Pangasianodon hypophthalmus (striped catfish): 113541161
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Entry
113541161 CDS
T05759
Symbol
pabpn1
Name
(RefSeq) polyadenylate-binding protein 2 isoform X1
KO
K14396
polyadenylate-binding protein 2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113541161 (pabpn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113541161 (pabpn1)
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113541161 (pabpn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
113541161
NCBI-ProteinID:
XP_026793781
LinkDB
All DBs
Position
Unknown
AA seq
279 aa
AA seq
DB search
MAEFGNGLAEESLLDSDPGHPELEDPGVGDEEPGLDEGEAAIEDPELEAIKARVREMEEE
AEKLKELQNEVEKQMNLSPPPAGPVIMSIEEKIEADGRSIYVGNVDYGATAEELEAHFHG
CGSVNRVTILCDKFTGHPKGFAYIEFADKESVRTAMALDESLFRGRQIKVGAKRTNRPGI
STTDRGFPRARFRSRGGSFSSRARYYSGYTPPRGRGRAFRFQDQWRLSTPPPPVAAAPPT
VSPSSLSLSAPSIPLSTLMWGGGGGAQGDPRPIYYNNKR
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggcggagttcggtaacggactggcggaggaatctctgctcgactcagaccccggtcat
ccggagctggaagatccgggtgttggtgacgaagagccgggtttagatgagggagaggcc
gctattgaagacccggagctggaggccattaaagcccgggtgagagagatggaggaggaa
gcagagaaactgaaggagctccagaacgaagtggagaaacagatgaaccttagtcctcct
cctgctggtcctgtcatcatgtccattgaagagaagatagaagcagatggaagatcaatt
tatgttggaaatgtggattatggagcaacagcagaggagcttgaagctcattttcatggc
tgtggctctgttaacagagtcactatcctgtgtgacaaattcacaggacacccgaaaggg
tttgcatatattgagtttgcagacaaggaatctgttagaacagcaatggcactggatgag
tccttattccgtggaaggcagataaaggttggggcaaagagaacgaatcgacccggtatc
agcaccacagaccgcgggtttcctcgggcccggttccgctcacgtggaggaagtttctcg
tctcgggctcggtattacagtggatacacaccacccagaggaagaggacgggccttcagg
tttcaggaccagtggaggctgagtactcctcctccccctgtggctgcagcgccccctaca
gtctcaccatcgtctctttctctctctgctccctctatccctctatccacactcatgtgg
gggggtgggggtggggcacagggtgacccccggcccatttactacaacaacaaacgctga
DBGET
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