Pangasianodon hypophthalmus (striped catfish): 113541402
Help
Entry
113541402 CDS
T05759
Symbol
dctn1
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04814
Motor proteins
phyp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
113541402 (dctn1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113541402 (dctn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113541402 (dctn1)
03036 Chromosome and associated proteins [BR:
phyp03036
]
113541402 (dctn1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113541402 (dctn1)
Membrane trafficking [BR:
phyp04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
113541402 (dctn1)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
113541402 (dctn1)
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
113541402 (dctn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
DUF4407
Spike_torovirin
Motif
Other DBs
NCBI-GeneID:
113541402
NCBI-ProteinID:
XP_026794153
LinkDB
All DBs
Position
Unknown
AA seq
1271 aa
AA seq
DB search
MSQMKRNTYSRVSDKQTTSSGSSRMSSDGGGRPVKVGSVVEVIGKGHRGTVAYIGNTLFA
SGKWVGVILEEARGKNDGTVQGKRYFTCVENHGIFVRQSQIQLVEDGADTTSPDTPEAAT
SKVPKREILEVPKSNKVRGTKPKKTPAPRKTTARRPKARSGVGVKVGSGSASAGEMSSSE
PSTPAQTPLAAPVIPSPVGTLPSPGAPPIPAPSKEEEALRAQVKDLDEKLETLRMKRAED
KAKLKELEKHKIQLEQLQEWKSKMQEQQNELQKQLKEAKKEAKDALEAKEHYMEEMADTA
DAIEMATLDKEMAEERVESLQQEVDALKEKVDELTMDLEILKHEIEEKGSDGAASSYHVK
QLEEQNARLKEALVRMRDLSASEKQEHAKLQKQMEKKNFELETVRVQKEKMQEEMKMAEK
TIDELKEQVDAALGAEEMVETLTERNLDLEEKVRELREAVTDLEAINEMNDELQENARET
ELELREQLDLSAASVREAEKRVEAAQETVADYQHTIQKYRELTAHLQEVNRELMSQQEAT
AEPQQQPAEIFDFKIKFAETKAYAKAIEMELRKMEVAQANRQVALLTSFMPDSFLRHGGD
HDGILVLLLIPRLICKAELISKQAQEKFDLTENCSQRPGMRGAVGEQLSFAAGLIYSLSL
LQATLHKYEYALNQCNVEVYKRVGSLYSEMCVHERSLDILIDLLHKDQLDETVNVEPLTK
AIKYYQHLYSIHLAEEAENCTMQLADHIKFTQSALDCMAVEVGRLRAFLQTGEEETLFSV
LLKDLDTSCSDIRQFCKKIRRRMPGTDAPGIPAALNFGPQVSETLAESRRQLAWVNAVLQ
EVAAAGAQLIAPLGEHEGLPTLKLEDMAFKAAEQIYGSQGINLYECLRQSCSVVIATMNK
MATAMQEGEYDSEKPQTGMAPVEVRAAALRAEITDAEGLGLKLEDRETVIKELKKSLKIK
GEELSEANVRLSLLEKKLDSASKDADERVEKIQTILDETQALLKKKEKEFEETMDALQAD
IDQLEAEKTELRQRINSQSKMTIEGLRGNPASGIASIVTGGITTEDQKGAVGVCAAGGVQ
VIDSPLLTQQIETQRLSIKRLKNENNILKAEKMRAQLASLPPLNVSKLSWREGCRPEVLS
SALYRKTDQLFETLLQMSANVKVVDITGKSPVSPSAQLLEQTARLQSLSETLDRLKDEVA
EHVVSQRPGARVSSDFATFPCTSFVKAKEEKTRDEVLVGRVMVPCARGQEQVHRLVLSQH
QLQSVHRLLQT
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaatgaagaggaacacttatagcagggtgagtgacaaacagaccactagcagt
ggcagcagcaggatgagttcagatggaggaggacggccagtgaaggtgggctctgtggtg
gaggtcattggaaagggtcatcgtggcactgtggcctacatcggcaatacgctcttcgcc
tcagggaaatgggtgggagtcatcctggaagaggccagaggcaagaacgatggcacagtg
caaggcaagcgctacttcacctgcgttgagaaccatgggatatttgtgcggcagtcacag
atccagttggtggaggatggagcagacacaacatcgcctgacactcctgaagctgccaca
tctaaagtgcctaagcgagagattctggaggttcccaagtccaataaagtgcgaggaacc
aaacccaaaaagacgcctgctcctcgtaagactacggccaggaggccaaaggcgcggtcg
ggtgttggagtaaaggtgggttctggctcagcttcggctggagagatgagcagtagtgaa
cccagcacacctgctcaaaccccactggctgctccggttatcccctcccctgttgggact
ctcccctcccctggagctccacccatcccagccccgagtaaggaggaggaagctctacgg
gcgcaggtgaaagatctggatgagaagctggagactctgcggatgaagcgggcggaggat
aaggccaagctaaaggagctggagaagcacaagatccagctggagcagctacaggagtgg
aagagcaagatgcaggagcagcaaaatgagctgcagaaacaactcaaagaggccaaaaag
gaagcaaaagacgctttagaagcaaaggaacattatatggaggagatggcagacacagca
gatgctattgagatggccaccttagataaagagatggctgaagagagggtggagtctctg
cagcaggaggttgacgcactcaaagagaaggtggatgaactgaccatggacctggagatc
ctcaaacatgagatagaggagaaaggctctgatggtgcagcatctagttatcatgtgaaa
caactggaagaacaaaatgcccgtctgaaggaggccttggtcaggatgcgtgacctgtct
gcctctgagaaacaggagcacgcaaagctgcagaagcagatggagaagaagaactttgag
ctggagacagtgagggtgcagaaagagaaaatgcaagaggaaatgaagatggcagagaag
accatagatgagctcaaagagcaggtggatgcagctcttggagcagaagagatggtggag
actctaactgagcggaatctggacctggaagagaaagtgcgggagctcagagaggccgtt
actgacctggaggccattaatgagatgaatgatgagctgcaggagaacgccagagagacg
gagctggagctgagggagcagctggatctgagtgcagccagtgtgcgagaggcagagaaa
cgtgtggaagcggcgcaagagactgtggcagattaccaacacaccatccagaaatacaga
gaactgaccgcacacctgcaggaagtgaacagagagctgatgagccaacaggaggccact
gctgagccgcagcagcagcctgccgagatcttcgacttcaagatcaagtttgcagaaacc
aaagcatacgcaaaggccattgagatggagctgcgtaagatggaagtggctcaggcgaac
agacaggtggctcttctcacctccttcatgcccgactccttcctgagacacggaggggac
catgacggcatcctcgtcttgctgctcattcccagactcatctgcaaggcagagctgatc
agtaagcaggcacaggagaagtttgatctaactgaaaactgctctcagagaccggggatg
agaggggcagtgggagagcagctcagctttgctgctggacttatttactctctgagtctg
cttcaggcaacactgcacaaatatgagtatgcccttaatcagtgtaatgtggaggtatat
aagcgtgtgggttccctttactctgagatgtgtgtgcatgagcgttctttggacatcctc
atcgatttgctgcacaaggatcaactggatgaaactgtgaacgtggagccacttactaag
gccattaaatattatcagcacctttatagcattcatctagctgaagaggcggagaactgc
accatgcagttggctgaccatataaaatttacccagagtgctctggactgcatggcggtg
gaggtgggtcgtctgcgtgccttcctgcagacgggagaggaagaaacactgttttctgtg
ctgctcaaagatctggacacttcttgtagcgacattcgccagttctgcaagaagatccgc
cgccgcatgccgggcactgatgcgccaggcatccctgctgctctcaactttgggccacag
gtgagtgagacgctggcagaaagcaggaggcagctggcctgggtgaatgctgtgctgcag
gaggtggctgcagcaggagctcagctcattgcaccacttggtgaacatgagggtctgcca
acgcttaaactggaggacatggccttcaaagcagctgaacagatctacggctcccagggt
ataaacctctatgagtgtctgcgccagtcctgtagcgtcgtcatcgcaaccatgaataag
atggccaccgctatgcaggagggagagtacgactctgagaagccacagactgggatggct
ccagtggaggtgcgagcagctgcactgagggcagagatcacagatgctgaggggctcggg
ctaaaattggaagacagagagactgtcatcaaagagctcaagaaatccctcaaaataaag
ggtgaggagctgagtgaggccaatgtgcgcctgagtcttctagagaagaagctggacagt
gcgtcaaaggacgcagacgaacgagtggagaaaatccagaccattctggatgagacccag
gcactcctaaagaagaaggagaaggaatttgaagagaccatggatgctctgcaggctgac
atagaccaactggaggcagagaagacagagctgagacagaggattaacagccaatcaaag
atgaccattgagggactcagaggaaatcctgcctctggcattgcatccattgtgactggt
ggcatcacaactgaggatcagaaaggtgctgtaggagtgtgcgctgcaggaggtgtgcag
gtgatagattctccactgctgacacaacagattgaaactcagagactcagcataaagcgc
ttgaagaatgaaaacaacatcctgaaggcggagaagatgcgtgctcagttagcctcgctt
cctccactgaacgtgtctaagctgagctggcgtgagggttgcagaccggaggtcctatcc
agcgctctctatcgcaaaacagaccaactctttgaaacactgctgcagatgagtgccaac
gtcaaagtcgtagacatcactggaaaatctccagtgagtcccagtgcccagctcctggag
cagactgcaaggctacagtctctcagtgagactctcgacaggctaaaggatgaagtggca
gagcatgtggtgtctcagagacctggtgctcgggtttcgtctgactttgctactttcccc
tgcacctcattcgtaaaggctaaggaggagaagacgagagatgaagtgttggttggtcgt
gtgatggtgccttgtgctcgagggcaggagcaggttcaccggcttgtgctgtcccagcac
cagctgcagagtgtgcatcgcctgcttcagacttaa
DBGET
integrated database retrieval system
