Pangasianodon hypophthalmus (striped catfish): 113541261
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Entry
113541261 CDS
T05759
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K22372
E3 ISG15--protein ligase [EC:2.3.2.-]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113541261
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
113541261
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
113541261
NCBI-ProteinID:
XP_026793946
LinkDB
All DBs
Position
Unknown
AA seq
1997 aa
AA seq
DB search
MAKTAEGGLTISHVGYVMKIEGLGAVAAIACGQDHSLALCDSGQVFSWGAGGEGQLGHSS
PVAKCPKPVPVQIKLPFQIPVVQVACGDFHSLALTKGGEVFSWGQNKYGQLGLGKSVDLQ
PEPALVRFLVGVPVIQISAGGAHTLALALSAQVFCCGANSVGQLGLKRTDVKGRFAVCAV
PALRNLGVSSISCGAAHTAVLTKAGEVYTFGEGADGQLGHNSTNNELLPRKVEGIDGPAK
QVTCGSHHTLVLMPSGVLFTFGRDVHVQASGGTENSLQPVRLEGDWSNSGAGIHTEMKIS
SGWSSNFLFFPPSKTNILGEPIGKLKKAQVQRWVTMLESDKSIKEIKREISLTFATSSNL
VACFIKDSRNTPGTIQVDLNAASQTFDQLLKIAWIKNSINITHVVHIVFYAAPVMRCPEI
FLLLPTCSILHEQHNVIELVLPLAVAITKLHETAMKSLKEYLSSMDASIMTKHICMWKQA
LAFLLKSNVWLNYNPGVKAVLEVLKLLYRGNKRAERSRQVALTEFYIEEIGTSPQLLQRD
VTLWRQIKWGEVLEVEHTPAIFCRYPFLLDLKSKIIILNYVASITQMVHQFIHDDVAAGG
MFQEAYKWEVPTPILQLKLRRTALLEDTFRQLDNADHDNFKKTLVVQFVEDSKLTEVNKR
DFFLHAFDELLAPESRMFMRNDSKTMIWFPAKPAHDSKRYFLFGILCGLALYNNNIVHMP
FPLALFKKLVSVKPTLEDMNEFRPQVGKSLQYLLHDYKDDDAENMDITFRVHWDGADVEL
DSHEREKPVTSANKKEFVAAYVDYALNKSVEQVFNEFKRGFYKVCDEDVVNFFQPEELRG
VMVGTEEYDWDTFRQNTVYTGQYHVRHPSIIAFWEVFEELTEKQKKAFLLFLTGCDRVPI
LGMDQVRMTVLDRPNFTQDHLPESLTCHSYFMLPPYENKQRLEAKLIEAIDHNQGFWIEN
PTSESRASFTQQRLCSIIMLFCWGASSGGQLAFPGTGGKDIATPTSVNFNEQLVQISCGE
QHTLFLTGSGQVLSCGRNSKGQLGRSKSRDTKLPVKIEGLGAVAAIACGQDHSLALCDSG
QVFSWGAGGEGQLGHSSPVAKCPKPVPFPIQLPFQIPVVQVACGNFHSLALTKGGEVFSW
GQNKYGQLGLGKSVDLQPEPALVRFLVGVPVIQISAGGAHTLALALSAQVFCCGANSVGQ
LGLKRTDVKGRFAVCAVPALRNLGVSSISCGAAHTAVLTKAGEVYTFGEGADGQLGHNST
NNELLPRKVVGIDGPAKQVTCGSHHTLVLMPSGVLFTFGRDVQVQASGGTENSLQPVRLE
GDWSNSGAGIHTEMKISSGYSSNFLFFPHSKTNILGEPVGKLEEAQVQRWVTTLECERSI
KEIKREIFLTFATSSNLVACFIKDSRNTPGTIQVDLNAASQTFDQLLQIPWIKNSMNITH
VVHKLLDAAKVMRCPEIFLLLPTCSILHEQLNVIELVLPLAVAITDLNETAMKSLKEYLS
SMDPNIMTKHIRMWKQALAFLLKSNLWVNYNPGVKAVLEVLKLLYRGNKRAEKSKKVPLS
EFYIEEIGTTPQLLEQDIMLWMYIKSELVKEVDQTSAIFCRYPFLLDLPSKISIFKYIAN
VTQLVHQFVHIDVVSGGFFREMCNWEVPTPILQLKVRRTALLEDTFRQLNNADHDNLKKT
LVVQFVEDSKLTEVNKRDFFLHTFNELLAPKSGMFMYNDRQTMIWFPAKPTLELKQYFLF
GILCGLALYNNNIVHMPFPLALFKKLVNVKPTLEDMIEFNPVIGKSLHCILHDYSDDVVD
DLNIPFCVHWDGADVELESHEKGESVTSDNKKEFVVAYVDYALNKSVEQVFNEFKRGFYK
VCDEDVVNFFQPEELRGVMVGTEEYDWDTFKQNTAYVGQYHERHPTIIAFWEVFEELTHE
QKKAFLLFLTGCDRVPILGMDQVRMTVLDRPNFTQDHLPESLTCHSYFMLPPYENKQRLE
AKLIEAIDHNRGFWIED
NT seq
5994 nt
NT seq
+upstream
nt +downstream
nt
atggctaagactgcagagggtgggctcactatctcacacgtcggttacgtcatgaagatt
gaaggattgggagctgtagctgcaatagcatgtggacaggaccacagtttggctctgtgt
gattcaggtcaagtgttttcctggggagcgggtggagaaggtcagctgggccacagcagc
ccggtggcaaaatgtcccaaaccagtgccagttcagataaaattacccttccagatccca
gtagtgcaggtggcttgtggtgatttccattctttggccctaaccaagggaggtgaagtc
ttttcatggggtcagaataaatatgggcagctgggactggggaaatcagtggacctgcag
cctgaacctgctctggtccgatttcttgtcggagttccagtcattcagatctctgctggt
ggagctcacaccctggccctggctctctcagctcaagtgttctgctgtggagctaacagt
gttggacagctgggccttaaaaggactgatgtaaaaggccgatttgcagtatgtgcagtt
ccagctttgaggaacttgggggtttcttccatcagctgtggagcagctcacactgctgtc
cttactaaggctggagaggtgtacacattcggagagggagctgatggtcaacttgggcac
aactccaccaataacgagcttctaccccggaaagttgaaggcattgatggacctgctaaa
caagtaacctgtggcagccaccacactctggttctgatgccgtctggtgtcctcttcaca
tttggccgtgacgtccacgttcaggcgagtggtggcactgagaacagcctgcagccggta
agactggaaggagactggagcaactcaggagcagggatacacacagaaatgaagatatca
tctggctggagttccaactttcttttctttccaccttccaagaccaatattcttggagag
ccaattggaaaacttaaaaaggcccaagtgcagagatgggttacaatgttggagagtgat
aaaagcatcaaagaaatcaaaagggagatttccttgacttttgctacaagttcaaatctc
gtcgcctgcttcattaaggacagtagaaatactccaggtactattcaggttgatttgaat
gctgctagccagacctttgaccagctcctgaagattgcttggatcaagaattcaataaac
atcacacatgttgtgcacatcgttttttatgctgctccggtgatgaggtgtcctgaaatc
ttcctgcttctgcccacatgctccattcttcacgaacaacacaatgtcattgaactggtg
ctgccgttagctgtagccatcacaaaactccatgagactgccatgaaaagcttgaaggag
tacttgtcctccatggatgccagcattatgaccaagcacatctgtatgtggaaacaagca
cttgccttcctcttgaagtccaatgtgtggttaaactataaccctggtgtgaaagcagtg
ctggaagtcctcaagttactttacaggggaaacaaaagagctgaaagatcgaggcaggtt
gcgctcactgagttctacatagaggagataggcacctcgcctcagttacttcaacgggac
gtcacgctgtggaggcagattaaatggggagaagttctggaagtggaacatacacctgct
atcttctgtcgttacccatttcttttggatctgaagagcaaaatcatcattttaaactat
gttgcatccataacacagatggttcatcagttcatccacgatgatgtggcagctggaggg
atgtttcaggaggcatataaatgggaggtcccgacacccattctccagctgaaactgaga
cgcactgccttgctcgaggacacattcagacaacttgacaatgccgaccatgacaacttc
aaaaaaacattagtggtgcagtttgtagaagactccaaactgactgaagtgaacaaaagg
gatttcttcctccatgcttttgatgagcttttggctcctgaatcaaggatgttcatgaga
aatgacagcaaaacaatgatctggttccctgccaagccagcacatgactcaaagcggtac
ttcctgtttgggatcctctgcggcctggccctctacaataacaacatagtgcatatgccc
tttcctctggccttgtttaagaagctggtcagtgtaaagcccactctggaggatatgaat
gagttcaggccacaagttggcaagagtttgcaataccttttacatgactacaaagatgac
gatgctgagaacatggacatcactttccgtgtgcactgggatggtgcagatgtggagctg
gattctcacgaaagagaaaaacctgtgacaagtgctaacaagaaggagtttgtggcggca
tatgtggattacgcactgaacaagtcagtggagcaggtgtttaatgagtttaagagggga
ttctacaaagtgtgtgatgaagatgtggtgaacttcttccagccggaggagctcagagga
gtgatggtgggcacagaggaatacgactgggacactttcagacagaatacagtatatact
gggcagtaccacgtgagacacccctctatcattgctttctgggaggtatttgaggagctg
acggagaagcaaaagaaagcctttctcttgtttctgacaggctgtgatcgtgtacccatc
cttgggatggaccaggttaggatgactgtgttggaccgtcctaacttcacccaggaccac
ctcccggagtccctcacctgccactcttatttcatgctccctccatatgagaacaagcag
cgtctggaggcaaagcttattgaagcaatagaccacaaccaaggcttttggatagaaaat
ccaacaagtgaatctagagcttcattcacacagcagcgtctctgcagcatcatcatgttg
ttctgctggggagcttcatccggaggacagctcgcttttcccggcactggagggaaagac
atcgccacaccgacttcagtaaactttaatgaacaactcgttcagatatcttgtggagag
cagcacactttattcctgacaggaagcggtcaggtgctgtcctgtggccgaaactctaaa
ggacagctgggacgatccaagagcagagacaccaaactgccagtgaagattgaaggattg
ggagctgtagctgcaatagcatgtggacaggaccacagtttggctctgtgtgattcaggt
caagtgttttcctggggagcgggtggagaaggtcagctgggccacagcagcccagtggca
aaatgtcccaaaccagtaccattcccgatacagttacccttccagatcccagtagtgcag
gtggcttgtggaaatttccattctttggccctaacaaaaggaggtgaagtcttttcatgg
ggtcagaataaatatgggcagctgggactggggaaatcagtggacctgcagcctgaacct
gctctggtccgatttcttgtcggagttccagtcattcagatctctgctggtggagctcac
accctggccctggctctctcagctcaagtgttctgctgtggagctaacagtgtcggacag
ctgggccttaaaaggactgatgtaaaaggccgatttgcagtatgtgcagttccagctttg
aggaacttgggggtttcttccatcagctgtggagcagctcacactgctgtccttactaag
gctggagaggtgtacacattcggagagggagctgatggtcaacttgggcacaactccacc
aataacgagcttctaccccggaaagttgtaggcattgatggacctgctaaacaagtaacc
tgtggcagccaccacactctggttctgatgccgtctggtgtcctcttcacatttggccgt
gatgtccaagttcaggcgagtggtggcactgagaacagcctgcagccggtaagactggaa
ggagactggagcaactcaggagcagggatacacacagaaatgaagatatcatctggctac
agttctaactttcttttctttccacattccaagaccaatattcttggagagccagttgga
aaacttgaagaggcccaagtgcagagatgggttacaacattggagtgtgaaagaagcatc
aaagaaatcaaaagggagattttcttgacttttgccacaagttcaaatcttgtcgcctgc
ttcattaaggacagtagaaatactccaggtactattcaggttgacttgaatgccgctagc
cagacgtttgaccagctcctgcagattccctggatcaagaactcaatgaacatcacacat
gttgtacacaaacttttggatgctgctaaagtgatgaggtgtcctgagatcttcctgctt
ctgcccacgtgctccattcttcatgaacagctcaatgtcattgaactggtgctgccgtta
gctgtagccatcacagacctcaatgagactgccatgaaaagcctgaaggagtatttgtcc
tccatggatcccaacattatgacaaagcacatccgcatgtggaaacaagcacttgccttc
ctcttgaagtccaatctgtgggtaaattataaccctggtgtgaaagcagtgctggaagtc
ctcaagttactttacaggggaaacaaaagggcggagaagtcaaagaaggttccactcagt
gagttctacatagaagagatcggcaccacacctcagttactcgaacaggatattatgctg
tggatgtacattaagtctgaactagttaaggaagtggatcagacgtctgccattttctgc
cgttacccatttctcctggacctgccaagcaaaatcagcattttcaaatacattgctaat
gttacccagttggttcatcagtttgtccacattgacgtggtgtctggcggattctttcgg
gagatgtgcaattgggaggtcccgacaccgatcctccagctgaaagtgagacgcactgcc
ctgcttgaggacacattcagacaacttaataatgctgaccatgacaacttaaaaaaaact
ctagtggtgcagtttgtagaagactccaaactgacagaagttaacaaacgggattttttc
ctccatacgtttaatgagcttctggcccctaaatcagggatgttcatgtacaatgacagg
cagacaatgatctggttccctgccaagccaacgcttgaattaaaacagtacttcctgttc
gggatcctctgcggcctggccctctacaacaacaacatagtgcatatgccctttcctctt
gccttgtttaagaagctggtcaatgtaaagcccactctggaggatatgattgagttcaac
cctgtgattggaaagagtttgcattgtatccttcatgactactctgatgatgttgttgat
gacttgaacatccctttctgtgtgcactgggatggtgctgatgtggagctggagtcccac
gaaaaaggagaatcagtgacaagtgataacaagaaggagtttgtggtggcatatgtagat
tacgcactgaacaagtcagtggagcaggtgtttaatgagtttaagaggggattctacaaa
gtgtgtgatgaagatgtggtgaacttcttccagccggaggagctcagaggagtgatggtg
ggcacagaggaatacgactgggatacattcaaacagaatacagcatatgttggacagtac
catgagagacaccctactatcattgctttctgggaggtatttgaggagctgacgcatgag
caaaagaaagcctttctcttgtttctgacaggctgtgatcgcgtacccatccttgggatg
gaccaggttaggatgactgtgttggatcgtcctaacttcacccaggaccacctcccggag
tccctcacctgccactcttatttcatgctccctccatatgagaacaagcagcgtttggag
gcaaagcttattgaagcaatagaccacaaccgaggcttttggatagaagactga
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