Pangasianodon hypophthalmus (striped catfish): 113541412
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Entry
113541412 CDS
T05759
Symbol
bbs1
Name
(RefSeq) Bardet-Biedl syndrome 1 protein
KO
K16746
Bardet-Biedl syndrome 1 protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
phyp03037
]
113541412 (bbs1)
Cilium and associated proteins [BR:
phyp03037
]
Primary cilia and associated proteins
BBSome
113541412 (bbs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BBS1
BBS2_Mid
Beta-prop_BBS7
PHTB1_N
Motif
Other DBs
NCBI-GeneID:
113541412
NCBI-ProteinID:
XP_026794165
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MSSVPMEMKDSAVSSSKWLDAHYDPVANLYTFSSCITLADLHGDGENKLVVGDLGTGAGN
MKLKVYCGTGLLSENTLLDLPTGLVSFLMDQHEPRTPAIAVASGPFIYIYKNLRPYFKFT
LPTLEVNPLEQDVWNQARGDMIDPMTLKEMLEGIRDKADIPLSVRSLRFLMLEPQEMESY
VNLHKEQPIRRQTVITCIGTLKKNMADDDAVSCLVIGTESQDIYILDPEAFTILSKMSLP
SVPTLMDVTGQFDVEFRIIVACRNGNIYVLRRDSQKPKYCIELSSHPVGLVRMGKNVVVG
CAEETMQSFTQKGKKLWTTYLPAPVTTMALLDLPTRGFQAILVALANCEVHVYRDKNVVS
TIKTQDVVTSICFGRYGREDGTLIMTTKGGGLIVKILKRTAVFDDKDSISGPPIAQSIRL
NVPKKTKLYVDQTMRERENAVAMHRAFQMDLSRLRLAAARAYVKALESSLTPMSTSLTEP
LKMNAVVSVNMFMVTFCQLPVNTP
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcagttcctatggagatgaaagacagtgcagtgtccagttccaaatggcttgat
gcacactatgatccagttgccaatttatatacgttttcttcatgcatcactctggcagac
ttgcatggagatggtgaaaacaagctggtggtgggtgatctgggtacaggagcaggcaac
atgaagctgaaggtgtattgtggcactgggctgctcagtgagaacaccctgttggacttg
cccaccggtctggtgtccttcctcatggaccaacatgagcctcgcacccccgccatcgct
gtggcctcaggccctttcatctacatctacaagaacctacggccctatttcaagttcact
ctgcccactctggaggtcaaccccctggagcaggatgtatggaatcaggctagaggggac
atgattgacccaatgacactaaaagaaatgttagagggcataagagataaggctgacatc
ccactatcagtgagatcgttacggttcctcatgcttgaaccacaggaaatggagtcttac
gttaaccttcacaaagagcagcccatacgcagacagacggtcattacatgcatagggaca
ctgaagaaaaacatggcggatgatgatgcagtcagctgtctggttatcggcacagaaagt
caggatatttatatcttggacccggaagcctttactattctctcaaagatgtcccttccc
agtgtccctacactcatggatgtgactggtcagtttgacgtagagttcagaatcattgta
gcctgtcgtaatgggaacatctatgtactgcgcagggactcgcagaagcccaagtactgc
attgagctgtcctctcaccctgttggactggtcaggatgggaaagaatgtggtggtgggc
tgtgctgaggagactatgcagagtttcactcagaaggggaagaagctgtggacgacttac
ctgcctgctccagtcaccactatggcccttctggacttgcccacacggggcttccaggcc
atactggtggccctggccaactgtgaggtccatgtgtaccgggacaagaacgtagtcagc
accatcaaaacacaggacgtggtgaccagcatttgttttggacgttatggtcgtgaagac
ggcaccctaatcatgaccaccaaaggagggggtctgatcgttaagatcctgaagaggaca
gctgtgtttgatgacaaggactccatctctggtcccccaatagctcagagcattcgacta
aatgtgcccaagaaaaccaagctttatgtggaccagaccatgagagaaagggagaatgct
gtggccatgcacagagccttccaaatggacctgagcaggctgcggctagctgcagccagg
gcctacgtcaaagccctggagtccagcctcactcccatgtcaaccagcttgacagaacct
ctaaagatgaatgcagtggtgagtgtaaacatgttcatggtgacattttgccagttacca
gttaatacaccttaa
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