSGDAATVKFVPIKPLCVES
FFSYPPLGRFAARDLKQTVAVGVIKTVEKVDQARKTAQKVQVVK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagagaaaatccacatcaatctggtcatcattggtcatgttgatagtgggaaa
tcaaccaccactggccatcttgtttataaatgtggtggtgttgacccaagaaccctggag
aaatatgagaaggctgcagcccaggttggtgcctgtatgttgatggggaagggttccttc
aagtatgcatgggtctttgacaaacttaaggcagaaagagagcgtggcatcaccattgat
atttccttgttgaagttcaacactcagaagtatgtgttcacaataattgatgcacctggt
caccgtgacttcattaagaacatgattacaggaacctcgcaggctgatgctgctctgctg
gttgtctctgcagcaaagggtgagtttgaggcaggtatatcccgcaatggtcagacaagg
gagcatgtcttgctagcctacacactaggagtcaagcagcttgtagtctgtgtcaacaaa
atggacctcactgagccaccgttcagccagaaacgttatgaggaggtagtgaaaaatgta
actgtttttatcaaaaagattggttatgacccaactgcagtgccctttgttcccctatct
ggttggggtggtgacaacatgcttgcaccttcccagaagatgtcttggtttaaaggatgg
aagatcaagaggaaggatggcttttcaagtggcaagacactgttggaagtgctggactcc
ttgtatccaccagttcgcactgccaacaaaccacttcgtctaccacttcaggatgtctat
aaaattggaggagttggcacagttcctgtgggcaaaattgaaactggaattctgaagcct
gggatggttctgaccttctcaccagctaagctgactgcagaggttaaatccattgagatg
catcaccaggggctgcagacagccctgcctgggcacaatgtgggcttcaacatcaagaat
gtggcagtcaagaacttgagacgtggagatgtagctggtaatgcccagcaagacccacca
tctgatgttaacagctttattgctcaggttattattctcaatcaccctggcaaaatcaaa
agtggctactctccagtgctagactgccatacaacccatgtcacatgtagctttgcagag
ctgcaggagaagcttgatcgtcacacagggaggaaactggaagacttgccgcctttcttg
gtctctggagatgctgccacagtcaaatttgttcctatcaaacccctctgtgtagaaagc
ttcttcagctatccacctttagggaggtttgctgcaagggacctgaagcagactgttgct
gttggggtgatcaagacagttgagaaggtggatcaagcaagaaagactgcacaaaaagtt
caagtagtaaaatga
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integrated database retrieval system
