Pangasianodon hypophthalmus (striped catfish): 113541479
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Entry
113541479 CDS
T05759
Name
(RefSeq) ras and Rab interactor 1-like
KO
K17638
Ras and Rab interactor 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113541479
Membrane trafficking [BR:
phyp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
113541479
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Paralog
GFIT
Motif
Pfam:
RIN1
VPS9
SH2
SH2_1
Motif
Other DBs
NCBI-GeneID:
113541479
NCBI-ProteinID:
XP_026794253
LinkDB
All DBs
Position
Unknown
AA seq
819 aa
AA seq
DB search
MQEDHVYDYPDAHPVGEKRTCPQRGSLKSISVLDRLLLTYPVWLQLSINSATALHILQRE
PPGTFLVRKSSTSQKKMLCLRLADDSVPSFVKQFVIREKDSTFSLESSAISFPDLCRLIA
FYCVSRDVLPFTLELPEAIAKASSHKQLESISHMGVEFWSSQLNFRGPRNGPPPVPDAPV
LPNPKPQHSTASTSTSTTLFQEFCPIHTRSPSELDLGAGQGALCFINPLFLQEHPIRGAM
HKRHHFKRSIKVRVSTENSSSLSPPVTPPPPPPLLAKAKCKGKNVQQNEVVQSNEEDKNN
AEVVEGDSDYVQPCLALPKKTSALVTTTLSPTAEEEDYQLPKALLQAQRKITVESEEENE
DEDIGLVLEKRKAPSLTELDSSSSLSSLDETEESPQKPSLTRGTSNPIIPSPHPPHQSVS
ALRKMSAAFVSFFVPGKRVIRLVEDLSHDRRMAFGALVQDFLREQREVLKPQCLTTTVEL
LQGLRLFINQAKVFLLECGELEPPIETLVPEDEKDQTLEKALFRCVLKPLKGQIDTALYN
VREHDGSFKRLAESMKTARDASPRDLFGVQVAVPDAHGIEKIKHKMSLMRRAYSPIDKVV
LLLQICKLIYKAMKTNTGQEFGADDFLPALSYVIVQCNMPELSLEVEYMMELLETSWLTG
EGGYYLTSVYASLSYIQSEPEAVPSSGLTHQVKESLKEWSHRRSTESKSQNAIKQRFVKV
LFQDGECSLVKTLQWKAGFSGEALAQLCAIKFGVDQPDEYGLYWRSSGKLIPVSLEDQIQ
DLQNVGTSSAPLIYQHSNQDMKSSRLTRGGALDLSGEAS
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaggaccatgtgtatgactatccagatgcccatccagtaggagagaagaggaca
tgtcctcaacgaggctccttgaagagcatcagtgtgctggaccgcctgctgctcacgtac
cccgtatggctgcagttgtctatcaactcagccacagcactccacatcctacagcgtgaa
cccccagggactttcctggtgcgaaagtccagtacatcccagaagaaaatgctgtgtctc
aggctagcagatgacagtgtgccatcttttgtcaaacagtttgtcatccgggagaaggac
tcaaccttctctttggagagctcagctataagtttcccagatctttgtagactcattgcc
ttctactgtgtcagccgggatgttcttcccttcactctggagttgccagaggccatagcc
aaggcgtcatcccacaaacagttggaatccatctctcatatgggtgtggagttctggagt
tcccagttaaactttcgtggtcctcggaatggtcctccacctgtacctgatgcacctgta
ctcccaaatcctaaaccacaacattctaccgcatctactagcaccagtacaacattgttc
caggagttctgcccaattcacaccagaagtccttctgaacttgatttgggagcagggcag
ggagctttatgcttcatcaacccactattcctacaagagcatcccattcgtggtgccatg
cacaagcgccatcactttaaacgcagcataaaggttcgggtctccactgaaaactccagt
tcactctcaccccctgtcaccccaccaccacctccaccactacttgcaaaagccaagtgt
aaaggaaagaatgtgcagcaaaatgaagtggttcagagcaacgaggaggataagaacaat
gctgaagttgttgagggagattcagattatgtacagccttgtcttgctctcccaaagaag
acttctgcattagtcaccacgaccctctctccaacagctgaggaggaggactaccagttg
cccaaagcacttctgcaggcacaaagaaaaatcacagtggagagtgaagaagaaaatgag
gatgaagacattggactagtacttgagaaaagaaaggcaccatccctcaccgagttggac
agcagcagctcccttagcagccttgatgagactgaggagagtcctcagaagccttccctc
acacggggcactagtaaccctatcatcccctctcctcatcctccccaccagtctgtttcg
gccctgcgaaaaatgagtgcagcctttgtgtccttctttgtgccagggaagagagtcata
cggctggtggaagacctttctcatgacaggcgtatggcatttggggctctggtacaggac
ttcctgagggagcaaagggaagtgttgaagccacagtgcctgacaaccactgtggagctg
ctgcagggtttgcgtctctttatcaaccaggctaaggtgttcctcttggagtgtggagag
cttgaaccccccattgagaccctagtgcctgaggatgagaaagatcagacactggaaaaa
gccctgttccgctgtgtactaaaacctctgaaagggcagattgatacagcactctataat
gtgcgcgaacatgatggctcctttaagagactggctgaaagtatgaagacagccagagat
gcttctccacgagacctttttggagtccaggtggctgtgcctgatgctcatggcattgag
aagataaagcacaaaatgtctctcatgagacgtgcctattcacccattgacaaagtagtt
ttgctcctgcagatctgtaagctcatctataaagccatgaagactaatactggccaggag
tttggagctgatgacttccttccagctctttcctatgtgatagtgcagtgcaacatgcct
gagctttctctagaggtggagtacatgatggagctgctagaaacctcttggctcacagga
gagggtggatactatctgaccagcgtttatgccagccttagctatatacagagtgagcca
gaagctgtaccttctagtggacttacccaccaagtcaaagaatccctgaaggagtggagc
caccgtcgtagcacagagtccaagagccagaatgccataaaacagaggtttgtaaaggtg
ctgtttcaagatggagagtgcagtttggtgaagacattgcagtggaaggcagggttcagt
ggagaagctttggcacaactctgcgccatcaaatttggagtggaccagccagacgagtat
ggcctgtactggagaagtagtggaaagttaataccagtttccctggaagatcagattcag
gacctgcagaacgtgggtaccagcagtgctccactcatttaccagcactccaatcaggat
atgaaatccagtagattgaccagaggcggagctttggacctttcaggggaagcctcataa
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