Pangasianodon hypophthalmus (striped catfish): 113541419
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Entry
113541419 CDS
T05759
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113541419
Ion channels [BR:
phyp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113541419
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
113541419
NCBI-ProteinID:
XP_026794174
LinkDB
All DBs
Position
Unknown
AA seq
926 aa
AA seq
DB search
MEHLTPEQWREIVNKKMRFPPELISAIHEGNVSVIRSLLKTGDGIIRQLEDSEDRQWREA
LNLSIRLGNEDAMVTLLHGVKFDFRQIHEALLVAVDTNQPRIVKRLLDRLDQEKGNKMDV
HSFNQAIFDHSIDDSHFAPGVTPLTLACQKDLYEIVTMLTQKGHVIPWPHKVSCTCLECR
NGRQYDLLKFSLSRINTYRGLASRAYLSITAEDAMLSAFYLSRDLRKLSKREPEFKPQYL
ALEELCQEFAVELLGMCRNQSEVTTILNSCGFEDPNSRDELDKHSFEEGIPNLARLRLAV
NYNQKQFVAHPICQQVLSSIWSGNLSGWRGSRTAWKLLVSLGIFITMPFLCLIYWIAPKS
KVGKILKIPVIKFILHSASYLWFLITLLAESIIMEMFRDVSSTRHQTILHNSIHMVWVAG
FFWFECKEVWIEGLRSYFLDLWNFLDMMVLSMYLASFSLRVVILVKGYILCQSPENAEDC
FYFTQSARADWHQEDPQLIAEVLFAVTSMLSFTRLAYILPAQESLGTLQISMGKMIDDMI
RFLFILMIIGTAFLCGINNIYVSYVNSNYLGRFNETFQFLFWTMFGVVNKEYVDMPDYVL
AEFVGRILYGIFTLLIVIVLLNMFIAMITNSYQKIEDDADVEWKFARSKLYLSYFREGLT
MPVPFNIIPSPKAFFYLVRKLCCCCNFNSTPDYPPISSVQSIETDEKVSYRNQVIRALVQ
RYIESARREFEETKRKDVGNRVTELSKVVGHLHSEMKQIHQTLLDIEDNRDPSGRSTSSI
LGKYIQGAKNNFRDFNVMPSESKSAPLLANVHHPKSEDVGDVNGGEIKDTAETVEGKIEE
EGAGDEIREQESKDQTGDGDKVEEDGASDEIREEESNDQAVVEDETTKMEEGRANEGKEE
SLTGSSASQDTGFGSEESELSASSPE
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggagcacctcacgccagagcaatggcgcgagattgtgaacaaaaagatgcgctttccc
ccggagctcatcagcgccattcacgagggcaacgtgtctgtaatccgtagcctgctgaag
actggcgatggcatcatccgccagctggaagactcagaagacaggcagtggagagaagcg
ctgaacctgtccatccgcttgggcaatgaggacgccatggttactctgctacatggagtc
aagtttgatttccgacagatccatgaggctcttttggtggctgtcgacactaaccagcca
cgtattgtgaagcgcctcctcgaccggctcgatcaagagaagggcaacaagatggatgtg
cactctttcaaccaggccatttttgaccattccattgatgactctcattttgcccccggg
gtgacgcccttgacgctggcctgccagaaggatctatatgaaattgtgaccatgctcaca
cagaagggccatgtcatcccatggcctcacaaggtctcctgtacttgtcttgagtgccgg
aatgggcgccagtatgacttgctcaagttctcactgtcacgcattaacacctaccgtggc
cttgccagccgggcatacttgtccatcactgctgaggatgccatgttgagtgctttttat
ctaagccgggaccttcgcaaactctccaagagggagccggagtttaagccgcagtacctt
gcactcgaggagctgtgtcaggagtttgccgtggaattgctgggaatgtgccggaatcag
agtgaggtcacaaccattctcaacagttgtgggtttgaagatcccaacagtcgagatgag
ctggataagcactcgttcgaagagggcataccaaacctggcccgattacgactcgctgtg
aactacaaccagaaacagttcgtagcccacccaatttgccagcaggttctttcatccatc
tggtctggaaacctatctggctggagaggcagcaggacggcctggaaactcctggtgtct
ctggggatctttatcaccatgcctttcctctgcctcatctactggattgcaccaaagtca
aaggtgggaaagattttgaaaattccagtgatcaaattcatccttcactctgcctcctac
ttgtggttcctcatcacactgttagcggaatccattatcatggagatgtttcgtgacgtg
tcttcaaccaggcaccagaccatattgcacaactctatccacatggtgtgggtggctggg
tttttctggtttgagtgtaaggaggtctggatcgagggcctgaggagctacttcctggac
ttgtggaattttctggatatgatggtgctcagcatgtatctggcctctttttccctgcga
gtggtcattctggttaaaggctatattctgtgccagtcaccagaaaatgcagaggactgt
ttctactttacccaatctgcacgtgcagactggcatcaggaggatcctcagctaatagct
gaagtgctctttgccgttaccagcatgctgagtttcacacgtttggcctacatcctgcct
gcacaagagtctctgggaactctgcagatctctatgggaaagatgattgatgatatgata
aggttcttgtttatattgatgatcattggtacagcctttttgtgtggcatcaacaatatc
tatgtttcttacgtcaactctaattaccttggaaggtttaatgagaccttccagttcctg
ttctggacaatgtttggtgttgtcaataaggaatatgtggatatgcctgattatgttttg
gctgagtttgtgggcagaatcctgtatgggatcttcacactactgatcgtcattgtgcta
ctgaacatgttcattgctatgatcacaaactcttatcagaagattgaggatgatgcggat
gtggagtggaaatttgctcgctccaaactctacctgagctacttcagggagggactcacg
atgcctgtccccttcaacatcattccctcaccaaaagctttcttctacctcgtacgaaag
ctctgctgctgttgtaactttaattcgaccccggactatccacccatcagctctgtgcag
tctattgagacagatgagaaggtgtcatacagaaatcaggtgatccgggctttagtgcag
cgctatattgaatctgccaggagagagtttgaagagacgaagcgcaaagatgttggaaac
cgggtcacagagctgagtaaagtggttggacacctgcacagcgagatgaagcaaattcac
cagacgctgttagacatagaggacaaccgggatccttcaggacgaagcacttcctccatc
ttagggaagtacatacagggtgccaaaaacaacttccgcgactttaacgtcatgccatca
gaaagcaaaagtgcccctttactggccaacgtccaccatccgaaatctgaagatgtaggc
gatgtgaacggaggggagataaaagacacggctgagactgttgaaggtaagatagaggag
gagggagcaggtgatgagatcagggaacaggagagtaaagatcagactggtgatggagac
aaggtagaggaggacggagccagtgatgagatcagggaagaggagagtaatgatcaggct
gtggttgaagatgaaacaacgaagatggaggaggggagagccaatgaaggaaaagaagaa
tctctcaccggcagcagtgcctctcaggacaccgggtttggttctgaagaatcagagctc
tccgctagcagtcctgagtaa
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