Pangasianodon hypophthalmus (striped catfish): 113541241
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Entry
113541241 CDS
T05759
Symbol
gtf3a
Name
(RefSeq) transcription factor IIIA isoform X1
KO
K09191
general transcription factor IIIA
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113541241 (gtf3a)
03021 Transcription machinery [BR:
phyp03021
]
113541241 (gtf3a)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
113541241 (gtf3a)
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
113541241 (gtf3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
TFIIIA_zf-C2H2
zf-C2H2_4
zf-H2C2_2
Zap1_zf1
DUF7565
zf-AN1
GSCFA
zf_Hakai
C2H2_ASCIZ_4th
Motif
Other DBs
NCBI-GeneID:
113541241
NCBI-ProteinID:
XP_026793908
LinkDB
All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MGERFKDPTKSFLCSFANCKASFSKSWKLEAHYCKHTGLRPFACDNCDKSFCTRYQLTRH
NLSHSGKKPYQCIVDGCSEGFTSTAGLKNHVERVHQHKEKHYVCDYEGCLKEFHKNNQLK
SHKCEHMNQLPFECQYEGCGKKYATSKKLQKHEKVHDGYPCAEEGCAFQGRTWTEYQAHR
KAAHREALQCDSCTKVFHKAWFLKKHKLFVHLGVRRMFKCTKEGCPKTYTTRFNLQNHIL
SFHEGKRSFICPHDGCGKAFAMEESLKRHAVVHDPQKKKMQKKTKRGWKKLKPKTNVSNA
SELSAQLQNLSLNKSTSQNNP
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgggagaacgtttcaaagatccgactaagagcttcttgtgctccttcgccaactgtaag
gcttcattttccaagtcatggaagctggaagctcattactgcaaacacactgggctgaga
cctttcgcatgtgataactgtgataaaagtttttgcacccgctaccagctcaccaggcac
aatctgagccacagtgggaagaagccataccagtgtatagtggatggatgttcagagggc
tttaccagcactgcagggttaaagaaccatgttgaacgtgtgcaccagcacaaggagaag
cactatgtgtgtgactatgagggttgtctgaaagaatttcataagaataaccagctgaag
tctcacaaatgtgagcacatgaaccagttaccattcgaatgtcagtatgagggctgtggg
aagaagtacgctacctctaaaaagctgcaaaaacatgagaaagtgcatgatggttatccg
tgtgctgaagagggctgtgccttccagggaaggacgtggacggagtatcaggcacacagg
aaagcagcgcacagagaggctctgcagtgcgacagctgtacaaaggttttccataaagcc
tggtttctaaagaagcacaaactcttcgtccacttgggtgtacggcgtatgtttaagtgc
actaaggagggctgtccaaaaacctacaccacgcgtttcaacctccagaatcacattctt
tccttccatgagggcaaacgctccttcatctgccctcatgacggctgtgggaaagctttc
gccatggaggaaagtctgaagcgacatgctgtagtccatgaccctcagaagaaaaagatg
cagaagaagaccaaacgaggatggaagaagcttaaaccaaagacgaacgtgtcgaatgcc
tctgaactgtctgcacagctgcaaaatctctctctaaacaagtccacgtcccagaacaac
ccatga
DBGET
integrated database retrieval system
